| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is plsY [H]
Identifier: 103486696
GI number: 103486696
Start: 1249061
End: 1249663
Strand: Direct
Name: plsY [H]
Synonym: Sala_1208
Alternate gene names: 103486696
Gene position: 1249061-1249663 (Clockwise)
Preceding gene: 103486691
Following gene: 103486697
Centisome position: 37.34
GC content: 67.83
Gene sequence:
>603_bases ATGACCATCTATCTGTTGATCGCCGGCGGTTATCTGCTCGGTTCCATTCCCTTCGGCGTCCTGCTGACGCGCGCATTCGG CGCGGGCGACTTGCGGCAGATCGGGTCGGGCAATATCGGCGCGACCAATGTGCTGCGCACCGGCCGCAAGGGGCTGGCGG CGGCGACCCTGCTGCTCGACGGCGCGAAGGGCGCGGCGGCGGTGTTGCTCGCACGGCATTTCGTGCCCCAGCTTGGCGAT CATGCTGCGATGATCGCGGGCGCCGCGGCGATGATCGGTCATTGCTATCCGGTGTGGCTGAAGTTTCGCGGCGGCAAGGG CGTTGCCACGCTGCTTGGTCTTGCACTCGCGCTTGCCTGGCCCATCGGCCTGATCTTTGCGGCGGTGTGGCTTGGCACCG TGTTGCTGCTGCGTTTCTCCTCGCTCGGCGGGATGCTCGGCGCGGTGTCGGCCCCAGTTGCGGCGTTTGCGTTCGACTAT CCGGTTTACGCCGTCGGACTCGCCGGGCTTGCGGTGATCGTGCTCTGGCGGCACCGCGAGAATATCGCGCGGCTGCGCGC CGGGACAGAGCCGCGCGTCGGCGCCGCGAAAGAGCGCGCATGA
Upstream 100 bases:
>100_bases CCGAGATGACGGGTTTATCCATTTCGGATGGCGATGTGTCCGAATCCGTTGATTGCTTTCCCCAACCCAGCCAAAAGGGC ACAACATAACGAGGAGTGAG
Downstream 100 bases:
>100_bases AGGACGCCGAGCGGCTGGCGCGTCTGCGGCTTATCCGCACCCCGCACGTCGGCCCGGTCAGCTGGCACCAGTTGATGGAG CGTTTCGGTTCGGGCGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTIYLLIAGGYLLGSIPFGVLLTRAFGAGDLRQIGSGNIGATNVLRTGRKGLAAATLLLDGAKGAAAVLLARHFVPQLGD HAAMIAGAAAMIGHCYPVWLKFRGGKGVATLLGLALALAWPIGLIFAAVWLGTVLLLRFSSLGGMLGAVSAPVAAFAFDY PVYAVGLAGLAVIVLWRHRENIARLRAGTEPRVGAAKERA
Sequences:
>Translated_200_residues MTIYLLIAGGYLLGSIPFGVLLTRAFGAGDLRQIGSGNIGATNVLRTGRKGLAAATLLLDGAKGAAAVLLARHFVPQLGD HAAMIAGAAAMIGHCYPVWLKFRGGKGVATLLGLALALAWPIGLIFAAVWLGTVLLLRFSSLGGMLGAVSAPVAAFAFDY PVYAVGLAGLAVIVLWRHRENIARLRAGTEPRVGAAKERA >Mature_199_residues TIYLLIAGGYLLGSIPFGVLLTRAFGAGDLRQIGSGNIGATNVLRTGRKGLAAATLLLDGAKGAAAVLLARHFVPQLGDH AAMIAGAAAMIGHCYPVWLKFRGGKGVATLLGLALALAWPIGLIFAAVWLGTVLLLRFSSLGGMLGAVSAPVAAFAFDYP VYAVGLAGLAVIVLWRHRENIARLRAGTEPRVGAAKERA
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP [H]
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family [H]
Homologues:
Organism=Escherichia coli, GI1789439, Length=191, Percent_Identity=39.7905759162304, Blast_Score=112, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003811 [H]
Pfam domain/function: PF02660 DUF205 [H]
EC number: NA
Molecular weight: Translated: 20612; Mature: 20481
Theoretical pI: Translated: 11.24; Mature: 11.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIYLLIAGGYLLGSIPFGVLLTRAFGAGDLRQIGSGNIGATNVLRTGRKGLAAATLLLD CEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHC GAKGAAAVLLARHFVPQLGDHAAMIAGAAAMIGHCYPVWLKFRGGKGVATLLGLALALAW CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHH PIGLIFAAVWLGTVLLLRFSSLGGMLGAVSAPVAAFAFDYPVYAVGLAGLAVIVLWRHRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH NIARLRAGTEPRVGAAKERA HHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TIYLLIAGGYLLGSIPFGVLLTRAFGAGDLRQIGSGNIGATNVLRTGRKGLAAATLLLD EEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHC GAKGAAAVLLARHFVPQLGDHAAMIAGAAAMIGHCYPVWLKFRGGKGVATLLGLALALAW CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHH PIGLIFAAVWLGTVLLLRFSSLGGMLGAVSAPVAAFAFDYPVYAVGLAGLAVIVLWRHRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH NIARLRAGTEPRVGAAKERA HHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA