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The map label for this gene is yngJ [H]

Identifier: 103487118

GI number: 103487118

Start: 1714784

End: 1715875

Strand: Reverse

Name: yngJ [H]

Synonym: Sala_1633

Alternate gene names: 103487118

Gene position: 1715875-1714784 (Counterclockwise)

Preceding gene: 103487126

Following gene: 103487117

Centisome position: 51.29

GC content: 66.21

Gene sequence:

>1092_bases
ATGAATTTCGACCTCAGCGATGAACAGAAAATGCTCGGCGAGCAAGCCCGCGCGCTGCTTGCCGACCTCTCGCCCTTCGA
TCGCTTGCGCCAGCTGATCGATTCGGGCGCGGATTGGGACGAGCCCCTGTGGCGCGCGCTCGCCGAAATGGGGTTCCTGG
GGGCGGCGATCCCCGAAGAGCATGGGGGACTTGGCCTCGGCGCACTCGACCTCGGCGTTATCATGGAGGCGCTGGGTGCC
GCCAATGCCGCGGTGCCGTTCATGAGTTCGATCATCCTCGGAGCCGAAGCGATCCGGCTCGCGGGGAGCGATGCGCAGAA
AGCGGCCTGGCTGCCACGGCTCGCGTCGGGCGAGGCGGTGGCGACCTTCGCTTATGCCGAGGGGCCAGGGCCGGTCTTTG
CGACGGGTGCGCGACTCGAAGGCGGCAAGCTGTCGGGAAGCAAGTTCCCCGTCGCCGATGCGGGGATCGCCGATATTGCG
GTGGTGCTCGTCGCGGGGGGCGATCTCGCGCTCGTCGAGCTCGATCAGCCGGGGGTGACGCGGACTAAGCTCGACAGCTT
CGACCAGCTCCGCCCGCACTATCGCCTCGACTTCGATGCGGCGATGGCCGATCCGATGCCGGGCCGCGGAAAGCTCGACC
GGTTGATCGATCAGGCCGCGGTCCAGGCCGCATTTGAAGCTGCGGGCGCTGCCGAAGCCTGTCTCTACATGGCCCGCGAT
TATGCCTTGGAGCGCCAGATTTTCGGTCGCTCGCTCGCCAGTTTCCAGGCGATCAAACACAAGCTGGCCGATGTGGCGGT
GGCGACCGAGCTTGCACGGTCGAACGCCTATTTCGGTGGCTGGGCGGCTCAATCCTCACCCGATGACCTGCCTGCGGCGG
CGGCGGCGGCGCGGCTTTCGGGCATCAAATGTTTCGAGATGGCGGCCCGCGAGAATCTTCAGGTGCACGGCGGCATCGGA
TATACGTTCGAAGCCAACTGTCACTTCTATTACCGCCGCGAACGGATGCTTGCGGTGCATCTCGGCAATCGGGGTTTTTG
GGCAAACCGGCTGCTCGCCGCGCAGCCCGGGCGCCAGGGTCAGGCGGCCTGA

Upstream 100 bases:

>100_bases
CATATTGCATAGCCAGCGACTCCTTCCCGGTGTTTGTCATGGTTGACCTAGTTATACAACTCGCTATGACACGGATCGCA
ACAACAGGGCAAGCCTTCCG

Downstream 100 bases:

>100_bases
GGAGGGCAGGATAATGGATTTCAACGACAGCCCCGAAGAAGCCGCCTTTCGCGCCGAAGCGCGCGCCTGGCTCGCCGCCC
ACGCCCCGGCGCATGAAATC

Product: acyl-CoA dehydrogenase-like protein

Products: gamma-butyrobetaine; Acceptor; gamma-butyrobetainyl-CoA [C]

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MNFDLSDEQKMLGEQARALLADLSPFDRLRQLIDSGADWDEPLWRALAEMGFLGAAIPEEHGGLGLGALDLGVIMEALGA
ANAAVPFMSSIILGAEAIRLAGSDAQKAAWLPRLASGEAVATFAYAEGPGPVFATGARLEGGKLSGSKFPVADAGIADIA
VVLVAGGDLALVELDQPGVTRTKLDSFDQLRPHYRLDFDAAMADPMPGRGKLDRLIDQAAVQAAFEAAGAAEACLYMARD
YALERQIFGRSLASFQAIKHKLADVAVATELARSNAYFGGWAAQSSPDDLPAAAAAARLSGIKCFEMAARENLQVHGGIG
YTFEANCHFYYRRERMLAVHLGNRGFWANRLLAAQPGRQGQAA

Sequences:

>Translated_363_residues
MNFDLSDEQKMLGEQARALLADLSPFDRLRQLIDSGADWDEPLWRALAEMGFLGAAIPEEHGGLGLGALDLGVIMEALGA
ANAAVPFMSSIILGAEAIRLAGSDAQKAAWLPRLASGEAVATFAYAEGPGPVFATGARLEGGKLSGSKFPVADAGIADIA
VVLVAGGDLALVELDQPGVTRTKLDSFDQLRPHYRLDFDAAMADPMPGRGKLDRLIDQAAVQAAFEAAGAAEACLYMARD
YALERQIFGRSLASFQAIKHKLADVAVATELARSNAYFGGWAAQSSPDDLPAAAAAARLSGIKCFEMAARENLQVHGGIG
YTFEANCHFYYRRERMLAVHLGNRGFWANRLLAAQPGRQGQAA
>Mature_363_residues
MNFDLSDEQKMLGEQARALLADLSPFDRLRQLIDSGADWDEPLWRALAEMGFLGAAIPEEHGGLGLGALDLGVIMEALGA
ANAAVPFMSSIILGAEAIRLAGSDAQKAAWLPRLASGEAVATFAYAEGPGPVFATGARLEGGKLSGSKFPVADAGIADIA
VVLVAGGDLALVELDQPGVTRTKLDSFDQLRPHYRLDFDAAMADPMPGRGKLDRLIDQAAVQAAFEAAGAAEACLYMARD
YALERQIFGRSLASFQAIKHKLADVAVATELARSNAYFGGWAAQSSPDDLPAAAAAARLSGIKCFEMAARENLQVHGGIG
YTFEANCHFYYRRERMLAVHLGNRGFWANRLLAAQPGRQGQAA

Specific function: Catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=328, Percent_Identity=29.2682926829268, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI7656849, Length=338, Percent_Identity=28.1065088757396, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI76496475, Length=378, Percent_Identity=25.3968253968254, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI4557235, Length=378, Percent_Identity=25.3968253968254, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI4557231, Length=388, Percent_Identity=26.5463917525773, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI187960098, Length=388, Percent_Identity=26.5463917525773, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI21361497, Length=363, Percent_Identity=26.4462809917355, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI4501859, Length=384, Percent_Identity=23.9583333333333, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI226958412, Length=349, Percent_Identity=26.647564469914, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI4501857, Length=330, Percent_Identity=23.030303030303, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI226958414, Length=310, Percent_Identity=26.1290322580645, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI1786223, Length=342, Percent_Identity=25.1461988304094, Blast_Score=78, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538396, Length=346, Percent_Identity=28.3236994219653, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17534899, Length=381, Percent_Identity=26.246719160105, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17508101, Length=376, Percent_Identity=23.936170212766, Blast_Score=88, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17569725, Length=385, Percent_Identity=25.1948051948052, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17570075, Length=399, Percent_Identity=27.0676691729323, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17506239, Length=374, Percent_Identity=22.9946524064171, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17534353, Length=302, Percent_Identity=27.1523178807947, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24646207, Length=373, Percent_Identity=26.8096514745308, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=27.3936170212766, Blast_Score=95, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24666513, Length=369, Percent_Identity=25.2032520325203, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24660351, Length=377, Percent_Identity=24.1379310344828, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI19920834, Length=278, Percent_Identity=28.4172661870504, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.- [C]

Molecular weight: Translated: 38493; Mature: 38493

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFDLSDEQKMLGEQARALLADLSPFDRLRQLIDSGADWDEPLWRALAEMGFLGAAIPEE
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
HGGLGLGALDLGVIMEALGAANAAVPFMSSIILGAEAIRLAGSDAQKAAWLPRLASGEAV
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEE
ATFAYAEGPGPVFATGARLEGGKLSGSKFPVADAGIADIAVVLVAGGDLALVELDQPGVT
EEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCEEEEEECCCCCC
RTKLDSFDQLRPHYRLDFDAAMADPMPGRGKLDRLIDQAAVQAAFEAAGAAEACLYMARD
HHHHCCHHHCCCCEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YALERQIFGRSLASFQAIKHKLADVAVATELARSNAYFGGWAAQSSPDDLPAAAAAARLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHC
GIKCFEMAARENLQVHGGIGYTFEANCHFYYRRERMLAVHLGNRGFWANRLLAAQPGRQG
CCHHHHHHHHCCCEEECCCCEEEECCEEEEEEECEEEEEEECCCCCHHCCCEECCCCCCC
QAA
CCC
>Mature Secondary Structure
MNFDLSDEQKMLGEQARALLADLSPFDRLRQLIDSGADWDEPLWRALAEMGFLGAAIPEE
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
HGGLGLGALDLGVIMEALGAANAAVPFMSSIILGAEAIRLAGSDAQKAAWLPRLASGEAV
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEE
ATFAYAEGPGPVFATGARLEGGKLSGSKFPVADAGIADIAVVLVAGGDLALVELDQPGVT
EEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCEEEEEECCCCCC
RTKLDSFDQLRPHYRLDFDAAMADPMPGRGKLDRLIDQAAVQAAFEAAGAAEACLYMARD
HHHHCCHHHCCCCEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YALERQIFGRSLASFQAIKHKLADVAVATELARSNAYFGGWAAQSSPDDLPAAAAAARLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHC
GIKCFEMAARENLQVHGGIGYTFEANCHFYYRRERMLAVHLGNRGFWANRLLAAQPGRQG
CCHHHHHHHHCCCEEECCCCEEEECCEEEEEEECEEEEEEECCCCCHHCCCEECCCCCCC
QAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: crotono-betaine; reduced acceptor; crotonobetainyl-CoA [C]

Specific reaction: reduced acceptor + crotono-betaine = Acceptor + gamma-butyrobetaine reduced acceptor + crotonobetainyl-CoA = Acceptor + gamma-butyrobetainyl-CoA [C]

General reaction: Oxidoreductases; Acting on the CH-CH group of donors; With other acceptors [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]