| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486802
Identifier: 103486802
GI number: 103486802
Start: 1374254
End: 1374580
Strand: Direct
Name: 103486802
Synonym: Sala_1316
Alternate gene names: NA
Gene position: 1374254-1374580 (Clockwise)
Preceding gene: 103486798
Following gene: 103486807
Centisome position: 41.08
GC content: 65.44
Gene sequence:
>327_bases GTGAATACGCCGTTGCCCGACGGCAGCAACGTCGCGCTCGGCCAGAAAGCCTTTGTCGACGGCCCGATCGTCGAACCGGT TGCGATCATCGAGGACAGCCGCTGCCCGATGAACGCGCGCTGCGTCTGGGCCGGTCGCGTACGGGTGCAGATGCTGTGGC ACCGCGGCAATGGCGATAAACAGCCCTTCGAGGTGACGCTGGGCGAGCCGACCCATCTGGCCGACGGGCAGTTCACGCTC GAATCGGTGCGGCCGGAAAGGCGTACCGACGTGACGCTGAAGTCCGCCGACTATCGTTTCTCGTTCCGCTTCGCTGGCGG GCTATAG
Upstream 100 bases:
>100_bases TCATAGCGACGCCGCCAGATGCGGGCAAATGCAGAAGATCATGCACCTTGCGACCGTCGCCTTTCCTTCCGCTCTCCTCC TTTCCGCCTGTGCAACGACC
Downstream 100 bases:
>100_bases GCCGCAAGCGTCAGCGAGGGTGGCGACAAGCGGCCAGCCGCCGCTCGCCGCCCCTCTCCCATCACGTCAGGCCACGGAGG CCGCGTGAATCTCGTCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MNTPLPDGSNVALGQKAFVDGPIVEPVAIIEDSRCPMNARCVWAGRVRVQMLWHRGNGDKQPFEVTLGEPTHLADGQFTL ESVRPERRTDVTLKSADYRFSFRFAGGL
Sequences:
>Translated_108_residues MNTPLPDGSNVALGQKAFVDGPIVEPVAIIEDSRCPMNARCVWAGRVRVQMLWHRGNGDKQPFEVTLGEPTHLADGQFTL ESVRPERRTDVTLKSADYRFSFRFAGGL >Mature_108_residues MNTPLPDGSNVALGQKAFVDGPIVEPVAIIEDSRCPMNARCVWAGRVRVQMLWHRGNGDKQPFEVTLGEPTHLADGQFTL ESVRPERRTDVTLKSADYRFSFRFAGGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12001; Mature: 12001
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPLPDGSNVALGQKAFVDGPIVEPVAIIEDSRCPMNARCVWAGRVRVQMLWHRGNGDK CCCCCCCCCCEEECCEECCCCCCCCEEEEEECCCCCCCCEEEEECCEEEEEEEECCCCCC QPFEVTLGEPTHLADGQFTLESVRPERRTDVTLKSADYRFSFRFAGGL CCEEEECCCCCEECCCEEEEECCCCCCCCCEEEECCCEEEEEEECCCC >Mature Secondary Structure MNTPLPDGSNVALGQKAFVDGPIVEPVAIIEDSRCPMNARCVWAGRVRVQMLWHRGNGDK CCCCCCCCCCEEECCEECCCCCCCCEEEEEECCCCCCCCEEEEECCEEEEEEEECCCCCC QPFEVTLGEPTHLADGQFTLESVRPERRTDVTLKSADYRFSFRFAGGL CCEEEECCCCCEECCCEEEEECCCCCCCCCEEEECCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA