Click here to switch to the map view.

The map label for this gene is yccW [C]

Identifier: 103486883

GI number: 103486883

Start: 1452212

End: 1452970

Strand: Reverse

Name: yccW [C]

Synonym: Sala_1397

Alternate gene names: 103486883

Gene position: 1452970-1452212 (Counterclockwise)

Preceding gene: 103486884

Following gene: 103486882

Centisome position: 43.43

GC content: 70.09

Gene sequence:

>759_bases
ATGTGGGCACCGGCATTGCCGGAAAGCGAATGGGCGGCGGCCGATGGTGAGTTTGTGCCCGCATCGGACGAGGACGGCGG
CGGCCGCTGGTATTTTCACAAACCCGTGCCCGCCGAGGGCTGGCCGCTGGCGTGGCGTGAGGCGCGCTTCACCGCGTCCT
GCACGCCATTCCGCCATCTGGGTTTCTTTCCCGACATGGCGCCCGTGTGGGACTGGCTGCGCGAACGCATCGCGGACAGG
CCCGACCCCGCCTTCCTCAACCTTTTCGGCTACACCGGCGTCGGCAGTCAGGCGCTCGCCGCGGCGGGGGCATCGGTCAC
CCATGTCGATGCGTCGAAAAAGTCGGTGGCGCAGGCGCGCGACAATGCGGCGCTTGCCGGCATGGCCGACAAGCCGGTGC
GCTGGCTCGTCGACGATGCGGGCAAGTTCACCGCGCGCGAGGTGCGGCGCGGGCGGCGCTACGATGCGATCCTGCTCGAT
CCCCCCAAGTTCGGGCGCGGCCCGAACAATGAACGCTGGCAGATCGAGGAAGGGCTGGCGCCGCTGCTCGCCGATTGCCG
CCAGTTGCTCGATGCCGACAGCCGCGCGCTGTTCCTCACCGTCTATGCCGTGCGCATGTCGGCGCTCGCGATCGGGGAGC
TGCTTGCCCAGCTGTTCGCCGACCTGCCGGGCCGGGTCGAATGCGGCGAGCTGGCGGTGCGCGAGGAAGCGCGCGGGCTG
CTGCTGCCGACCGCGATCTTCGCGCGCTGGAGCCGCTGA

Upstream 100 bases:

>100_bases
CGGCGCGGCGTGGGACGACTATGGGCTGGTCGACAGCGGGGGCGGCCGCAAGCTCGAACGCTATGGCCGCTACCGCTTCA
TCCGCCCGGAGCCGCAGGCG

Downstream 100 bases:

>100_bases
CCGACGCGACTTTCGCACCGTCCGCCATTTTTCTAATGAAAGGGGCAACTCCGGCGCACCTCCCCCGTTGCTTGGAAAGA
GGGCGGCGCGGCCGGATCCT

Product: SAM-dependent methyltransferase

Products: S-adenosyl-L-homocysteine; ubiquinone-9

Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Oxidoreductase; SAM-Dependent Methyltransferase-Like Protein; N6-Adenine-Specific DNA Methylase; Pseudouridine Synthase; LOW QUALITY PROTEIN SAM Dependent Methyltransferase; TRNA/RRNA Methyltransferase; SAM-Dependant Methyltransferase; SAM-Dependent Methyltransferase Protein; Sam Dependent Methyltransferase

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MWAPALPESEWAAADGEFVPASDEDGGGRWYFHKPVPAEGWPLAWREARFTASCTPFRHLGFFPDMAPVWDWLRERIADR
PDPAFLNLFGYTGVGSQALAAAGASVTHVDASKKSVAQARDNAALAGMADKPVRWLVDDAGKFTAREVRRGRRYDAILLD
PPKFGRGPNNERWQIEEGLAPLLADCRQLLDADSRALFLTVYAVRMSALAIGELLAQLFADLPGRVECGELAVREEARGL
LLPTAIFARWSR

Sequences:

>Translated_252_residues
MWAPALPESEWAAADGEFVPASDEDGGGRWYFHKPVPAEGWPLAWREARFTASCTPFRHLGFFPDMAPVWDWLRERIADR
PDPAFLNLFGYTGVGSQALAAAGASVTHVDASKKSVAQARDNAALAGMADKPVRWLVDDAGKFTAREVRRGRRYDAILLD
PPKFGRGPNNERWQIEEGLAPLLADCRQLLDADSRALFLTVYAVRMSALAIGELLAQLFADLPGRVECGELAVREEARGL
LLPTAIFARWSR
>Mature_252_residues
MWAPALPESEWAAADGEFVPASDEDGGGRWYFHKPVPAEGWPLAWREARFTASCTPFRHLGFFPDMAPVWDWLRERIADR
PDPAFLNLFGYTGVGSQALAAAGASVTHVDASKKSVAQARDNAALAGMADKPVRWLVDDAGKFTAREVRRGRRYDAILLD
PPKFGRGPNNERWQIEEGLAPLLADCRQLLDADSRALFLTVYAVRMSALAIGELLAQLFADLPGRVECGELAVREEARGL
LLPTAIFARWSR

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.64

Molecular weight: Translated: 27835; Mature: 27835

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWAPALPESEWAAADGEFVPASDEDGGGRWYFHKPVPAEGWPLAWREARFTASCTPFRHL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCHHHC
GFFPDMAPVWDWLRERIADRPDPAFLNLFGYTGVGSQALAAAGASVTHVDASKKSVAQAR
CCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHCCCCEEECCCHHHHHHHHH
DNAALAGMADKPVRWLVDDAGKFTAREVRRGRRYDAILLDPPKFGRGPNNERWQIEEGLA
CCCEECCCCCCCHHEEHHCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEHHHCHH
PLLADCRQLLDADSRALFLTVYAVRMSALAIGELLAQLFADLPGRVECGELAVREEARGL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCE
LLPTAIFARWSR
ECHHHHHHHCCC
>Mature Secondary Structure
MWAPALPESEWAAADGEFVPASDEDGGGRWYFHKPVPAEGWPLAWREARFTASCTPFRHL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCHHHC
GFFPDMAPVWDWLRERIADRPDPAFLNLFGYTGVGSQALAAAGASVTHVDASKKSVAQAR
CCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHCCCCEEECCCHHHHHHHHH
DNAALAGMADKPVRWLVDDAGKFTAREVRRGRRYDAILLDPPKFGRGPNNERWQIEEGLA
CCCEECCCCCCCHHEEHHCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEHHHCHH
PLLADCRQLLDADSRALFLTVYAVRMSALAIGELLAQLFADLPGRVECGELAVREEARGL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCE
LLPTAIFARWSR
ECHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-adenosyl-L-methionine; 3-demethylubiquinone-9

Specific reaction: S-adenosyl-L-methionine + 3-demethylubiquinone-9 = S-adenosyl-L-homocysteine + ubiquinone-9

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA