| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487250
Identifier: 103487250
GI number: 103487250
Start: 1861545
End: 1862567
Strand: Reverse
Name: 103487250
Synonym: Sala_1765
Alternate gene names: NA
Gene position: 1862567-1861545 (Counterclockwise)
Preceding gene: 103487251
Following gene: 103487248
Centisome position: 55.68
GC content: 68.62
Gene sequence:
>1023_bases ATGCCGCCGACCTTGTCAGCGCGTGGATCAGGGAGAAGCTGTGACGTGACGGCGGACGCCGACATCATCGACGACCTGCG CGCCGCCGGGCTGGTGGGTGCGGGCGATATTGTGCTCGAACCGCTCACCGGCGGTGTGTCGTGCGATGTGTGGAAGGTCG ATGCGCCGACCGGGCCGATCGTCGTCAAACGCCCGCTCGAACGATTGCGCGTCGCTGCCGAATGGCACGCGCCGATCGAG CGCGGGCAGAGCGAGGTGCGCTGGCTCAGACGCGCGCGCAGCGTCGATCCCGCGATTGCGCCCGAAGTGCTCGCCGAACT GCCCGGCTATGGCTTTGCGATGCGCTTCCTGCCGGACGCGCCGGTCTGGAAGGACGAGCTGATCGCGGGGCGCGTCGATG TCGCTTTTGCCGCCGCGGTGGGGCGAAGCCTCGCCGCGGTCCATTCGGCCACCGCAAACAGCCCCGCCGATCGGCACGCC TTTGCGACCGACGCCATGTTCCGCGCGCTGCGCATCGACCCCTTCCTGCTGTACGTGGCGCAGAAGGAGGCCGAGATGGC GCCGGCGCTTTACGCGCTCGCCGACGATCTGGCGGCGCGCAAGATTGCGCTCGTCCATGGCGACGTCAGCCCCAAGAATA TCCTCGTCGGCAAGGATGGCCCCGTCTTTCTCGACGCCGAATGCGCCGTCTATGGCGATCCAGCGTTCGATCTCGCCTTC TGCACGACGCATCTGCTCCTGAAGGCGGTGTGGCTTGACGATCCCCGCCTGACCGAAGCCGCGCATGCGCTGGTCGCGGC CTATCGTGCTGCTACCGACTGGGAGGATGACGCCGACCTGCTGCGCCGTGCAGGCGGGCTGACCGCCGCGCTGCTCCTCG CCCGCGTCGAGGGAAAATCGCCCGCGCCCTATCTCACCGACCCCCGGCATCGGCGCATCGTGCGCGAACAGGTGCGCGCG TGGCTGCTCGGGCCGCAGCCGGTCGACGTCGTGGTCGCCCAATGGAAAAGGACATCGGCATGA
Upstream 100 bases:
>100_bases GACGCGCGCAAGATCTTCGATTTCCCCGGCGGCCGCGACAAACGGCTCGAACTGAGCCCCGCCGCGCATTATTTCGGGGA TTCGATCGAGGAACGGCAAA
Downstream 100 bases:
>100_bases CGTCGCGTATCGCATCGGTCACGGGTCGCTCGCTCCGGGATTCGGGGGGCGCCCGACCGTCGCGGCCGGGGTCCTGCCCG AATCGGGGGCGATCGGGCGC
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Aminoglycoside Phosphotransferase Protein
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MPPTLSARGSGRSCDVTADADIIDDLRAAGLVGAGDIVLEPLTGGVSCDVWKVDAPTGPIVVKRPLERLRVAAEWHAPIE RGQSEVRWLRRARSVDPAIAPEVLAELPGYGFAMRFLPDAPVWKDELIAGRVDVAFAAAVGRSLAAVHSATANSPADRHA FATDAMFRALRIDPFLLYVAQKEAEMAPALYALADDLAARKIALVHGDVSPKNILVGKDGPVFLDAECAVYGDPAFDLAF CTTHLLLKAVWLDDPRLTEAAHALVAAYRAATDWEDDADLLRRAGGLTAALLLARVEGKSPAPYLTDPRHRRIVREQVRA WLLGPQPVDVVVAQWKRTSA
Sequences:
>Translated_340_residues MPPTLSARGSGRSCDVTADADIIDDLRAAGLVGAGDIVLEPLTGGVSCDVWKVDAPTGPIVVKRPLERLRVAAEWHAPIE RGQSEVRWLRRARSVDPAIAPEVLAELPGYGFAMRFLPDAPVWKDELIAGRVDVAFAAAVGRSLAAVHSATANSPADRHA FATDAMFRALRIDPFLLYVAQKEAEMAPALYALADDLAARKIALVHGDVSPKNILVGKDGPVFLDAECAVYGDPAFDLAF CTTHLLLKAVWLDDPRLTEAAHALVAAYRAATDWEDDADLLRRAGGLTAALLLARVEGKSPAPYLTDPRHRRIVREQVRA WLLGPQPVDVVVAQWKRTSA >Mature_339_residues PPTLSARGSGRSCDVTADADIIDDLRAAGLVGAGDIVLEPLTGGVSCDVWKVDAPTGPIVVKRPLERLRVAAEWHAPIER GQSEVRWLRRARSVDPAIAPEVLAELPGYGFAMRFLPDAPVWKDELIAGRVDVAFAAAVGRSLAAVHSATANSPADRHAF ATDAMFRALRIDPFLLYVAQKEAEMAPALYALADDLAARKIALVHGDVSPKNILVGKDGPVFLDAECAVYGDPAFDLAFC TTHLLLKAVWLDDPRLTEAAHALVAAYRAATDWEDDADLLRRAGGLTAALLLARVEGKSPAPYLTDPRHRRIVREQVRAW LLGPQPVDVVVAQWKRTSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36648; Mature: 36517
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTLSARGSGRSCDVTADADIIDDLRAAGLVGAGDIVLEPLTGGVSCDVWKVDAPTGPI CCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCCCE VVKRPLERLRVAAEWHAPIERGQSEVRWLRRARSVDPAIAPEVLAELPGYGFAMRFLPDA EECCCHHHHHHHHHHHCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCC PVWKDELIAGRVDVAFAAAVGRSLAAVHSATANSPADRHAFATDAMFRALRIDPFLLYVA CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE QKEAEMAPALYALADDLAARKIALVHGDVSPKNILVGKDGPVFLDAECAVYGDPAFDLAF HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEECCCCEEEECCEEEECCCCHHHHH CTTHLLLKAVWLDDPRLTEAAHALVAAYRAATDWEDDADLLRRAGGLTAALLLARVEGKS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHCCCC PAPYLTDPRHRRIVREQVRAWLLGPQPVDVVVAQWKRTSA CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCHHCCCC >Mature Secondary Structure PPTLSARGSGRSCDVTADADIIDDLRAAGLVGAGDIVLEPLTGGVSCDVWKVDAPTGPI CCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCCCE VVKRPLERLRVAAEWHAPIERGQSEVRWLRRARSVDPAIAPEVLAELPGYGFAMRFLPDA EECCCHHHHHHHHHHHCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCC PVWKDELIAGRVDVAFAAAVGRSLAAVHSATANSPADRHAFATDAMFRALRIDPFLLYVA CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE QKEAEMAPALYALADDLAARKIALVHGDVSPKNILVGKDGPVFLDAECAVYGDPAFDLAF HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEECCCCEEEECCEEEECCCCHHHHH CTTHLLLKAVWLDDPRLTEAAHALVAAYRAATDWEDDADLLRRAGGLTAALLLARVEGKS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHCCCC PAPYLTDPRHRRIVREQVRAWLLGPQPVDVVVAQWKRTSA CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA