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The map label for this gene is ptmB [H]

Identifier: 103487063

GI number: 103487063

Start: 1650717

End: 1651409

Strand: Reverse

Name: ptmB [H]

Synonym: Sala_1578

Alternate gene names: 103487063

Gene position: 1651409-1650717 (Counterclockwise)

Preceding gene: 103487064

Following gene: 103487062

Centisome position: 49.37

GC content: 59.45

Gene sequence:

>693_bases
TTGAACACCATCTGTACGATCTGCGCACGCGGAGGATCGCGCGGAGTGCCGGGAAAGAATATCCGCCCGCTGCTCGGCAA
GCCGTTGATCGTCCATACGATCGAAATGGCGCTGGCGCATTCGCGCATCGACCATGTTTTCGTGTCGACCGACAGCGAAG
CGATCGCCGACATTGCGCGCGCGGCGGGGGCAAGCCTTCCCTACCTGCGCCCCGCGGAGCTGGCAACCGATACGGCCGGA
AAGATACCGGTGATCCGGCATCTGGTCGAACATGTCGAGGCTGAAGGCTATGGCGTGGACCGGATCGTCGATCTGGACCC
GACGTCACCACTGCGACTGCCATCCGACATCGATGCCTGCCTCGATCTGGTCGATGCCGGTGCCGAAGCGGTGATTACGG
CTTTTGAGGCGGAAAAAAATCCATATTTCAATATGGTCGAGCTGGACGAAACCGGGATTGCCCGCATTTCGAAGCGGTCG
GAATCGGGGCATGTGGTTGCGCGCCAGGCGGCACCCCCGGTCTATGCGATGAATGCGTCCATCTATGTGTGGAAGCGTCA
TGCGCTGGGCAATGTCCTTTGGGACAGTGAACCGCGCCTGCACGTCATGCCGCGTGAAAGGTCCATCGACATCGATTCCG
AACTGGATTTCAAACTGGTCGAACTGTTGATGCGCGAAAGGCTGGAGCAATGA

Upstream 100 bases:

>100_bases
ATGGGCACGGCACGACGCGGCTGCCGCTGAAAGAGGGGTTGAAGGCCACCCGGCTGGCGATCGCGGCCCATGAATATGTC
GACAAGGGCGGGGACCGGAA

Downstream 100 bases:

>100_bases
GCAAGGATCGTCCGCTTTCAGGAAAGCTGGTGGTGCTCACCGGCGCGGGCGGCATCATCGGACGTGTCGCGACCGGCCTG
TTCGTTCGCAACGGTGCGCG

Product: acylneuraminate cytidylyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNTICTICARGGSRGVPGKNIRPLLGKPLIVHTIEMALAHSRIDHVFVSTDSEAIADIARAAGASLPYLRPAELATDTAG
KIPVIRHLVEHVEAEGYGVDRIVDLDPTSPLRLPSDIDACLDLVDAGAEAVITAFEAEKNPYFNMVELDETGIARISKRS
ESGHVVARQAAPPVYAMNASIYVWKRHALGNVLWDSEPRLHVMPRERSIDIDSELDFKLVELLMRERLEQ

Sequences:

>Translated_230_residues
MNTICTICARGGSRGVPGKNIRPLLGKPLIVHTIEMALAHSRIDHVFVSTDSEAIADIARAAGASLPYLRPAELATDTAG
KIPVIRHLVEHVEAEGYGVDRIVDLDPTSPLRLPSDIDACLDLVDAGAEAVITAFEAEKNPYFNMVELDETGIARISKRS
ESGHVVARQAAPPVYAMNASIYVWKRHALGNVLWDSEPRLHVMPRERSIDIDSELDFKLVELLMRERLEQ
>Mature_230_residues
MNTICTICARGGSRGVPGKNIRPLLGKPLIVHTIEMALAHSRIDHVFVSTDSEAIADIARAAGASLPYLRPAELATDTAG
KIPVIRHLVEHVEAEGYGVDRIVDLDPTSPLRLPSDIDACLDLVDAGAEAVITAFEAEKNPYFNMVELDETGIARISKRS
ESGHVVARQAAPPVYAMNASIYVWKRHALGNVLWDSEPRLHVMPRERSIDIDSELDFKLVELLMRERLEQ

Specific function: Required for biosynthesis of LAH modification in the post-translational modification of Campylobacter coli flagellin [H]

COG id: COG1083

COG function: function code M; CMP-N-acetylneuraminic acid synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CMP-NeuNAc synthase family [H]

Homologues:

Organism=Homo sapiens, GI8923900, Length=219, Percent_Identity=28.7671232876712, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003329 [H]

Pfam domain/function: PF02348 CTP_transf_3 [H]

EC number: NA

Molecular weight: Translated: 25292; Mature: 25292

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTICTICARGGSRGVPGKNIRPLLGKPLIVHTIEMALAHSRIDHVFVSTDSEAIADIAR
CCCEEEEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHH
AAGASLPYLRPAELATDTAGKIPVIRHLVEHVEAEGYGVDRIVDLDPTSPLRLPSDIDAC
HHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHH
LDLVDAGAEAVITAFEAEKNPYFNMVELDETGIARISKRSESGHVVARQAAPPVYAMNAS
HHHHHCCHHHEEEEEECCCCCCEEEEEECCCCHHHHHCCCCCCCEEEECCCCCEEEECCE
IYVWKRHALGNVLWDSEPRLHVMPRERSIDIDSELDFKLVELLMRERLEQ
EEEEECCCCCCCEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTICTICARGGSRGVPGKNIRPLLGKPLIVHTIEMALAHSRIDHVFVSTDSEAIADIAR
CCCEEEEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHH
AAGASLPYLRPAELATDTAGKIPVIRHLVEHVEAEGYGVDRIVDLDPTSPLRLPSDIDAC
HHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHH
LDLVDAGAEAVITAFEAEKNPYFNMVELDETGIARISKRSESGHVVARQAAPPVYAMNAS
HHHHHCCHHHEEEEEECCCCCCEEEEEECCCCHHHHHCCCCCCCEEEECCCCCEEEECCE
IYVWKRHALGNVLWDSEPRLHVMPRERSIDIDSELDFKLVELLMRERLEQ
EEEEECCCCCCCEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8825781 [H]