The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is hslO [H]

Identifier: 103486843

GI number: 103486843

Start: 1414316

End: 1415161

Strand: Reverse

Name: hslO [H]

Synonym: Sala_1357

Alternate gene names: 103486843

Gene position: 1415161-1414316 (Counterclockwise)

Preceding gene: 103486844

Following gene: 103486842

Centisome position: 42.3

GC content: 65.13

Gene sequence:

>846_bases
GTGCGGCTGGGGCCGGTGCTCAACAGGATCATTGCGGCGCACAGCTATCCGCCGGTTGCCGAAAAGCTGCTGGCCGAGGC
GCTGGTGCTGACGGTTCTGCTCGGTTCGACGCTTAAGACCGAGGGCAGCCAGCTCACCTTGCAAGCGCAGACCGGTGGTG
GGCCGGTCGAATTGCTCGTCTGCGACTACAAGGCGGGCGAACTGCGCGGCTATCTGAAGTTCGATGCCGAACGGCTCGCC
GAAGCCGGTTCGGATCCGACCCTGTTCGCGCTGTTCGGCGAAGGCTTCCTCGCGATCACCTTTGACCAGGCGGCGACGGG
CGAGCGTTATCAGGGCATCGTTCCGCTCGAAGGATCGTCGATCGGCCACGCCGCCGAACATTATTTCGAACAGTCCGAAC
AAATCCCCAGCCTGATCAGTCTCGCCGCGCGTCACGATGCCGGGGCGGACTGTGTCGCGGGCGGACTGCTGCTCCAGCAT
CTGCCCGAAGGCGAGGTGGGACGCGACCGGCTGCACGTAAGGCACGACCATCCCGAGTGGGATCATGCCAAAACGATCGC
GGCGACGCTCAAGGACGAGGAACTCACCGATCCCGCCACGTCGCTCGAAACGCTGGCGTGGCGGCTGTTTCACGAAGACG
AGGTGCGCGTCGAACCCGGCACCGCCGTGTCGCGCGGCTGCCGGTGCAGCACCGACTATTTTGCGGGGGTGCTGGCGCAG
TTCCCGCTGGCCGAGCGCGCGGCGATGGCCGACGACAAAGGCGAGATTGTCGTCGATTGCGCCTTCTGCTCGCGCTTTTT
CCCCATTTCGCTCACCGACATCGCCGGCCACGATCACGCCGAATAG

Upstream 100 bases:

>100_bases
GCAAAGCTTTGAGACGGCAAGCGTGAGCGAAACGATCGAAACCTGGTTCGACCAGCCGCTGGTCTTCACCATCGCTGCGC
GCCATGTGCGCGGGCGACTC

Downstream 100 bases:

>100_bases
GGATTTTTCCCTGCTTTGCGCGTCGAAGCGAGCGCATTCGGCGTCAAGCGGTTGAAATGGAGGGGGCGCCTTGCTAGCTT
GGGGAAGAGCAGGGTCGCAA

Product: Hsp33 protein

Products: NA

Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MRLGPVLNRIIAAHSYPPVAEKLLAEALVLTVLLGSTLKTEGSQLTLQAQTGGGPVELLVCDYKAGELRGYLKFDAERLA
EAGSDPTLFALFGEGFLAITFDQAATGERYQGIVPLEGSSIGHAAEHYFEQSEQIPSLISLAARHDAGADCVAGGLLLQH
LPEGEVGRDRLHVRHDHPEWDHAKTIAATLKDEELTDPATSLETLAWRLFHEDEVRVEPGTAVSRGCRCSTDYFAGVLAQ
FPLAERAAMADDKGEIVVDCAFCSRFFPISLTDIAGHDHAE

Sequences:

>Translated_281_residues
MRLGPVLNRIIAAHSYPPVAEKLLAEALVLTVLLGSTLKTEGSQLTLQAQTGGGPVELLVCDYKAGELRGYLKFDAERLA
EAGSDPTLFALFGEGFLAITFDQAATGERYQGIVPLEGSSIGHAAEHYFEQSEQIPSLISLAARHDAGADCVAGGLLLQH
LPEGEVGRDRLHVRHDHPEWDHAKTIAATLKDEELTDPATSLETLAWRLFHEDEVRVEPGTAVSRGCRCSTDYFAGVLAQ
FPLAERAAMADDKGEIVVDCAFCSRFFPISLTDIAGHDHAE
>Mature_281_residues
MRLGPVLNRIIAAHSYPPVAEKLLAEALVLTVLLGSTLKTEGSQLTLQAQTGGGPVELLVCDYKAGELRGYLKFDAERLA
EAGSDPTLFALFGEGFLAITFDQAATGERYQGIVPLEGSSIGHAAEHYFEQSEQIPSLISLAARHDAGADCVAGGLLLQH
LPEGEVGRDRLHVRHDHPEWDHAKTIAATLKDEELTDPATSLETLAWRLFHEDEVRVEPGTAVSRGCRCSTDYFAGVLAQ
FPLAERAAMADDKGEIVVDCAFCSRFFPISLTDIAGHDHAE

Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]

COG id: COG1281

COG function: function code O; Disulfide bond chaperones of the HSP33 family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HSP33 family [H]

Homologues:

Organism=Escherichia coli, GI87082260, Length=271, Percent_Identity=35.4243542435424, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000397
- InterPro:   IPR016154
- InterPro:   IPR016153 [H]

Pfam domain/function: PF01430 HSP33 [H]

EC number: NA

Molecular weight: Translated: 30345; Mature: 30345

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGPVLNRIIAAHSYPPVAEKLLAEALVLTVLLGSTLKTEGSQLTLQAQTGGGPVELLV
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEEECCCCEEEEEE
CDYKAGELRGYLKFDAERLAEAGSDPTLFALFGEGFLAITFDQAATGERYQGIVPLEGSS
EECCCCHHHHHEEECHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCHHCCEEECCCCC
IGHAAEHYFEQSEQIPSLISLAARHDAGADCVAGGLLLQHLPEGEVGRDRLHVRHDHPEW
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC
DHAKTIAATLKDEELTDPATSLETLAWRLFHEDEVRVEPGTAVSRGCRCSTDYFAGVLAQ
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHCCCCCCHHHHHHHHHH
FPLAERAAMADDKGEIVVDCAFCSRFFPISLTDIAGHDHAE
CCHHHHHHCCCCCCCEEEEEHHHHCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MRLGPVLNRIIAAHSYPPVAEKLLAEALVLTVLLGSTLKTEGSQLTLQAQTGGGPVELLV
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEEECCCCEEEEEE
CDYKAGELRGYLKFDAERLAEAGSDPTLFALFGEGFLAITFDQAATGERYQGIVPLEGSS
EECCCCHHHHHEEECHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCHHCCEEECCCCC
IGHAAEHYFEQSEQIPSLISLAARHDAGADCVAGGLLLQHLPEGEVGRDRLHVRHDHPEW
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC
DHAKTIAATLKDEELTDPATSLETLAWRLFHEDEVRVEPGTAVSRGCRCSTDYFAGVLAQ
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHCCCCCCHHHHHHHHHH
FPLAERAAMADDKGEIVVDCAFCSRFFPISLTDIAGHDHAE
CCHHHHHHCCCCCCCEEEEEHHHHCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA