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The map label for this gene is dinG [H]

Identifier: 103486900

GI number: 103486900

Start: 1467222

End: 1469960

Strand: Direct

Name: dinG [H]

Synonym: Sala_1414

Alternate gene names: 103486900

Gene position: 1467222-1469960 (Clockwise)

Preceding gene: 103486899

Following gene: 103486901

Centisome position: 43.86

GC content: 70.79

Gene sequence:

>2739_bases
GTGATTCCCGATCCGCTCTCTTTGCCCGCGATCCATGCGAGCCATGTCGGCATCTGGATCGCCGATGCGAAGGGCCGCGC
GCAGCGGGTCGGGCGCGGCGAAGCGATTGCGGCGGTCGCGGCGACGCCGCACCTGCTGCTGAACGCGACGTTGACCGGCG
ACCGGCTGGGTTATCCCGAACTGTCGGGGCTCGATCTGCTCGAACTCTTCGCCTTTCTCTATCCTGCGCGCTTTACGGTT
CCAACGCCCGCAGGATTCGCCGCCGCGCTGCGTCTGACAGCGCCGGGAAGCGAGGACGAGATTGCGGCTTTCTTGCCGAA
GGCGGCGGCCGCGATGCTCGCCAGCCTCGGCGATCCCGACTGGAGCGAGCGCGAAGGCGCGTGGCACGGCGCGCAGGCGC
TGGCGCGTCAGCGCTGGCCGTGGGCGCCGCTGATCCAGCCGCGGCTCGCAAAGCCTGACGGCAACGAACGCTGGCTGTTT
GCGCGCCTTCCCGAATGGGAGGAAACATCGCCGCGCCCCGCGCCGCGGCAGACGACGATCGACGAGGCCGATGTCACCGC
GCGGCTCGACCGGCTGACCGGCGACGGCGCCGAACGCCGCCCCGGCCAGCGCGACTATGCGCGCGCCGCCGCAGCCGTCT
TTGCCCCGCGCGAACGCCGGGACGCGCCGCAGATGCTCGTTGCCGAAGCAGGCACCGGCATCGGCAAGACGCTGGGCTAT
CTGGCCCCTGCAAAGCAATGGATCGACCAGTCGGCAGGCGCGATCTGCATTTCGACCTATACCAAGGCGCTGCAACGCCA
ATTGGCGCGCGAAACGGAGAAACTCTATCCCGACGCCGCGACGCACCGCGAAAAGGTTGTCGTGCGCAAGGGGCGCGAAA
ATTACCTCTGCCTGCTCAATCTGGAGGATGCGTTGCAGGGGGGCTTTTCGGGGCGCGCGGCGATTCTGGCGCAGCTCGTC
GCGCGCTGGGCTGCCTTTACGCGCGATGGCGACATGATCGGCGGCGACCTGCCCGGCTGGCTCCCGGCGCTGTTCCGGCG
CAACGGCACAACGGCGCTCACCGACCGGCGCGGCGAGTGCATCTATGCGGGCTGCCCCTATTTTCGCAAATGCTTCATCG
AACGATCGGCACGCGCCGCGGCGCAGGCCGACATCGTCATCGCCAACCACGCGCTGACGATGGTGCAGGCGGCGCGGCCG
CGCGAGGGTGCGGGCGCAGCGCCAAGCCGGCTGATCTTCGACGAAGGCCATCACCTGTGGGACGCCGCCGATTCGATGTT
CGCCGCGGCGCTGACGGGACAGGAAGCGGTCGAGATCCGCCGCTGGGTGCTGGGGCCGGAGGGCAAGTCGCGCGGGCGGC
GGCGCGGGCTTGCCGCACGGCTCGCCGATGTCGCAAGCTATGACGAGGCCGGCGACCGCGCGATCCAGGCCGCGATCGCC
GCCGCCGCCGAACTGCCCAGCGACGGCTGGCTTGGCCGGCTCGCAGAGAATGAGCCCTGGGGGGCGGTCGAACGGCTGCT
CGTCGCGGCGCGCGCCATGGTCTATGCGCGCGCGGTCGATACGCGCGCCGCCGACAGCGGCTATGGCCTCGAAACCGAAC
TCGCCGATCCCGACCCCGAGTTGGTCGCCGCCGCCGCGAGCGCGAGCGACGCGATCGAGGCGTTGCTGCGCCCGCTGATG
GCGCTCGGCAAACGGCTTGAAGCGCTGATCGAGGATCCGCCCGACTGGCTCGACGGACAGGCGCGCGCGCGGATCGACGG
GGCGCGGCACAGCCTTGGCACGCGGGTCGACACGCTGGGCGGCTGGCTTTCCCTGCTCGGCCGCGTCGGCGGCCCCGCCG
ACCCCGATTTCGTCGACTGGCTGGCGGTCGACCGCTACGACGGGCGCGAGTTCGACTGCGGGTTGCACCGCCACTGGCTC
GACCCCGCGCGCCCGGTCGCCGACATCGTCTACGCGCAAGCGCACGGTGTGCTCGTTACCTCGGCCACCTTGCGCGGCGG
CGGCCACGGCAGTGGCGGCTGGGCCGAGGCCGATATCCGCACCGGCGCGCGTCATATGGACGGCGGCGTCCGCCATTTCG
CGGTGCCCAGCCCATTCGACTATGCGCGACAGGCCGAGGTGCTGATCGTCACCGACATTGCGCGTGGCGACCTGCCTGCG
CTCGCCGGGGCCTACAGCCGCCTGATCGAAGCGGCGGGTGGCGGTGCGCTGGGGCTGTTCAGCGCGATCCGGCGGCTGCG
CATCGTCCATGCGCGCATCGCCGACCGGCTCGCGCGCGCCGGGCTCCCGCTTTTTGCGCAACATGTCGATCCGCTCGACA
CCGGGACGCTGATCGACATCTTTCGCGCCGATCCACACGCCTCGCTGCTCGGCACCGATGCTCTGCGCGACGGCGTCGAC
GTGCCCGGCGATTCGCTGCGGCTCGTGGTGATGGAGGGGGTGCCCTGGCCGCGCCCGACCATCCTTCACGCGGCGCGGCG
CGCGGCGCAGGGCGGCGGCGCCTATGACGATATGGTGATCCGCGGCCGCATCGCGCAGGCGTTCGGCCGCCTGATCCGCC
GCGCCGACGATTTCGGCCAGTTCGTGATGCTGTCGCCCAGCGTTCCCTCGCGGCTGCTCAGCGCCTTTCCCGACGGAACG
CCGATCCGCCGCCTGCCGCTCGACGAGGCGGTGAGCCATGTCGCCGCCGCCAATGTCGAACGAAGAAAAAGCGCGTTTCG
CGCCTTTTCACCATCATAA

Upstream 100 bases:

>100_bases
AAAGCGTCGACTGGGTGATGGTGCGCGGGCGGATCGCCGACTGAGGCAGGTCGCCGAGCGCCACCTTGCCGCGTTCGCCT
TTTGTCCCTAGCCTAGCGGC

Downstream 100 bases:

>100_bases
GTTTGCGGCACAAGGCGCGCGAACGAGGGGATAGCGCGGCGGCGCGGGGAGATGATTTGAAGACTTTGACCATCCTGCGG
CACGCCAAATCGGGTTGGGA

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 912; Mature: 912

Protein sequence:

>912_residues
MIPDPLSLPAIHASHVGIWIADAKGRAQRVGRGEAIAAVAATPHLLLNATLTGDRLGYPELSGLDLLELFAFLYPARFTV
PTPAGFAAALRLTAPGSEDEIAAFLPKAAAAMLASLGDPDWSEREGAWHGAQALARQRWPWAPLIQPRLAKPDGNERWLF
ARLPEWEETSPRPAPRQTTIDEADVTARLDRLTGDGAERRPGQRDYARAAAAVFAPRERRDAPQMLVAEAGTGIGKTLGY
LAPAKQWIDQSAGAICISTYTKALQRQLARETEKLYPDAATHREKVVVRKGRENYLCLLNLEDALQGGFSGRAAILAQLV
ARWAAFTRDGDMIGGDLPGWLPALFRRNGTTALTDRRGECIYAGCPYFRKCFIERSARAAAQADIVIANHALTMVQAARP
REGAGAAPSRLIFDEGHHLWDAADSMFAAALTGQEAVEIRRWVLGPEGKSRGRRRGLAARLADVASYDEAGDRAIQAAIA
AAAELPSDGWLGRLAENEPWGAVERLLVAARAMVYARAVDTRAADSGYGLETELADPDPELVAAAASASDAIEALLRPLM
ALGKRLEALIEDPPDWLDGQARARIDGARHSLGTRVDTLGGWLSLLGRVGGPADPDFVDWLAVDRYDGREFDCGLHRHWL
DPARPVADIVYAQAHGVLVTSATLRGGGHGSGGWAEADIRTGARHMDGGVRHFAVPSPFDYARQAEVLIVTDIARGDLPA
LAGAYSRLIEAAGGGALGLFSAIRRLRIVHARIADRLARAGLPLFAQHVDPLDTGTLIDIFRADPHASLLGTDALRDGVD
VPGDSLRLVVMEGVPWPRPTILHAARRAAQGGGAYDDMVIRGRIAQAFGRLIRRADDFGQFVMLSPSVPSRLLSAFPDGT
PIRRLPLDEAVSHVAAANVERRKSAFRAFSPS

Sequences:

>Translated_912_residues
MIPDPLSLPAIHASHVGIWIADAKGRAQRVGRGEAIAAVAATPHLLLNATLTGDRLGYPELSGLDLLELFAFLYPARFTV
PTPAGFAAALRLTAPGSEDEIAAFLPKAAAAMLASLGDPDWSEREGAWHGAQALARQRWPWAPLIQPRLAKPDGNERWLF
ARLPEWEETSPRPAPRQTTIDEADVTARLDRLTGDGAERRPGQRDYARAAAAVFAPRERRDAPQMLVAEAGTGIGKTLGY
LAPAKQWIDQSAGAICISTYTKALQRQLARETEKLYPDAATHREKVVVRKGRENYLCLLNLEDALQGGFSGRAAILAQLV
ARWAAFTRDGDMIGGDLPGWLPALFRRNGTTALTDRRGECIYAGCPYFRKCFIERSARAAAQADIVIANHALTMVQAARP
REGAGAAPSRLIFDEGHHLWDAADSMFAAALTGQEAVEIRRWVLGPEGKSRGRRRGLAARLADVASYDEAGDRAIQAAIA
AAAELPSDGWLGRLAENEPWGAVERLLVAARAMVYARAVDTRAADSGYGLETELADPDPELVAAAASASDAIEALLRPLM
ALGKRLEALIEDPPDWLDGQARARIDGARHSLGTRVDTLGGWLSLLGRVGGPADPDFVDWLAVDRYDGREFDCGLHRHWL
DPARPVADIVYAQAHGVLVTSATLRGGGHGSGGWAEADIRTGARHMDGGVRHFAVPSPFDYARQAEVLIVTDIARGDLPA
LAGAYSRLIEAAGGGALGLFSAIRRLRIVHARIADRLARAGLPLFAQHVDPLDTGTLIDIFRADPHASLLGTDALRDGVD
VPGDSLRLVVMEGVPWPRPTILHAARRAAQGGGAYDDMVIRGRIAQAFGRLIRRADDFGQFVMLSPSVPSRLLSAFPDGT
PIRRLPLDEAVSHVAAANVERRKSAFRAFSPS
>Mature_912_residues
MIPDPLSLPAIHASHVGIWIADAKGRAQRVGRGEAIAAVAATPHLLLNATLTGDRLGYPELSGLDLLELFAFLYPARFTV
PTPAGFAAALRLTAPGSEDEIAAFLPKAAAAMLASLGDPDWSEREGAWHGAQALARQRWPWAPLIQPRLAKPDGNERWLF
ARLPEWEETSPRPAPRQTTIDEADVTARLDRLTGDGAERRPGQRDYARAAAAVFAPRERRDAPQMLVAEAGTGIGKTLGY
LAPAKQWIDQSAGAICISTYTKALQRQLARETEKLYPDAATHREKVVVRKGRENYLCLLNLEDALQGGFSGRAAILAQLV
ARWAAFTRDGDMIGGDLPGWLPALFRRNGTTALTDRRGECIYAGCPYFRKCFIERSARAAAQADIVIANHALTMVQAARP
REGAGAAPSRLIFDEGHHLWDAADSMFAAALTGQEAVEIRRWVLGPEGKSRGRRRGLAARLADVASYDEAGDRAIQAAIA
AAAELPSDGWLGRLAENEPWGAVERLLVAARAMVYARAVDTRAADSGYGLETELADPDPELVAAAASASDAIEALLRPLM
ALGKRLEALIEDPPDWLDGQARARIDGARHSLGTRVDTLGGWLSLLGRVGGPADPDFVDWLAVDRYDGREFDCGLHRHWL
DPARPVADIVYAQAHGVLVTSATLRGGGHGSGGWAEADIRTGARHMDGGVRHFAVPSPFDYARQAEVLIVTDIARGDLPA
LAGAYSRLIEAAGGGALGLFSAIRRLRIVHARIADRLARAGLPLFAQHVDPLDTGTLIDIFRADPHASLLGTDALRDGVD
VPGDSLRLVVMEGVPWPRPTILHAARRAAQGGGAYDDMVIRGRIAQAFGRLIRRADDFGQFVMLSPSVPSRLLSAFPDGT
PIRRLPLDEAVSHVAAANVERRKSAFRAFSPS

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=285, Percent_Identity=30.1754385964912, Blast_Score=113, Evalue=6e-26,
Organism=Escherichia coli, GI1787018, Length=242, Percent_Identity=30.1652892561983, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR006054
- InterPro:   IPR006310
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 98134; Mature: 98134

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPDPLSLPAIHASHVGIWIADAKGRAQRVGRGEAIAAVAATPHLLLNATLTGDRLGYPE
CCCCCCCCCCEECCCCEEEEECCCCHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCCC
LSGLDLLELFAFLYPARFTVPTPAGFAAALRLTAPGSEDEIAAFLPKAAAAMLASLGDPD
CCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC
WSEREGAWHGAQALARQRWPWAPLIQPRLAKPDGNERWLFARLPEWEETSPRPAPRQTTI
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
DEADVTARLDRLTGDGAERRPGQRDYARAAAAVFAPRERRDAPQMLVAEAGTGIGKTLGY
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHCCCCHHHHHHH
LAPAKQWIDQSAGAICISTYTKALQRQLARETEKLYPDAATHREKVVVRKGRENYLCLLN
HHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCEEEEEE
LEDALQGGFSGRAAILAQLVARWAAFTRDGDMIGGDLPGWLPALFRRNGTTALTDRRGEC
CHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCE
IYAGCPYFRKCFIERSARAAAQADIVIANHALTMVQAARPREGAGAAPSRLIFDEGHHLW
EEECCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCCCCCCCCCCCCEEECCCCHHH
DAADSMFAAALTGQEAVEIRRWVLGPEGKSRGRRRGLAARLADVASYDEAGDRAIQAAIA
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAELPSDGWLGRLAENEPWGAVERLLVAARAMVYARAVDTRAADSGYGLETELADPDPE
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
LVAAAASASDAIEALLRPLMALGKRLEALIEDPPDWLDGQARARIDGARHSLGTRVDTLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHCCHHHHHH
GWLSLLGRVGGPADPDFVDWLAVDRYDGREFDCGLHRHWLDPARPVADIVYAQAHGVLVT
HHHHHHHHCCCCCCCCHHHHHEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCEEEE
SATLRGGGHGSGGWAEADIRTGARHMDGGVRHFAVPSPFDYARQAEVLIVTDIARGDLPA
EEEECCCCCCCCCCCCHHHHCCCHHHCCCCEEECCCCCCCHHCCCCEEEEEECCCCCCHH
LAGAYSRLIEAAGGGALGLFSAIRRLRIVHARIADRLARAGLPLFAQHVDPLDTGTLIDI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEE
FRADPHASLLGTDALRDGVDVPGDSLRLVVMEGVPWPRPTILHAARRAAQGGGAYDDMVI
EECCCCHHHHCCHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHH
RGRIAQAFGRLIRRADDFGQFVMLSPSVPSRLLSAFPDGTPIRRLPLDEAVSHVAAANVE
HHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
RRKSAFRAFSPS
HHHHHHHCCCCC
>Mature Secondary Structure
MIPDPLSLPAIHASHVGIWIADAKGRAQRVGRGEAIAAVAATPHLLLNATLTGDRLGYPE
CCCCCCCCCCEECCCCEEEEECCCCHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCCC
LSGLDLLELFAFLYPARFTVPTPAGFAAALRLTAPGSEDEIAAFLPKAAAAMLASLGDPD
CCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC
WSEREGAWHGAQALARQRWPWAPLIQPRLAKPDGNERWLFARLPEWEETSPRPAPRQTTI
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
DEADVTARLDRLTGDGAERRPGQRDYARAAAAVFAPRERRDAPQMLVAEAGTGIGKTLGY
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHCCCCHHHHHHH
LAPAKQWIDQSAGAICISTYTKALQRQLARETEKLYPDAATHREKVVVRKGRENYLCLLN
HHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCEEEEEE
LEDALQGGFSGRAAILAQLVARWAAFTRDGDMIGGDLPGWLPALFRRNGTTALTDRRGEC
CHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCE
IYAGCPYFRKCFIERSARAAAQADIVIANHALTMVQAARPREGAGAAPSRLIFDEGHHLW
EEECCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCCCCCCCCCCCCEEECCCCHHH
DAADSMFAAALTGQEAVEIRRWVLGPEGKSRGRRRGLAARLADVASYDEAGDRAIQAAIA
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAELPSDGWLGRLAENEPWGAVERLLVAARAMVYARAVDTRAADSGYGLETELADPDPE
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
LVAAAASASDAIEALLRPLMALGKRLEALIEDPPDWLDGQARARIDGARHSLGTRVDTLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHCCHHHHHH
GWLSLLGRVGGPADPDFVDWLAVDRYDGREFDCGLHRHWLDPARPVADIVYAQAHGVLVT
HHHHHHHHCCCCCCCCHHHHHEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCEEEE
SATLRGGGHGSGGWAEADIRTGARHMDGGVRHFAVPSPFDYARQAEVLIVTDIARGDLPA
EEEECCCCCCCCCCCCHHHHCCCHHHCCCCEEECCCCCCCHHCCCCEEEEEECCCCCCHH
LAGAYSRLIEAAGGGALGLFSAIRRLRIVHARIADRLARAGLPLFAQHVDPLDTGTLIDI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEE
FRADPHASLLGTDALRDGVDVPGDSLRLVVMEGVPWPRPTILHAARRAAQGGGAYDDMVI
EECCCCHHHHCCHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHH
RGRIAQAFGRLIRRADDFGQFVMLSPSVPSRLLSAFPDGTPIRRLPLDEAVSHVAAANVE
HHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
RRKSAFRAFSPS
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]