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The map label for this gene is tctD [H]

Identifier: 103486821

GI number: 103486821

Start: 1397974

End: 1398351

Strand: Direct

Name: tctD [H]

Synonym: Sala_1335

Alternate gene names: 103486821

Gene position: 1397974-1398351 (Clockwise)

Preceding gene: 103486819

Following gene: 103486823

Centisome position: 41.79

GC content: 61.11

Gene sequence:

>378_bases
ATGATTCGCATCTTGCTGGCCGAAGACGACGATGTGATGCGCGAATATCTTGCGCGCGCGCTCACCAGCGCGGGTTATCA
CGTCACCGCAGTCGATCGCGGCACGGCGGCAGTGCCCTATATCGATTCGGGCACCTTCGACCTGCTGCTGTCCGACATCG
TCATGCCCGAAATGGACGGCATCGAACTTGCCCAGCATACGGCAAAGGCGGCCCCGCAGACGCAGGTGATGTTCATCACC
GGTTTCGCCGCGGTTTCGCTGCGTGCCGAGGAAAATGTGCCGCAGGCCAAGCTCCTGTCCAAACCCTTCCATCTCAAGGA
TCTGGTGCGCGAGGTCGATAGCCTGTTCGGGCGCGCCGACCAGTCGCACCAGCAATAA

Upstream 100 bases:

>100_bases
CCACGCCAATTTGTTAAATCTCTCTCGCTATGGCGATGGTGAAGCAAGCGTCGCCGAGCGGAACCGGCGACGTTCCAAGG
ACCAGGGAACAGATTTCACG

Downstream 100 bases:

>100_bases
ACGCAACGATCCACCGAAGGGCTTGCCAAGCCGCTCCAAGGCCTTTAGGGGGCGCGTCACCCCAAAGGGATGGGCGTGTA
GCTCAGTGGTAGAGCACTGT

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MIRILLAEDDDVMREYLARALTSAGYHVTAVDRGTAAVPYIDSGTFDLLLSDIVMPEMDGIELAQHTAKAAPQTQVMFIT
GFAAVSLRAEENVPQAKLLSKPFHLKDLVREVDSLFGRADQSHQQ

Sequences:

>Translated_125_residues
MIRILLAEDDDVMREYLARALTSAGYHVTAVDRGTAAVPYIDSGTFDLLLSDIVMPEMDGIELAQHTAKAAPQTQVMFIT
GFAAVSLRAEENVPQAKLLSKPFHLKDLVREVDSLFGRADQSHQQ
>Mature_125_residues
MIRILLAEDDDVMREYLARALTSAGYHVTAVDRGTAAVPYIDSGTFDLLLSDIVMPEMDGIELAQHTAKAAPQTQVMFIT
GFAAVSLRAEENVPQAKLLSKPFHLKDLVREVDSLFGRADQSHQQ

Specific function: Transcriptional activator of the tctI tricarboxylate transport system operon [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 13772; Mature: 13772

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRILLAEDDDVMREYLARALTSAGYHVTAVDRGTAAVPYIDSGTFDLLLSDIVMPEMDG
CEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCEECCEECCCHHHHHHHHHHCCCCCC
IELAQHTAKAAPQTQVMFITGFAAVSLRAEENVPQAKLLSKPFHLKDLVREVDSLFGRAD
HHHHHHHHHCCCCCEEEEEECEEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCC
QSHQQ
CCCCC
>Mature Secondary Structure
MIRILLAEDDDVMREYLARALTSAGYHVTAVDRGTAAVPYIDSGTFDLLLSDIVMPEMDG
CEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCEECCEECCCHHHHHHHHHHCCCCCC
IELAQHTAKAAPQTQVMFITGFAAVSLRAEENVPQAKLLSKPFHLKDLVREVDSLFGRAD
HHHHHHHHHCCCCCEEEEEECEEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCC
QSHQQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2666399; 11083839; 11677609 [H]