Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486813

Identifier: 103486813

GI number: 103486813

Start: 1384969

End: 1386033

Strand: Direct

Name: 103486813

Synonym: Sala_1327

Alternate gene names: NA

Gene position: 1384969-1386033 (Clockwise)

Preceding gene: 103486812

Following gene: 103486814

Centisome position: 41.4

GC content: 64.41

Gene sequence:

>1065_bases
ATGACCAGCAAGCTGAACACCGTGGGTTTCATCGGTCTGGCGGCGATATCGAGTCTCGCCGCCACGTCGGCACTTGCTGC
CGGCACGACCGCAGGAACCACGATCACCAATACTGCCACTGTCGATTTTCAGGTCGGTGGCGTCGCCCAGGTGCAACAAT
CCGCGTCGGATAATTTCACCGTCGACCGCAAGATCAACCTGCTCGTCGAAGAAGTCGGCACCGTCACCACCAATGTTGTT
CCGGGCCAGACCAACGCCGTGACGACGTTTCAGCTCACCAACAGCTCGAACGAAGTGCTCGATTTCGCGCTCGTTGCCTC
GCAGATCGCGGGCGGCACTGCCGCGCATGGCGGCACCGACAGCTTCGATGCCACCAATGTTCGTATCTATCGCGACAACA
TATCATCGGGAACGGTCGGCAGTTGGGACGCGGCCGACACGCTGATTTCGGGCTATATCGACGAACTCGTTGTCGATACC
GCGATCCGGCTGTTCGTCGTCGCCGACATTCCGGCGGCGCTTGCCAACAATGCCGTCGCCGGGGTGACGCTTCGCGCCAC
CGCGCGCGAGGGCGGCACCGCGGGCAGCCAGGGCGCGGCGATCACCGAAACCACCGGCGCAAACACCGCGGGCAAGGACA
CCGTCTTTGCCGACACCGCGGGCGTCACGGGCGACGCCGGGCGCGACGGATCGCATAGCGACAATGACGATTATACGGTG
CAGACGGCGACCCTGACGGTCACCAAGACCAGCCGCGTCATCTCTGACCCGTTCAACAATACGACCAATCCGAAACTGAT
TCCGGGCGCCGTTGTCGAATACTGCATCGCGGTGGCCAATTCGGGCAGCGCCGACGCGACCTCGGTCGCGATCAACGATC
CCGTGCCGGGACAGCTGAGCTTCAGCGCCGGAACGATCCGGCTGGGCGGCACCGTCACTGCGGGCACATGCAACGCCGAC
GGCGCCGTGGGCGGCAGCTATTCGGCGCCCAACGTGTCGGGGACGATCGCGACGATCGCGGCCGGGGCGACGCGCACCCT
CGTTTTCCGCGCCACGGTCAACTGA

Upstream 100 bases:

>100_bases
CATGTTTCGGGGAATCGTCAAATAGCGACTGCATAATAACCGCTTAACGATTGCCAGCGGTGGGGAATGGGCAATCGAAC
CAAACCAAGGAGCTTCAGCT

Downstream 100 bases:

>100_bases
CCGCGTAACGGACGGACGCGGCGGCGCCCCGGCTCGACCGGGCGCCGCCGCTTCCTTCGGGGCTGGCATGGCGATCCGCG
ATACATATTTCGGCCTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MTSKLNTVGFIGLAAISSLAATSALAAGTTAGTTITNTATVDFQVGGVAQVQQSASDNFTVDRKINLLVEEVGTVTTNVV
PGQTNAVTTFQLTNSSNEVLDFALVASQIAGGTAAHGGTDSFDATNVRIYRDNISSGTVGSWDAADTLISGYIDELVVDT
AIRLFVVADIPAALANNAVAGVTLRATAREGGTAGSQGAAITETTGANTAGKDTVFADTAGVTGDAGRDGSHSDNDDYTV
QTATLTVTKTSRVISDPFNNTTNPKLIPGAVVEYCIAVANSGSADATSVAINDPVPGQLSFSAGTIRLGGTVTAGTCNAD
GAVGGSYSAPNVSGTIATIAAGATRTLVFRATVN

Sequences:

>Translated_354_residues
MTSKLNTVGFIGLAAISSLAATSALAAGTTAGTTITNTATVDFQVGGVAQVQQSASDNFTVDRKINLLVEEVGTVTTNVV
PGQTNAVTTFQLTNSSNEVLDFALVASQIAGGTAAHGGTDSFDATNVRIYRDNISSGTVGSWDAADTLISGYIDELVVDT
AIRLFVVADIPAALANNAVAGVTLRATAREGGTAGSQGAAITETTGANTAGKDTVFADTAGVTGDAGRDGSHSDNDDYTV
QTATLTVTKTSRVISDPFNNTTNPKLIPGAVVEYCIAVANSGSADATSVAINDPVPGQLSFSAGTIRLGGTVTAGTCNAD
GAVGGSYSAPNVSGTIATIAAGATRTLVFRATVN
>Mature_353_residues
TSKLNTVGFIGLAAISSLAATSALAAGTTAGTTITNTATVDFQVGGVAQVQQSASDNFTVDRKINLLVEEVGTVTTNVVP
GQTNAVTTFQLTNSSNEVLDFALVASQIAGGTAAHGGTDSFDATNVRIYRDNISSGTVGSWDAADTLISGYIDELVVDTA
IRLFVVADIPAALANNAVAGVTLRATAREGGTAGSQGAAITETTGANTAGKDTVFADTAGVTGDAGRDGSHSDNDDYTVQ
TATLTVTKTSRVISDPFNNTTNPKLIPGAVVEYCIAVANSGSADATSVAINDPVPGQLSFSAGTIRLGGTVTAGTCNADG
AVGGSYSAPNVSGTIATIAAGATRTLVFRATVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35312; Mature: 35181

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKLNTVGFIGLAAISSLAATSALAAGTTAGTTITNTATVDFQVGGVAQVQQSASDNFT
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECEEEEEEEECCHHHHHHCCCCCEE
VDRKINLLVEEVGTVTTNVVPGQTNAVTTFQLTNSSNEVLDFALVASQIAGGTAAHGGTD
EEHHHHHHHHHHCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
SFDATNVRIYRDNISSGTVGSWDAADTLISGYIDELVVDTAIRLFVVADIPAALANNAVA
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHCCCEE
GVTLRATAREGGTAGSQGAAITETTGANTAGKDTVFADTAGVTGDAGRDGSHSDNDDYTV
EEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEE
QTATLTVTKTSRVISDPFNNTTNPKLIPGAVVEYCIAVANSGSADATSVAINDPVPGQLS
EEEEEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEE
FSAGTIRLGGTVTAGTCNADGAVGGSYSAPNVSGTIATIAAGATRTLVFRATVN
ECCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECC
>Mature Secondary Structure 
TSKLNTVGFIGLAAISSLAATSALAAGTTAGTTITNTATVDFQVGGVAQVQQSASDNFT
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECEEEEEEEECCHHHHHHCCCCCEE
VDRKINLLVEEVGTVTTNVVPGQTNAVTTFQLTNSSNEVLDFALVASQIAGGTAAHGGTD
EEHHHHHHHHHHCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
SFDATNVRIYRDNISSGTVGSWDAADTLISGYIDELVVDTAIRLFVVADIPAALANNAVA
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHCCCEE
GVTLRATAREGGTAGSQGAAITETTGANTAGKDTVFADTAGVTGDAGRDGSHSDNDDYTV
EEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEE
QTATLTVTKTSRVISDPFNNTTNPKLIPGAVVEYCIAVANSGSADATSVAINDPVPGQLS
EEEEEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEE
FSAGTIRLGGTVTAGTCNADGAVGGSYSAPNVSGTIATIAAGATRTLVFRATVN
ECCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA