| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487266
Identifier: 103487266
GI number: 103487266
Start: 1878884
End: 1879234
Strand: Reverse
Name: 103487266
Synonym: Sala_1782
Alternate gene names: NA
Gene position: 1879234-1878884 (Counterclockwise)
Preceding gene: 103487267
Following gene: 103487264
Centisome position: 56.18
GC content: 62.96
Gene sequence:
>351_bases ATGGCCTATTTGCTTCTGAAGGCTGCCTTGTCGGGCTTGATCATCGCGATCGTCAGTGAAGTTGCCCGCCGCGCGCCAGG GCTTGGCGCACTGATCGCATCGCTGCCGCTGATCTCGGTGCTGGGGATGATCTGGCTGTGGCGCGATACGCAGGATACTG CGCGCATGGCCGAACACGCCACCGCGACCTTCTGGTTCGTGTTGCCCAGCCTGCCGATGTTCCTGGTGATCCCGCTGCTA CTCAATCGTGGCATCGGGTTCTGGAGTGCGCTGGCCATCGGCTGCGCGCTGACCGTGGCGCTCTATCTGGTGATGGTGTG GGCGCTCGGCCAGTTCGGCGTGAAGCTATGA
Upstream 100 bases:
>100_bases GCTACCCGCGCTTTATCTCAAGGTCACGCGCGATGGCTGGGGCGTGAAATGGCCTGCACGGCGGCGCGCAGAGAGTGCCG CGTAAGGAAGGAGCATTGCG
Downstream 100 bases:
>100_bases CAGCGCGGCCCGATACCGCGCGTCCACCACCTCCCAATCCAGATTGGCCATGAAGGCATCGACATATTTCGCTGCCGCGG CCCCGTAGTCCATGTGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MAYLLLKAALSGLIIAIVSEVARRAPGLGALIASLPLISVLGMIWLWRDTQDTARMAEHATATFWFVLPSLPMFLVIPLL LNRGIGFWSALAIGCALTVALYLVMVWALGQFGVKL
Sequences:
>Translated_116_residues MAYLLLKAALSGLIIAIVSEVARRAPGLGALIASLPLISVLGMIWLWRDTQDTARMAEHATATFWFVLPSLPMFLVIPLL LNRGIGFWSALAIGCALTVALYLVMVWALGQFGVKL >Mature_115_residues AYLLLKAALSGLIIAIVSEVARRAPGLGALIASLPLISVLGMIWLWRDTQDTARMAEHATATFWFVLPSLPMFLVIPLLL NRGIGFWSALAIGCALTVALYLVMVWALGQFGVKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12552; Mature: 12421
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYLLLKAALSGLIIAIVSEVARRAPGLGALIASLPLISVLGMIWLWRDTQDTARMAEHA CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TATFWFVLPSLPMFLVIPLLLNRGIGFWSALAIGCALTVALYLVMVWALGQFGVKL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AYLLLKAALSGLIIAIVSEVARRAPGLGALIASLPLISVLGMIWLWRDTQDTARMAEHA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TATFWFVLPSLPMFLVIPLLLNRGIGFWSALAIGCALTVALYLVMVWALGQFGVKL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA