| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487206
Identifier: 103487206
GI number: 103487206
Start: 1811903
End: 1812478
Strand: Reverse
Name: 103487206
Synonym: Sala_1721
Alternate gene names: NA
Gene position: 1812478-1811903 (Counterclockwise)
Preceding gene: 103487207
Following gene: 103487205
Centisome position: 54.18
GC content: 70.49
Gene sequence:
>576_bases ATGGCTATTGACCGACGCGGCTGGCTGCCGCTCGTCGCGCTGACCCTGTGGCCGGGCGTGGCAGCGGCGCAGTTGCCGGC GCTCGGCCCGGCGGTCGAGCGGGTCGCGTCGAAGGCGACGGGCGTCGCGGCCGCCGACGAACGCGCGGCGATGGCGCGCT TCGCCGCCTATGTGATGGCGCTGGCGAAGCGCGATTATGCAAGCGCCTATGCGATGCTGCGCCTGTCGTTCCAGGCGGCA AACCCGCGGCTCGAATGGGAGATGAACCTGCGCAAGCGGCCCGTGCTGTGGGCCGACGGGACGCTGCGCGTGCTGCGGCT GAGCTGGTATTCGGACCCGGCAGGCCAACCACCGGGCCTGTATGCCGCCTTCGATTTTCGCGGCGACCGCGCCGACGGGA CGATGGATTGCGGTTATGTCGTCGTCCACCGCGCCGTGCCCGACGCGGCTTGGACCGTGGTGCGCACCGACACGTCCGAG GTGCCGCCGGAGCTGATCGAGGAGGGCGTGCCCAAGGCCGACGTGCTGCGCCAGCTTCCCTGTTATCTGGGCAAGGGGAT TGCGACGGCGTTCTGA
Upstream 100 bases:
>100_bases CAGGGCATGGCGCCGCGCTATCCGAAACTCGCCGCCTTCGTGAACGCCTGCCATGCGCGCCCCGCGTGGCAGCGCGCGCG CGCGAAAGGCGGCGCCTATT
Downstream 100 bases:
>100_bases GCGGTGTGGGCGATCGCCTCCATCGCGACGAAGCGGCTTGTCGCACCGCCGCAAAATGCCTAATTCGCGCGCATGACATC GACCAACGACATTCGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MAIDRRGWLPLVALTLWPGVAAAQLPALGPAVERVASKATGVAAADERAAMARFAAYVMALAKRDYASAYAMLRLSFQAA NPRLEWEMNLRKRPVLWADGTLRVLRLSWYSDPAGQPPGLYAAFDFRGDRADGTMDCGYVVVHRAVPDAAWTVVRTDTSE VPPELIEEGVPKADVLRQLPCYLGKGIATAF
Sequences:
>Translated_191_residues MAIDRRGWLPLVALTLWPGVAAAQLPALGPAVERVASKATGVAAADERAAMARFAAYVMALAKRDYASAYAMLRLSFQAA NPRLEWEMNLRKRPVLWADGTLRVLRLSWYSDPAGQPPGLYAAFDFRGDRADGTMDCGYVVVHRAVPDAAWTVVRTDTSE VPPELIEEGVPKADVLRQLPCYLGKGIATAF >Mature_190_residues AIDRRGWLPLVALTLWPGVAAAQLPALGPAVERVASKATGVAAADERAAMARFAAYVMALAKRDYASAYAMLRLSFQAAN PRLEWEMNLRKRPVLWADGTLRVLRLSWYSDPAGQPPGLYAAFDFRGDRADGTMDCGYVVVHRAVPDAAWTVVRTDTSEV PPELIEEGVPKADVLRQLPCYLGKGIATAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20803; Mature: 20672
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDRRGWLPLVALTLWPGVAAAQLPALGPAVERVASKATGVAAADERAAMARFAAYVMA CCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LAKRDYASAYAMLRLSFQAANPRLEWEMNLRKRPVLWADGTLRVLRLSWYSDPAGQPPGL HHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCEEEECCCEEEEEEEECCCCCCCCCCE YAAFDFRGDRADGTMDCGYVVVHRAVPDAAWTVVRTDTSEVPPELIEEGVPKADVLRQLP EEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHCCCCHHHHHHHHH CYLGKGIATAF HHHCCCHHHCC >Mature Secondary Structure AIDRRGWLPLVALTLWPGVAAAQLPALGPAVERVASKATGVAAADERAAMARFAAYVMA CCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LAKRDYASAYAMLRLSFQAANPRLEWEMNLRKRPVLWADGTLRVLRLSWYSDPAGQPPGL HHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCEEEECCCEEEEEEEECCCCCCCCCCE YAAFDFRGDRADGTMDCGYVVVHRAVPDAAWTVVRTDTSEVPPELIEEGVPKADVLRQLP EEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHCCCCHHHHHHHHH CYLGKGIATAF HHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA