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The map label for this gene is aidB [C]

Identifier: 103487022

GI number: 103487022

Start: 1604167

End: 1605969

Strand: Reverse

Name: aidB [C]

Synonym: Sala_1537

Alternate gene names: 103487022

Gene position: 1605969-1604167 (Counterclockwise)

Preceding gene: 103487023

Following gene: 103487021

Centisome position: 48.01

GC content: 63.89

Gene sequence:

>1803_bases
ATGCCCGTCTATCGCGCCCCTGTGCAGGACAGCCTGTTCTTGATCAACGAGGTGCTTGGCGTTGAGAACTATGCCAATCT
TCCCGGCTTCGCCAACGCGACCCCCGACATGATCGAGGCGGTGCTGACCGAAGCGGGGAAGTTTTGCGAAGAGGTGCTGT
TCCCGATCAACCAGTCGGGCGACCTTGAAGGCTGCACGCGCCACGACGACGGGTCGGTGACGACGCCCAAGGGGTTCAAG
GAAGCGTATAAGGCCTATTGCGAGGCGGGCTGGACGCTGCTGACGCAGCCGGAAGAGTTCGGTGGACAGGGACTGCCGCA
TGTCGTCGGCTTTCCGGTCGAGGAATATCGCATGGCCGCGAACCAGGCCTTTGCCATGTATCCGGGGCTGACGCAGGCCG
CCGTTGCGGCAATCCTCGTCAAGGGATCGGACGAGCAGAAGGCGCGCTATGTTCCGAAGATGGTGTCGGGCGAATGGGGC
GGTACGATGAACCTGACCGAGCCGCATTGCGGCACCGACCTTGGCCTCATCCGCACCCGCGCGGTGCCCAATGGCGACGG
CAGCTATGCCATCACGGGCACCAAGATCTTCATTTCGTCGGGCGAGCACGACCTGACCGACAACATCATCCACCTCGTCC
TCGCCAAGACTCCCGACGCGCCCGACAGTGTGAAGGGCATCTCGTTGTTCATCGTGCCGAAGTTCCTCGTGAAGGAAGAT
GGCTCGCTCGGCGAGCGCAACGCGCTGCAATGCGGGTCGATCGAGCACAAGATGGGCATCCATGCCAATTCGACCTGCGT
GATGAACTATGACGGCGCCACCGGCTGGATGGTCGGCGAGGAGAATAAGGGGCTCGCCGCGATGTTCGTGATGATGAACG
CCGCGCGGCTGGGTGTCGGGATTCAGGGATTGGGGCAGGCCGACATCGCCTTCCAGAATGCCGTCGCCTATGCGCAGGAC
CGCCGCCAGGGCCGCGCGCTCACCGGACCGAAAGACCCTCAGGAAAAGGCCGACCCGCTGTTCGTCCATCCCGATGTGCG
CCGGATGCTGATGGACGCCAAGGCGACCGTCGAAGGGCTGCGCGCGCTGTGCCTGTGGGGCGCGCTCCAGGTCGATCTGG
CGCATGTGGCCGAGACCGAGGAGGAACGGCAGCTCGCCGACGATCTCGTCAGCCTGCTCACCCCGGTCATCAAGGGCTAT
GGCACCGACAAGGGCTATGAGGTCGCGACCAATGCGCAGCAGGTGTTCGGCGGCCACGGTTACATCGAGGAACATGGCAT
GAGCCAATATGTCCGCGATGCCCGCATCACGATGATTTACGAAGGCGCGAACGGCGTGCAGGCGATGGACCTTGTCGGCC
GCAAGCTCGCGCAGAATGGCGGCCGCGCGATCCAGACCCTCTTCGCCATCGTCGATGCCGAATGCGCCGCGGCGAAGGAC
AAGCCCGCGCTCGCCGATTTCGCGGGGCGCCTCGAAAAAGCCAATGGCGAGCTGAAGGCCGCGACGATGTGGTTCATGGC
TAATGGCATGACCAACCCGAACAATGTCGGCGCCGGCGCGCATCATTATATGCACATCACCGGCATCGTCGCGCTGGGGC
TGATGTGGCTGCGCATGGCCGAGGCGGCGCAGAAGGCGCTCGACGAAGGGCGCGGAGCCAAGGATTTCCTCGATGCAAAG
ATCGTCACCGCGCGCCACTTCGGCGAACGCTTCCTGCCCGACGCGGGATCGCTTCGCCGCAAGATCGAGGCGGGCAGCGA
GACGATGATGGCGCTGACCCCGGAACAGTTTTTCGCGGCCTGA

Upstream 100 bases:

>100_bases
GAAAAAGGTCGACGCCGGCAAGAAATAGCCGGTCCGACCCGAAGCTGGCCTCTCCCCAGGCAAGTTGGACCCGATCAACT
GCTTTTCAGAAGGATTTCCC

Downstream 100 bases:

>100_bases
CGCCGTGTCGGCGCAACCATCGCCGCCGCCGGGCGTGTCGGCGGCGATGGGCAGCGATCTGGAACCGATTGTCGTCGAAG
GCCGCAATTGCTGGCGGATC

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: Butyryl-CoA dehydrogenase; BCAD; SCAD [H]

Number of amino acids: Translated: 600; Mature: 599

Protein sequence:

>600_residues
MPVYRAPVQDSLFLINEVLGVENYANLPGFANATPDMIEAVLTEAGKFCEEVLFPINQSGDLEGCTRHDDGSVTTPKGFK
EAYKAYCEAGWTLLTQPEEFGGQGLPHVVGFPVEEYRMAANQAFAMYPGLTQAAVAAILVKGSDEQKARYVPKMVSGEWG
GTMNLTEPHCGTDLGLIRTRAVPNGDGSYAITGTKIFISSGEHDLTDNIIHLVLAKTPDAPDSVKGISLFIVPKFLVKED
GSLGERNALQCGSIEHKMGIHANSTCVMNYDGATGWMVGEENKGLAAMFVMMNAARLGVGIQGLGQADIAFQNAVAYAQD
RRQGRALTGPKDPQEKADPLFVHPDVRRMLMDAKATVEGLRALCLWGALQVDLAHVAETEEERQLADDLVSLLTPVIKGY
GTDKGYEVATNAQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGVQAMDLVGRKLAQNGGRAIQTLFAIVDAECAAAKD
KPALADFAGRLEKANGELKAATMWFMANGMTNPNNVGAGAHHYMHITGIVALGLMWLRMAEAAQKALDEGRGAKDFLDAK
IVTARHFGERFLPDAGSLRRKIEAGSETMMALTPEQFFAA

Sequences:

>Translated_600_residues
MPVYRAPVQDSLFLINEVLGVENYANLPGFANATPDMIEAVLTEAGKFCEEVLFPINQSGDLEGCTRHDDGSVTTPKGFK
EAYKAYCEAGWTLLTQPEEFGGQGLPHVVGFPVEEYRMAANQAFAMYPGLTQAAVAAILVKGSDEQKARYVPKMVSGEWG
GTMNLTEPHCGTDLGLIRTRAVPNGDGSYAITGTKIFISSGEHDLTDNIIHLVLAKTPDAPDSVKGISLFIVPKFLVKED
GSLGERNALQCGSIEHKMGIHANSTCVMNYDGATGWMVGEENKGLAAMFVMMNAARLGVGIQGLGQADIAFQNAVAYAQD
RRQGRALTGPKDPQEKADPLFVHPDVRRMLMDAKATVEGLRALCLWGALQVDLAHVAETEEERQLADDLVSLLTPVIKGY
GTDKGYEVATNAQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGVQAMDLVGRKLAQNGGRAIQTLFAIVDAECAAAKD
KPALADFAGRLEKANGELKAATMWFMANGMTNPNNVGAGAHHYMHITGIVALGLMWLRMAEAAQKALDEGRGAKDFLDAK
IVTARHFGERFLPDAGSLRRKIEAGSETMMALTPEQFFAA
>Mature_599_residues
PVYRAPVQDSLFLINEVLGVENYANLPGFANATPDMIEAVLTEAGKFCEEVLFPINQSGDLEGCTRHDDGSVTTPKGFKE
AYKAYCEAGWTLLTQPEEFGGQGLPHVVGFPVEEYRMAANQAFAMYPGLTQAAVAAILVKGSDEQKARYVPKMVSGEWGG
TMNLTEPHCGTDLGLIRTRAVPNGDGSYAITGTKIFISSGEHDLTDNIIHLVLAKTPDAPDSVKGISLFIVPKFLVKEDG
SLGERNALQCGSIEHKMGIHANSTCVMNYDGATGWMVGEENKGLAAMFVMMNAARLGVGIQGLGQADIAFQNAVAYAQDR
RQGRALTGPKDPQEKADPLFVHPDVRRMLMDAKATVEGLRALCLWGALQVDLAHVAETEEERQLADDLVSLLTPVIKGYG
TDKGYEVATNAQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGVQAMDLVGRKLAQNGGRAIQTLFAIVDAECAAAKDK
PALADFAGRLEKANGELKAATMWFMANGMTNPNNVGAGAHHYMHITGIVALGLMWLRMAEAAQKALDEGRGAKDFLDAKI
VTARHFGERFLPDAGSLRRKIEAGSETMMALTPEQFFAA

Specific function: Has an optimum specificity for 4-carbon length fatty acyl-CoAs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI21361497, Length=449, Percent_Identity=26.2806236080178, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI4501857, Length=361, Percent_Identity=26.0387811634349, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI4501859, Length=363, Percent_Identity=26.9972451790634, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI76496475, Length=370, Percent_Identity=28.6486486486486, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI4557235, Length=370, Percent_Identity=28.6486486486486, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI4557233, Length=436, Percent_Identity=27.0642201834862, Blast_Score=101, Evalue=3e-21,
Organism=Homo sapiens, GI226958412, Length=415, Percent_Identity=25.0602409638554, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI7656849, Length=364, Percent_Identity=27.4725274725275, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI226958414, Length=382, Percent_Identity=24.869109947644, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI4503943, Length=350, Percent_Identity=26.5714285714286, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI7669494, Length=335, Percent_Identity=26.5671641791045, Blast_Score=78, Evalue=2e-14,
Organism=Escherichia coli, GI87082384, Length=301, Percent_Identity=28.2392026578073, Blast_Score=108, Evalue=9e-25,
Organism=Escherichia coli, GI87081958, Length=399, Percent_Identity=26.0651629072682, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17508101, Length=365, Percent_Identity=26.027397260274, Blast_Score=109, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17534899, Length=436, Percent_Identity=25.9174311926606, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17506239, Length=363, Percent_Identity=26.9972451790634, Blast_Score=99, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI71985184, Length=377, Percent_Identity=27.8514588859416, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17538396, Length=387, Percent_Identity=26.6149870801034, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17569725, Length=381, Percent_Identity=26.246719160105, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=240, Percent_Identity=30.8333333333333, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17533517, Length=423, Percent_Identity=23.8770685579196, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI86563381, Length=303, Percent_Identity=26.4026402640264, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI86563383, Length=303, Percent_Identity=26.4026402640264, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17534353, Length=334, Percent_Identity=26.9461077844311, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=232, Percent_Identity=29.3103448275862, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17570075, Length=380, Percent_Identity=23.4210526315789, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=260, Percent_Identity=29.2307692307692, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17551932, Length=371, Percent_Identity=23.4501347708895, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17505929, Length=371, Percent_Identity=23.989218328841, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21356377, Length=375, Percent_Identity=27.7333333333333, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI21355753, Length=394, Percent_Identity=27.1573604060914, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI281363737, Length=430, Percent_Identity=26.7441860465116, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24666513, Length=409, Percent_Identity=25.9168704156479, Blast_Score=96, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24646207, Length=385, Percent_Identity=25.7142857142857, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI19920834, Length=368, Percent_Identity=28.804347826087, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24660351, Length=326, Percent_Identity=25.4601226993865, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.2 [H]

Molecular weight: Translated: 64682; Mature: 64550

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVYRAPVQDSLFLINEVLGVENYANLPGFANATPDMIEAVLTEAGKFCEEVLFPINQSG
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
DLEGCTRHDDGSVTTPKGFKEAYKAYCEAGWTLLTQPEEFGGQGLPHVVGFPVEEYRMAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCHHHCCCCCCHHHCCCHHHHHHHH
NQAFAMYPGLTQAAVAAILVKGSDEQKARYVPKMVSGEWGGTMNLTEPHCGTDLGLIRTR
HCCEEECCCHHHHHHHHHHEECCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHHEEE
AVPNGDGSYAITGTKIFISSGEHDLTDNIIHLVLAKTPDAPDSVKGISLFIVPKFLVKED
CCCCCCCCEEEEEEEEEEECCCCCHHHHHEEEEEECCCCCCCCCCCEEEEEECHHHHCCC
GSLGERNALQCGSIEHKMGIHANSTCVMNYDGATGWMVGEENKGLAAMFVMMNAARLGVG
CCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHCCC
IQGLGQADIAFQNAVAYAQDRRQGRALTGPKDPQEKADPLFVHPDVRRMLMDAKATVEGL
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEECHHHHHHHHHHHHHHHHH
RALCLWGALQVDLAHVAETEEERQLADDLVSLLTPVIKGYGTDKGYEVATNAQQVFGGHG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHCCCC
YIEEHGMSQYVRDARITMIYEGANGVQAMDLVGRKLAQNGGRAIQTLFAIVDAECAAAKD
CHHHCCHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
KPALADFAGRLEKANGELKAATMWFMANGMTNPNNVGAGAHHYMHITGIVALGLMWLRMA
CCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EAAQKALDEGRGAKDFLDAKIVTARHFGERFLPDAGSLRRKIEAGSETMMALTPEQFFAA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECHHHHHCC
>Mature Secondary Structure 
PVYRAPVQDSLFLINEVLGVENYANLPGFANATPDMIEAVLTEAGKFCEEVLFPINQSG
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
DLEGCTRHDDGSVTTPKGFKEAYKAYCEAGWTLLTQPEEFGGQGLPHVVGFPVEEYRMAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCHHHCCCCCCHHHCCCHHHHHHHH
NQAFAMYPGLTQAAVAAILVKGSDEQKARYVPKMVSGEWGGTMNLTEPHCGTDLGLIRTR
HCCEEECCCHHHHHHHHHHEECCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHHEEE
AVPNGDGSYAITGTKIFISSGEHDLTDNIIHLVLAKTPDAPDSVKGISLFIVPKFLVKED
CCCCCCCCEEEEEEEEEEECCCCCHHHHHEEEEEECCCCCCCCCCCEEEEEECHHHHCCC
GSLGERNALQCGSIEHKMGIHANSTCVMNYDGATGWMVGEENKGLAAMFVMMNAARLGVG
CCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHCCC
IQGLGQADIAFQNAVAYAQDRRQGRALTGPKDPQEKADPLFVHPDVRRMLMDAKATVEGL
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEECHHHHHHHHHHHHHHHHH
RALCLWGALQVDLAHVAETEEERQLADDLVSLLTPVIKGYGTDKGYEVATNAQQVFGGHG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHCCCC
YIEEHGMSQYVRDARITMIYEGANGVQAMDLVGRKLAQNGGRAIQTLFAIVDAECAAAKD
CHHHCCHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
KPALADFAGRLEKANGELKAATMWFMANGMTNPNNVGAGAHHYMHITGIVALGLMWLRMA
CCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EAAQKALDEGRGAKDFLDAKIVTARHFGERFLPDAGSLRRKIEAGSETMMALTPEQFFAA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8399220; 7857927 [H]