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The map label for this gene is glpD [H]

Identifier: 103487144

GI number: 103487144

Start: 1743815

End: 1745290

Strand: Reverse

Name: glpD [H]

Synonym: Sala_1659

Alternate gene names: 103487144

Gene position: 1745290-1743815 (Counterclockwise)

Preceding gene: 103487145

Following gene: 103487143

Centisome position: 52.17

GC content: 65.72

Gene sequence:

>1476_bases
ATGTTCGACATCGCCATCATCGGCGGCGGGGTCAACGGCTGCGGGATCGCGCGCGATGCGGCGGGGCGGGGCGCGCGCGT
TCTGTTGCTCGAAGCGCAGGATCTGGCGAGCGGAACGTCATCGGCATCGACCAAGCTGATCCATGGCGGACTTCGCTATC
TCGAACACCATGAGTTCGGCCTGGTCCGCGAATCGCTTTCGGAACGCGAGCGTCTGTGGGCGATCGCGCCGCATATCGTG
CGACCGATGCGCTTCGTGCTGCCCCATGTGGCCGGATTGCGTCCGCGATGGCTCCTGCGCCTGGGACTGTTTCTTTATGA
CCATATCGGCGGACGGAAACGTCTTCCCGCCACCGAAACGATCGCCTTGCGCGATCATGTCGCGGGCGCGCCGCTGAAGA
ACGGGTTTACGTCGGGCTTTGCCTATTCGGACTGCTGGGTCGATGACGCGCGGCTGGTTCTTCTCAATGCGCGCGACGCG
GCCGACCGCGGGGCGGATATTCGCCCGCGCTGCCGTGTCACGCGCTTCGCGCGGACCGGCGACCATTGGACGCTCGATAC
GCCGGGCGGGCAGTTTCACGCGCATGTCATCGTCAACGCGGCCGGCCCCGCGGCGCTCGAAGTTTCGCAACTGGGCGGCG
TGGCGACCGGCCGCCGCGTGCGGCTCGTCCGCGGCTCGCATATCGTCGTGCCCAGGCTCTTCGACCACCACTACAGCTAT
TTTTTCCAGCTTCCCGACGGGCGGATATTTTTCGCCATCCCCTATGAGCGCGACTTCACGCTGATCGGCACGACCGATCG
TGACCATGACGGCGCTCTGACCGATGTGCGCGCTTCCGATGAGGAGATCGCCTATCTGTGCGAGGGGGCCAATCGCTTCT
TTCGCAAGACGATCTCGCCGGCCGATGTGACCTGGAGCTATGCAGGGGTGCGGCCGCTGGTCGACGATGGATCGGGACGG
CCCGAGGCGGCGACGCGCGGCTATGATCTGGATCTCTCGTCGGAGAGCGACGGTCCGGCGCTGCTTTCGGTCTTTGGCGG
CAAGATCACCACCTATCGCCGCCTTGCCGAAGACGCGGTCGATCTGCTTGCGCGCCGCCTGCCCGCATTGACGGGGACCC
GCTGGACCGGCGATGTGCCGCTCCCCGGTGGAGATTTTGCGATCGACGGGTTTGCCGACCTCGCCCAATCGCTGGGCCGC
CGCTATGCTTTTCTGCAACCGCCGTGGACCGAACGCCTTGCGCGCAGCTACGGCACCAGGGCGTTTGACATTCTGGGCGG
CGTCTCGCGGTTCGAGGATTGCGGGCGGCATTATGGCTCTGGACTCACCGACCGCGAGGTCGCCTATCTCGTCGAGCAGG
AATGGTGCCGCACGGTCGAGGATCTGCTTTGGCGCCGCAGCAAGCTGGGGCTGCATCTCGACGCCGCGGCGCGGCGTTTG
CTTGCCGCCGCTTTTGAAGAAAGGGAATGCGCGTGA

Upstream 100 bases:

>100_bases
ACGCACAGGAAGCCGATCTTTTTGCACGCCATGTGCTTCCGCACATCGCGCACGCGCCGCTGGAGTTGTAGAAAGAGGAG
GCGTGCGGGTGTCCGCCGAC

Downstream 100 bases:

>100_bases
GTATCAACATCGTGGCCATCGGCGGCACCGTATCGCCGATCAGCGCGACCGAGCAGGCTCTCTGCGTCGCGGCGGCGCGC
GCAAAGGCAAAAGGCGCGCA

Product: glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MFDIAIIGGGVNGCGIARDAAGRGARVLLLEAQDLASGTSSASTKLIHGGLRYLEHHEFGLVRESLSERERLWAIAPHIV
RPMRFVLPHVAGLRPRWLLRLGLFLYDHIGGRKRLPATETIALRDHVAGAPLKNGFTSGFAYSDCWVDDARLVLLNARDA
ADRGADIRPRCRVTRFARTGDHWTLDTPGGQFHAHVIVNAAGPAALEVSQLGGVATGRRVRLVRGSHIVVPRLFDHHYSY
FFQLPDGRIFFAIPYERDFTLIGTTDRDHDGALTDVRASDEEIAYLCEGANRFFRKTISPADVTWSYAGVRPLVDDGSGR
PEAATRGYDLDLSSESDGPALLSVFGGKITTYRRLAEDAVDLLARRLPALTGTRWTGDVPLPGGDFAIDGFADLAQSLGR
RYAFLQPPWTERLARSYGTRAFDILGGVSRFEDCGRHYGSGLTDREVAYLVEQEWCRTVEDLLWRRSKLGLHLDAAARRL
LAAAFEERECA

Sequences:

>Translated_491_residues
MFDIAIIGGGVNGCGIARDAAGRGARVLLLEAQDLASGTSSASTKLIHGGLRYLEHHEFGLVRESLSERERLWAIAPHIV
RPMRFVLPHVAGLRPRWLLRLGLFLYDHIGGRKRLPATETIALRDHVAGAPLKNGFTSGFAYSDCWVDDARLVLLNARDA
ADRGADIRPRCRVTRFARTGDHWTLDTPGGQFHAHVIVNAAGPAALEVSQLGGVATGRRVRLVRGSHIVVPRLFDHHYSY
FFQLPDGRIFFAIPYERDFTLIGTTDRDHDGALTDVRASDEEIAYLCEGANRFFRKTISPADVTWSYAGVRPLVDDGSGR
PEAATRGYDLDLSSESDGPALLSVFGGKITTYRRLAEDAVDLLARRLPALTGTRWTGDVPLPGGDFAIDGFADLAQSLGR
RYAFLQPPWTERLARSYGTRAFDILGGVSRFEDCGRHYGSGLTDREVAYLVEQEWCRTVEDLLWRRSKLGLHLDAAARRL
LAAAFEERECA
>Mature_491_residues
MFDIAIIGGGVNGCGIARDAAGRGARVLLLEAQDLASGTSSASTKLIHGGLRYLEHHEFGLVRESLSERERLWAIAPHIV
RPMRFVLPHVAGLRPRWLLRLGLFLYDHIGGRKRLPATETIALRDHVAGAPLKNGFTSGFAYSDCWVDDARLVLLNARDA
ADRGADIRPRCRVTRFARTGDHWTLDTPGGQFHAHVIVNAAGPAALEVSQLGGVATGRRVRLVRGSHIVVPRLFDHHYSY
FFQLPDGRIFFAIPYERDFTLIGTTDRDHDGALTDVRASDEEIAYLCEGANRFFRKTISPADVTWSYAGVRPLVDDGSGR
PEAATRGYDLDLSSESDGPALLSVFGGKITTYRRLAEDAVDLLARRLPALTGTRWTGDVPLPGGDFAIDGFADLAQSLGR
RYAFLQPPWTERLARSYGTRAFDILGGVSRFEDCGRHYGSGLTDREVAYLVEQEWCRTVEDLLWRRSKLGLHLDAAARRL
LAAAFEERECA

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=517, Percent_Identity=29.7872340425532, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI285002231, Length=517, Percent_Identity=29.7872340425532, Blast_Score=176, Evalue=5e-44,
Organism=Escherichia coli, GI2367226, Length=457, Percent_Identity=45.9518599562363, Blast_Score=374, Evalue=1e-105,
Organism=Escherichia coli, GI1788574, Length=482, Percent_Identity=28.4232365145228, Blast_Score=100, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI115534726, Length=524, Percent_Identity=28.8167938931298, Blast_Score=154, Evalue=8e-38,
Organism=Caenorhabditis elegans, GI17509253, Length=519, Percent_Identity=29.0944123314065, Blast_Score=150, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6322036, Length=534, Percent_Identity=25.6554307116105, Blast_Score=134, Evalue=4e-32,
Organism=Drosophila melanogaster, GI161077125, Length=519, Percent_Identity=29.0944123314065, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24653942, Length=519, Percent_Identity=29.0944123314065, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24653944, Length=519, Percent_Identity=29.0944123314065, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI20130025, Length=519, Percent_Identity=29.0944123314065, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24586295, Length=450, Percent_Identity=28.8888888888889, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI19921278, Length=503, Percent_Identity=24.2544731610338, Blast_Score=95, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 54234; Mature: 54234

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS00977 FAD_G3PDH_1 ; PS00978 FAD_G3PDH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDIAIIGGGVNGCGIARDAAGRGARVLLLEAQDLASGTSSASTKLIHGGLRYLEHHEFG
CEEEEEECCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LVRESLSERERLWAIAPHIVRPMRFVLPHVAGLRPRWLLRLGLFLYDHIGGRKRLPATET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE
IALRDHVAGAPLKNGFTSGFAYSDCWVDDARLVLLNARDAADRGADIRPRCRVTRFARTG
EEEHHHCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCCHHHEEHEECC
DHWTLDTPGGQFHAHVIVNAAGPAALEVSQLGGVATGRRVRLVRGSHIVVPRLFDHHYSY
CCEEEECCCCCEEEEEEEECCCCCEEEHHHHCCCCCCCEEEEEECCEEEECHHHHCCCEE
FFQLPDGRIFFAIPYERDFTLIGTTDRDHDGALTDVRASDEEIAYLCEGANRFFRKTISP
EEECCCCEEEEEECCCCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCC
ADVTWSYAGVRPLVDDGSGRPEAATRGYDLDLSSESDGPALLSVFGGKITTYRRLAEDAV
CCCEEECCCCCEECCCCCCCCCHHCCCCCEECCCCCCCCEEHHHHCCCHHHHHHHHHHHH
DLLARRLPALTGTRWTGDVPLPGGDFAIDGFADLAQSLGRRYAFLQPPWTERLARSYGTR
HHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHCCCEEECCCCHHHHHHHHHCCH
AFDILGGVSRFEDCGRHYGSGLTDREVAYLVEQEWCRTVEDLLWRRSKLGLHLDAAARRL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHH
LAAAFEERECA
HHHHHHHCCCC
>Mature Secondary Structure
MFDIAIIGGGVNGCGIARDAAGRGARVLLLEAQDLASGTSSASTKLIHGGLRYLEHHEFG
CEEEEEECCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LVRESLSERERLWAIAPHIVRPMRFVLPHVAGLRPRWLLRLGLFLYDHIGGRKRLPATET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE
IALRDHVAGAPLKNGFTSGFAYSDCWVDDARLVLLNARDAADRGADIRPRCRVTRFARTG
EEEHHHCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCCHHHEEHEECC
DHWTLDTPGGQFHAHVIVNAAGPAALEVSQLGGVATGRRVRLVRGSHIVVPRLFDHHYSY
CCEEEECCCCCEEEEEEEECCCCCEEEHHHHCCCCCCCEEEEEECCEEEECHHHHCCCEE
FFQLPDGRIFFAIPYERDFTLIGTTDRDHDGALTDVRASDEEIAYLCEGANRFFRKTISP
EEECCCCEEEEEECCCCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCC
ADVTWSYAGVRPLVDDGSGRPEAATRGYDLDLSSESDGPALLSVFGGKITTYRRLAEDAV
CCCEEECCCCCEECCCCCCCCCHHCCCCCEECCCCCCCCEEHHHHCCCHHHHHHHHHHHH
DLLARRLPALTGTRWTGDVPLPGGDFAIDGFADLAQSLGRRYAFLQPPWTERLARSYGTR
HHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHCCCEEECCCCHHHHHHHHHCCH
AFDILGGVSRFEDCGRHYGSGLTDREVAYLVEQEWCRTVEDLLWRRSKLGLHLDAAARRL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHH
LAAAFEERECA
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8157588; 10984043 [H]