| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is msuD [H]
Identifier: 103487145
GI number: 103487145
Start: 1745320
End: 1746408
Strand: Reverse
Name: msuD [H]
Synonym: Sala_1660
Alternate gene names: 103487145
Gene position: 1746408-1745320 (Counterclockwise)
Preceding gene: 103487146
Following gene: 103487144
Centisome position: 52.21
GC content: 62.63
Gene sequence:
>1089_bases ATGACCCAACAGCAATGCGAGATCGCCTGGTTCTCGGCGCTCTGCGATGACGACTATGAATTTTTGGGCGTCGCCGATCC CTATCTGCGCTCGAGCTGGGAACACTGCCGCAATATCGTTCTGCGCGCCGAAGAAGGGGGATTCGACAATATCCTGCTCC CCTCGGGCTATCAACTTGGGCTCGACACGACCGTTTTTGCGGCCGCTGTTGCGACAGAGGTGCGGCGAATGAAGCTTCTC TGGGCGACGCGCATCGGCGAGGACTGGCCGCCGCAGCTCGCGCGCCGCATAGCGACGCTCGACCGCATCCTCGGTCCCAA TGCGGCGGGCACCGGAGGGCGGCTCAATGTCAATATCATCTCGTCGGATATGCCCGGCCAGCAGTTGGCGGGGGGACCGC GCTACGCACGCGCGACCGAGGTTATGAAGATTGTGCGGACCCTGCTCAACGGCGAGGCGCTCGACCATGACGGCGAATTC TATCAATTGAAGCTCGAACCGCCGCGCATCACGACGCTGTCGGGCAAATGCCCGCCCTTCTATTTCGGCGGGTTGAGCCA TGAGGCGCGCGAATGTGCGGCCGAGGGCTGTGACGTTTATCTCATGTGGCCCGATACGATGGACAAGGTCCGCGAAACGA TCGCCGACATGCGCGAACGCGCGGCGCGGTTCGGGCGCCAATTGAAGTTCGGATACCGCGTCCATGTCATCGTGCGTGAA ACCGAGGAGGAAGCGCGCCTCTATGCCGATCGTCTGCTGTCGAAGCTCGATGAGGCGACGGGCGCGGCGATCCGCGAAAA ATCGCTCGATGCCAAAAATTACGGGGTTCAGCGTCAGGCCGAATTGCGGAGCGCAGCCGATGGCGACGGCTTTGTCGAGG AGAATCTCTGGACGGGGATCGGGCGCGCGCGATCGGGATGCGGCGCCGCGATCGTCGGAACCCCCGACCAGGTGCTTGCA AAACTTCGCGCCTATCAGGCCGAGGGCATCGAAGCCTTCATCCTGTCGGGCTATCCGCACGCACAGGAAGCCGATCTTTT TGCACGCCATGTGCTTCCGCACATCGCGCACGCGCCGCTGGAGTTGTAG
Upstream 100 bases:
>100_bases CCGCGCGCGGCGCCGCGTTGCCCTGAACCTGCGGCGCCGTCCGCCGCGCATGACAAGACCCTGCGAAACGAGGCGTCCCA GGGCATGGAGAGGAAGAGAC
Downstream 100 bases:
>100_bases AAAGAGGAGGCGTGCGGGTGTCCGCCGACATGTTCGACATCGCCATCATCGGCGGCGGGGTCAACGGCTGCGGGATCGCG CGCGATGCGGCGGGGCGGGG
Product: alkanesulfonate monooxygenase
Products: NA
Alternate protein names: FMNH2-dependent methanesulfonate monooxygenase; Methanesulfonate sulfonatase [H]
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MTQQQCEIAWFSALCDDDYEFLGVADPYLRSSWEHCRNIVLRAEEGGFDNILLPSGYQLGLDTTVFAAAVATEVRRMKLL WATRIGEDWPPQLARRIATLDRILGPNAAGTGGRLNVNIISSDMPGQQLAGGPRYARATEVMKIVRTLLNGEALDHDGEF YQLKLEPPRITTLSGKCPPFYFGGLSHEARECAAEGCDVYLMWPDTMDKVRETIADMRERAARFGRQLKFGYRVHVIVRE TEEEARLYADRLLSKLDEATGAAIREKSLDAKNYGVQRQAELRSAADGDGFVEENLWTGIGRARSGCGAAIVGTPDQVLA KLRAYQAEGIEAFILSGYPHAQEADLFARHVLPHIAHAPLEL
Sequences:
>Translated_362_residues MTQQQCEIAWFSALCDDDYEFLGVADPYLRSSWEHCRNIVLRAEEGGFDNILLPSGYQLGLDTTVFAAAVATEVRRMKLL WATRIGEDWPPQLARRIATLDRILGPNAAGTGGRLNVNIISSDMPGQQLAGGPRYARATEVMKIVRTLLNGEALDHDGEF YQLKLEPPRITTLSGKCPPFYFGGLSHEARECAAEGCDVYLMWPDTMDKVRETIADMRERAARFGRQLKFGYRVHVIVRE TEEEARLYADRLLSKLDEATGAAIREKSLDAKNYGVQRQAELRSAADGDGFVEENLWTGIGRARSGCGAAIVGTPDQVLA KLRAYQAEGIEAFILSGYPHAQEADLFARHVLPHIAHAPLEL >Mature_361_residues TQQQCEIAWFSALCDDDYEFLGVADPYLRSSWEHCRNIVLRAEEGGFDNILLPSGYQLGLDTTVFAAAVATEVRRMKLLW ATRIGEDWPPQLARRIATLDRILGPNAAGTGGRLNVNIISSDMPGQQLAGGPRYARATEVMKIVRTLLNGEALDHDGEFY QLKLEPPRITTLSGKCPPFYFGGLSHEARECAAEGCDVYLMWPDTMDKVRETIADMRERAARFGRQLKFGYRVHVIVRET EEEARLYADRLLSKLDEATGAAIREKSLDAKNYGVQRQAELRSAADGDGFVEENLWTGIGRARSGCGAAIVGTPDQVLAK LRAYQAEGIEAFILSGYPHAQEADLFARHVLPHIAHAPLEL
Specific function: Catalyzes the desulfonation of aliphatic sulfonates. Shows highest activity with methanesulfonate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SsuD family [H]
Homologues:
Organism=Escherichia coli, GI1787166, Length=342, Percent_Identity=34.7953216374269, Blast_Score=184, Evalue=6e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019911 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.14.5 [H]
Molecular weight: Translated: 40183; Mature: 40052
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQQCEIAWFSALCDDDYEFLGVADPYLRSSWEHCRNIVLRAEEGGFDNILLPSGYQLG CCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHEEEECCCCCCCEECCCCCCCC LDTTVFAAAVATEVRRMKLLWATRIGEDWPPQLARRIATLDRILGPNAAGTGGRLNVNII CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE SSDMPGQQLAGGPRYARATEVMKIVRTLLNGEALDHDGEFYQLKLEPPRITTLSGKCPPF ECCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCC YFGGLSHEARECAAEGCDVYLMWPDTMDKVRETIADMRERAARFGRQLKFGYRVHVIVRE EECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEEC TEEEARLYADRLLSKLDEATGAAIREKSLDAKNYGVQRQAELRSAADGDGFVEENLWTGI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCCCCCCHHHHHHHHH GRARSGCGAAIVGTPDQVLAKLRAYQAEGIEAFILSGYPHAQEADLFARHVLPHIAHAPL HHHCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCC EL CC >Mature Secondary Structure TQQQCEIAWFSALCDDDYEFLGVADPYLRSSWEHCRNIVLRAEEGGFDNILLPSGYQLG CCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHEEEECCCCCCCEECCCCCCCC LDTTVFAAAVATEVRRMKLLWATRIGEDWPPQLARRIATLDRILGPNAAGTGGRLNVNII CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE SSDMPGQQLAGGPRYARATEVMKIVRTLLNGEALDHDGEFYQLKLEPPRITTLSGKCPPF ECCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCC YFGGLSHEARECAAEGCDVYLMWPDTMDKVRETIADMRERAARFGRQLKFGYRVHVIVRE EECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEEC TEEEARLYADRLLSKLDEATGAAIREKSLDAKNYGVQRQAELRSAADGDGFVEENLWTGI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCCCCCCHHHHHHHHH GRARSGCGAAIVGTPDQVLAKLRAYQAEGIEAFILSGYPHAQEADLFARHVLPHIAHAPL HHHCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCC EL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10049377; 10984043 [H]