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The map label for this gene is yijC [C]

Identifier: 103487181

GI number: 103487181

Start: 1787227

End: 1787835

Strand: Reverse

Name: yijC [C]

Synonym: Sala_1696

Alternate gene names: 103487181

Gene position: 1787835-1787227 (Counterclockwise)

Preceding gene: 103487185

Following gene: 103487180

Centisome position: 53.45

GC content: 67.65

Gene sequence:

>609_bases
ATGATGCACAGCAAAGATAACAGTGTCAACATAAAAGAGAGCGGCGCCAAGGCGGCGGGCGCCTATCACCATGGCGATCT
GCGCGCGGCGGTGATCGCCGCAGGGCTGAAACGGCTGGCCGAGGGCGACGGTGGCGAATTGGGTCTGCGCGCTCTCGCAC
GCGACGTCGGGGTCAGCGCCACCGCGCTTTACCGCCATTTCCCCGACAAGGAGGCGCTGCTTGACGCGCTCGCCGACGAA
GGGTTGCGGCGGCTGGGTGCGCTCCAGGCGCAGGCGTGGCTGAAGGCAGGAGGTGGCGTTGCGGGCTTCAAGGCGACGGG
CATCGCCTATGTCCGCTTCGCCCACGACGAACCGGCGCTGTTCCGGCTGAGTTTCACGCGCCAGATGAGTCAGCGAAGCA
TGGGCAGCGATGGCGGCGAGGTGGCCTATAATCTGCTTCGTGCCGGGGTCGGCGAAGCGCTGCCTGGCGCCGCCGATCCC
GACACGGCGGCGCTCCACGCCTGGGCGCTGGTACATGGGCTGGCAATGCTGATCCTCGACCGGCGGATCGAATGGGATGA
GGCGCGCGTCGCCGAAGTCGTCGGCCTGACCTTTGGCGGCGTGGGGTGA

Upstream 100 bases:

>100_bases
AGCGCGACGACAATGGCTAAACCAGCGGCGATGGCCGACCACGCGATCATTCGGGAACTCCAGCCTTGTCTATACGACTC
GAAATGTTTACAGCGAAAAC

Downstream 100 bases:

>100_bases
AGCGTGGCGCGGGCGCCGAAATCTTAGCGGTTTATTTTCCTGTTTCGGACTATCGGGTTGCATGATCCGGTCGCTGTCCC
CCAGAGTCGAAGCGGTCTTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MMHSKDNSVNIKESGAKAAGAYHHGDLRAAVIAAGLKRLAEGDGGELGLRALARDVGVSATALYRHFPDKEALLDALADE
GLRRLGALQAQAWLKAGGGVAGFKATGIAYVRFAHDEPALFRLSFTRQMSQRSMGSDGGEVAYNLLRAGVGEALPGAADP
DTAALHAWALVHGLAMLILDRRIEWDEARVAEVVGLTFGGVG

Sequences:

>Translated_202_residues
MMHSKDNSVNIKESGAKAAGAYHHGDLRAAVIAAGLKRLAEGDGGELGLRALARDVGVSATALYRHFPDKEALLDALADE
GLRRLGALQAQAWLKAGGGVAGFKATGIAYVRFAHDEPALFRLSFTRQMSQRSMGSDGGEVAYNLLRAGVGEALPGAADP
DTAALHAWALVHGLAMLILDRRIEWDEARVAEVVGLTFGGVG
>Mature_202_residues
MMHSKDNSVNIKESGAKAAGAYHHGDLRAAVIAAGLKRLAEGDGGELGLRALARDVGVSATALYRHFPDKEALLDALADE
GLRRLGALQAQAWLKAGGGVAGFKATGIAYVRFAHDEPALFRLSFTRQMSQRSMGSDGGEVAYNLLRAGVGEALPGAADP
DTAALHAWALVHGLAMLILDRRIEWDEARVAEVVGLTFGGVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21184; Mature: 21184

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHSKDNSVNIKESGAKAAGAYHHGDLRAAVIAAGLKRLAEGDGGELGLRALARDVGVSA
CCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH
TALYRHFPDKEALLDALADEGLRRLGALQAQAWLKAGGGVAGFKATGIAYVRFAHDEPAL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEEECCCCCE
FRLSFTRQMSQRSMGSDGGEVAYNLLRAGVGEALPGAADPDTAALHAWALVHGLAMLILD
EEHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RRIEWDEARVAEVVGLTFGGVG
HCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMHSKDNSVNIKESGAKAAGAYHHGDLRAAVIAAGLKRLAEGDGGELGLRALARDVGVSA
CCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH
TALYRHFPDKEALLDALADEGLRRLGALQAQAWLKAGGGVAGFKATGIAYVRFAHDEPAL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEEECCCCCE
FRLSFTRQMSQRSMGSDGGEVAYNLLRAGVGEALPGAADPDTAALHAWALVHGLAMLILD
EEHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RRIEWDEARVAEVVGLTFGGVG
HCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA