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The map label for this gene is ybfF [C]

Identifier: 103486823

GI number: 103486823

Start: 1399441

End: 1400310

Strand: Direct

Name: ybfF [C]

Synonym: Sala_1337

Alternate gene names: 103486823

Gene position: 1399441-1400310 (Clockwise)

Preceding gene: 103486821

Following gene: 103486824

Centisome position: 41.83

GC content: 62.76

Gene sequence:

>870_bases
ATGGCAAGTGCCGGCCCCACCTCGAACAGCTTTATCTCGCAGCGGCTCAAGCTCCATTTCGTCGATTGGGGCAATCGCGC
GGCGCCGCCGTTGCTGCTCGTCCACGGCGGGCGCGATCATTGCCGCAACTGGGACTGGGTCGCCGAGCGGCTTCAGGACC
GTTTCCACGTCATCGCCCCCGACCTTCGTGGTCATGGCGACAGCGCCTGGTCGCCCGACGGCAACTATCCGATCGACGGC
TTTGTCTATGATCTGGCCCAACTCATCCACCAGCTCGATCGCGGTCCGGTGTCGATTGTTGCGCATTCGCTGGGCGGCAA
TATCGCGCTCCGCTACTCCGGGCTCTATCCCGCCAATGTGCAGAAGCTGGTCGCGATCGAGGGGCTCGGCCCCTCGCCCA
CGCTGCTCGCCGAACGGGCAAAGACGCCTTATGCTGAGCGTTTCCGCAAATGGATCGACGACAAACGCCAGGCCGCAGGC
CGCTCGCCGCGCCGCTATGCGACGATCGAGGATGCACTGGGAAGGATGATGGCTGAAAATGCCTATCTGACCGAAGCGCA
GGCTCGCCACCTCACCATCCACGGCGTCAGCCGCAACGAGGATGGCACGTGGAGCTGGAAGTTCGACAATTACCTCAATG
TCTGGCCGGCTTTCGACGCGCCGCCGGATGACATCGCCTCGCTGTGGGGCGCGATCACCTGTCCTACGCTCCTGCTCTAT
GGCGCCGACAGCTGGGCCTCGAATCCCGAAAGGGACGGGCGCCTTCGCCATTTCAAAACCGCCAGGGTGATCGAGTTCGA
AAATGCCGGCCACTGGTTGCATCACGACCAGTTCGACCGGTTCATGTCCACGTTAGACGACTTCCTCTAA

Upstream 100 bases:

>100_bases
CTCTCCCTCACTTCTTCTTGATCGCGCGAAGGCGATCCGGGGGTTGACGGATCGAAACCAGTCGCCTTTTGAAACTGGAA
CAGACAGCAAGGATGATCCG

Downstream 100 bases:

>100_bases
GCCGGGCGCTGGCGGCGCGCGTCGGGCGCGCGACACGAGGCGGCACGATGGCATATTCAGGGCAGGTTTCCCGGCCGCAA
AAGTTTCTGTCGGGCGGTGC

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MASAGPTSNSFISQRLKLHFVDWGNRAAPPLLLVHGGRDHCRNWDWVAERLQDRFHVIAPDLRGHGDSAWSPDGNYPIDG
FVYDLAQLIHQLDRGPVSIVAHSLGGNIALRYSGLYPANVQKLVAIEGLGPSPTLLAERAKTPYAERFRKWIDDKRQAAG
RSPRRYATIEDALGRMMAENAYLTEAQARHLTIHGVSRNEDGTWSWKFDNYLNVWPAFDAPPDDIASLWGAITCPTLLLY
GADSWASNPERDGRLRHFKTARVIEFENAGHWLHHDQFDRFMSTLDDFL

Sequences:

>Translated_289_residues
MASAGPTSNSFISQRLKLHFVDWGNRAAPPLLLVHGGRDHCRNWDWVAERLQDRFHVIAPDLRGHGDSAWSPDGNYPIDG
FVYDLAQLIHQLDRGPVSIVAHSLGGNIALRYSGLYPANVQKLVAIEGLGPSPTLLAERAKTPYAERFRKWIDDKRQAAG
RSPRRYATIEDALGRMMAENAYLTEAQARHLTIHGVSRNEDGTWSWKFDNYLNVWPAFDAPPDDIASLWGAITCPTLLLY
GADSWASNPERDGRLRHFKTARVIEFENAGHWLHHDQFDRFMSTLDDFL
>Mature_288_residues
ASAGPTSNSFISQRLKLHFVDWGNRAAPPLLLVHGGRDHCRNWDWVAERLQDRFHVIAPDLRGHGDSAWSPDGNYPIDGF
VYDLAQLIHQLDRGPVSIVAHSLGGNIALRYSGLYPANVQKLVAIEGLGPSPTLLAERAKTPYAERFRKWIDDKRQAAGR
SPRRYATIEDALGRMMAENAYLTEAQARHLTIHGVSRNEDGTWSWKFDNYLNVWPAFDAPPDDIASLWGAITCPTLLLYG
ADSWASNPERDGRLRHFKTARVIEFENAGHWLHHDQFDRFMSTLDDFL

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI23200012, Length=269, Percent_Identity=27.5092936802974, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI23200008, Length=269, Percent_Identity=27.5092936802974, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI218777837, Length=293, Percent_Identity=23.2081911262799, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI218777840, Length=238, Percent_Identity=26.4705882352941, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI13376164, Length=238, Percent_Identity=26.4705882352941, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI18777795, Length=183, Percent_Identity=26.775956284153, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17554012, Length=291, Percent_Identity=23.7113402061856, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21356953, Length=174, Percent_Identity=27.0114942528736, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24655874, Length=228, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24655886, Length=183, Percent_Identity=26.775956284153, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17137390, Length=113, Percent_Identity=31.858407079646, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 32682; Mature: 32551

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAGPTSNSFISQRLKLHFVDWGNRAAPPLLLVHGGRDHCRNWDWVAERLQDRFHVIAP
CCCCCCCCHHHHHHHHEEEEEECCCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHEEECC
DLRGHGDSAWSPDGNYPIDGFVYDLAQLIHQLDRGPVSIVAHSLGGNIALRYSGLYPANV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCC
QKLVAIEGLGPSPTLLAERAKTPYAERFRKWIDDKRQAAGRSPRRYATIEDALGRMMAEN
EEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCC
AYLTEAQARHLTIHGVSRNEDGTWSWKFDNYLNVWPAFDAPPDDIASLWGAITCPTLLLY
CHHCCCCCCEEEEEECCCCCCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHEEE
GADSWASNPERDGRLRHFKTARVIEFENAGHWLHHDQFDRFMSTLDDFL
CCCHHCCCCCCCCCHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASAGPTSNSFISQRLKLHFVDWGNRAAPPLLLVHGGRDHCRNWDWVAERLQDRFHVIAP
CCCCCCCHHHHHHHHEEEEEECCCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHEEECC
DLRGHGDSAWSPDGNYPIDGFVYDLAQLIHQLDRGPVSIVAHSLGGNIALRYSGLYPANV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCC
QKLVAIEGLGPSPTLLAERAKTPYAERFRKWIDDKRQAAGRSPRRYATIEDALGRMMAEN
EEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCC
AYLTEAQARHLTIHGVSRNEDGTWSWKFDNYLNVWPAFDAPPDDIASLWGAITCPTLLLY
CHHCCCCCCEEEEEECCCCCCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHEEE
GADSWASNPERDGRLRHFKTARVIEFENAGHWLHHDQFDRFMSTLDDFL
CCCHHCCCCCCCCCHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]