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The map label for this gene is cyoD [H]

Identifier: 103486990

GI number: 103486990

Start: 1567926

End: 1568312

Strand: Reverse

Name: cyoD [H]

Synonym: Sala_1505

Alternate gene names: 103486990

Gene position: 1568312-1567926 (Counterclockwise)

Preceding gene: 103486991

Following gene: 103486989

Centisome position: 46.88

GC content: 63.57

Gene sequence:

>387_bases
ATGAGCGCCGACCCCCACGCCGCGCACGGTCATGGCGAGATCGAGATGCCGCACGCGACGATGCGCGACTATGTCATCGG
TTTTGTGCTGTCGGTGATCCTGACCGCCATCCCCTTCTGGCTGGTGATGACAATGCCGCTGAGCGCGGGCACGACCGGCG
CGATCATCATGGCCTTTGCGGTGGTGCAGATCGTCGTCCACATGGTCTTTTTCCTGCATATGACGCCGAAGGCGGAGGGC
GGCTGGTCGCTGACCTCGCTCGTCTTTACCGTCATCGTCGTCGTCATCATGCTCGCGGGGTCGCTGTGGGTGATGCACCA
CCTCAACACCAACATGATGCCGATGCCGCACGAACCGACGAGCCGGCTCGAGAGCCGGGCGCCGTGA

Upstream 100 bases:

>100_bases
CGAACAAGCGCCGGGTGATGTGCCTTAGCATGTTCTGGCACTTCCTCGACGTCGTGTGGATCGGCGTCTTCACCTTTGTC
TATCTGACGGGAGTGCTGCG

Downstream 100 bases:

>100_bases
CGCGCGCCCGCCGCGCGGGTTTTGCCGCGGCGGCGCTGATCGCGGCCGTGCTTCTGGCGGGGCTCGGTGTGTGGCAGGTC
GAGCGGCGCGCGTGGAAGCA

Product: cytochrome C oxidase subunit IV

Products: Ubiquinone-8; H2O [C]

Alternate protein names: Ubiquinol oxidase chain D [H]

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSADPHAAHGHGEIEMPHATMRDYVIGFVLSVILTAIPFWLVMTMPLSAGTTGAIIMAFAVVQIVVHMVFFLHMTPKAEG
GWSLTSLVFTVIVVVIMLAGSLWVMHHLNTNMMPMPHEPTSRLESRAP

Sequences:

>Translated_128_residues
MSADPHAAHGHGEIEMPHATMRDYVIGFVLSVILTAIPFWLVMTMPLSAGTTGAIIMAFAVVQIVVHMVFFLHMTPKAEG
GWSLTSLVFTVIVVVIMLAGSLWVMHHLNTNMMPMPHEPTSRLESRAP
>Mature_127_residues
SADPHAAHGHGEIEMPHATMRDYVIGFVLSVILTAIPFWLVMTMPLSAGTTGAIIMAFAVVQIVVHMVFFLHMTPKAEGG
WSLTSLVFTVIVVVIMLAGSLWVMHHLNTNMMPMPHEPTSRLESRAP

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

Organism=Escherichia coli, GI1786632, Length=97, Percent_Identity=49.4845360824742, Blast_Score=104, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005171
- InterPro:   IPR014210 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: NA

Molecular weight: Translated: 14033; Mature: 13902

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.2 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
9.4 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADPHAAHGHGEIEMPHATMRDYVIGFVLSVILTAIPFWLVMTMPLSAGTTGAIIMAFA
CCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VVQIVVHMVFFLHMTPKAEGGWSLTSLVFTVIVVVIMLAGSLWVMHHLNTNMMPMPHEPT
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
SRLESRAP
HHHHCCCC
>Mature Secondary Structure 
SADPHAAHGHGEIEMPHATMRDYVIGFVLSVILTAIPFWLVMTMPLSAGTTGAIIMAFA
CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VVQIVVHMVFFLHMTPKAEGGWSLTSLVFTVIVVVIMLAGSLWVMHHLNTNMMPMPHEPT
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
SRLESRAP
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ubiquinol-8; O(2) [C]

Specific reaction: Ubiquinol-8 + O(2) = Ubiquinone-8 + H2O [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]