| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is trpE [H]
Identifier: 103486662
GI number: 103486662
Start: 1209690
End: 1211207
Strand: Direct
Name: trpE [H]
Synonym: Sala_1174
Alternate gene names: 103486662
Gene position: 1209690-1211207 (Clockwise)
Preceding gene: 103486661
Following gene: 103486663
Centisome position: 36.16
GC content: 67.79
Gene sequence:
>1518_bases GTGACCCTGGAAGGCAGGGCCGCCGCGCTCGAAGCGCTGGCAGGGGGGCACGGCGCGGTCGTCTGGCAACGGTTGATCGC CGACATCGAAACGCCGGTGTCGGCGGCGCTCAAGCTCATCGAACCGGAGCGCGGCGACTGGGTGCTCGAATCGGTCGAAA GCGGCGAAACGCGGGGCCGTTACAGCCTGATCGGCCTCGATCCCGATCTGATGTTCGAAGTGCGCGGCGACGCGGCGCGC ATCAACCGCGACTGGCGGCATGACCGCGATGCCTTTGTCCCGGTCGAGGCAGGCGCCTTGCAGGCGCTGCGCGATCTGGT AGCCGAATGCCGGTTTGACGTGCCCGAAGGATTGCCCAAGGCGCTTGCGACGCTCGTGGGCTTCTTTGCCTATGAAACCA TCGGCCTCGTTGAACGCATTCCGCGGGCGCCGGGCGCGGGCCTCGGCCTGCCCGACATGATTTTCGTGCGCCCGACGACG ATCCTCGTCTTCGACCGGCTGGCTGACGAACTGTTCCTGATCGCGCCGATCTGGCCCGACGCGCGCGGTGCCATCGACCG GATGATCGATACCGCCGGAGAGCGGCTCGAAAGCATCGCGGCGCGACTATCGAGCGCGAGCCCGCACGCCGATGGGGCCT CGACCGCGGCGCTGACCCAAAGCATCACGGCGACGCCCGCGACGTCTCCTGAGCGCTTCGCGGCAATGGTCGCGGCGGCG AAGGATTATATTGCGGCGGGCGATATTTTTCAGGTGGTGCTCTCGCAGCGTTTCTCGACCCCGTTCGACCTGCCGCCTTT CGACCTTTACCGCGCGCTTCGCCGCGTCAACCCGTCGCCCTTCCTCTATTTTCTCGACCTGCCGGGCTTTGCGCTGATCG GCTCGTCGCCCGAGATACTGGTGCGGGTGCGCGACGGCGAAATCACGATCCGCCCGATCGCGGGCACGCGCCCACGCGGG CGCACGAGTGCGGAGGACGCCGAGAATCGCGAAAGCCTGCTCGCCGATCCCAAGGAGCGCGCCGAGCATCTGATGTTGCT CGACCTGGGCCGCAATGACGTCGGCCGGGCAGCGATCGGCGGCAGCGTGTCCGTGACCGACAGCTACACGGTCGAGTTCT ACAGCCATGTGATGCACATCGTGTCGAATGTCATCGGCCGCATCGCGCCGGGCAAGGACGCGATCGACGCGCTGTTCGCG GGCTTCCCCGCCGGAACCGTCAGTGGCGCGCCCAAGGTTCGCGCGTGCCAGATCATTGCCGAACTGGAAGCCGATGCGCG CGGCCCCTATGCGGGCGGCGTCGGCTATTTCGCGCCCGACGGCAATATGGACAGCTGCATCGTGCTGCGCACCGCGATCG TCAAGGACGGCGTGATGCACGTCCAGGCGGGTGCGGGGATCGTCGCCGACAGCGACCCGGCTTACGAACAGCGTGAGTGC GAGGCGAAGGCGGGAGCGCTCTTTGCCGCGGCGCGCGAGGCGGTGCGGATCGCGGGGACCGCGGGATACGGGCAGTAG
Upstream 100 bases:
>100_bases CCGCCGAGGCCAGGCGGCGCGTCGGGGTGACGATCAACAAGGGGCTGGTCGACCAGCTGCGCCGCGAGCTGACCGGCACC GCGCCGGTCGCCGAATAAGC
Downstream 100 bases:
>100_bases GATTTCGGCCAAAGGCAAATCATTGCCCGCACCCGCCGGAATCACAACGCCCGGGCCTTGTTCCCAAGACCCGGGCGCCT GTGACGAACACTCGCCATCC
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MTLEGRAAALEALAGGHGAVVWQRLIADIETPVSAALKLIEPERGDWVLESVESGETRGRYSLIGLDPDLMFEVRGDAAR INRDWRHDRDAFVPVEAGALQALRDLVAECRFDVPEGLPKALATLVGFFAYETIGLVERIPRAPGAGLGLPDMIFVRPTT ILVFDRLADELFLIAPIWPDARGAIDRMIDTAGERLESIAARLSSASPHADGASTAALTQSITATPATSPERFAAMVAAA KDYIAAGDIFQVVLSQRFSTPFDLPPFDLYRALRRVNPSPFLYFLDLPGFALIGSSPEILVRVRDGEITIRPIAGTRPRG RTSAEDAENRESLLADPKERAEHLMLLDLGRNDVGRAAIGGSVSVTDSYTVEFYSHVMHIVSNVIGRIAPGKDAIDALFA GFPAGTVSGAPKVRACQIIAELEADARGPYAGGVGYFAPDGNMDSCIVLRTAIVKDGVMHVQAGAGIVADSDPAYEQREC EAKAGALFAAAREAVRIAGTAGYGQ
Sequences:
>Translated_505_residues MTLEGRAAALEALAGGHGAVVWQRLIADIETPVSAALKLIEPERGDWVLESVESGETRGRYSLIGLDPDLMFEVRGDAAR INRDWRHDRDAFVPVEAGALQALRDLVAECRFDVPEGLPKALATLVGFFAYETIGLVERIPRAPGAGLGLPDMIFVRPTT ILVFDRLADELFLIAPIWPDARGAIDRMIDTAGERLESIAARLSSASPHADGASTAALTQSITATPATSPERFAAMVAAA KDYIAAGDIFQVVLSQRFSTPFDLPPFDLYRALRRVNPSPFLYFLDLPGFALIGSSPEILVRVRDGEITIRPIAGTRPRG RTSAEDAENRESLLADPKERAEHLMLLDLGRNDVGRAAIGGSVSVTDSYTVEFYSHVMHIVSNVIGRIAPGKDAIDALFA GFPAGTVSGAPKVRACQIIAELEADARGPYAGGVGYFAPDGNMDSCIVLRTAIVKDGVMHVQAGAGIVADSDPAYEQREC EAKAGALFAAAREAVRIAGTAGYGQ >Mature_504_residues TLEGRAAALEALAGGHGAVVWQRLIADIETPVSAALKLIEPERGDWVLESVESGETRGRYSLIGLDPDLMFEVRGDAARI NRDWRHDRDAFVPVEAGALQALRDLVAECRFDVPEGLPKALATLVGFFAYETIGLVERIPRAPGAGLGLPDMIFVRPTTI LVFDRLADELFLIAPIWPDARGAIDRMIDTAGERLESIAARLSSASPHADGASTAALTQSITATPATSPERFAAMVAAAK DYIAAGDIFQVVLSQRFSTPFDLPPFDLYRALRRVNPSPFLYFLDLPGFALIGSSPEILVRVRDGEITIRPIAGTRPRGR TSAEDAENRESLLADPKERAEHLMLLDLGRNDVGRAAIGGSVSVTDSYTVEFYSHVMHIVSNVIGRIAPGKDAIDALFAG FPAGTVSGAPKVRACQIIAELEADARGPYAGGVGYFAPDGNMDSCIVLRTAIVKDGVMHVQAGAGIVADSDPAYEQRECE AKAGALFAAAREAVRIAGTAGYGQ
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=372, Percent_Identity=39.247311827957, Blast_Score=231, Evalue=1e-61, Organism=Escherichia coli, GI1788114, Length=391, Percent_Identity=33.5038363171356, Blast_Score=191, Evalue=1e-49, Organism=Escherichia coli, GI87082077, Length=262, Percent_Identity=28.2442748091603, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1786809, Length=265, Percent_Identity=30.188679245283, Blast_Score=84, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6320935, Length=471, Percent_Identity=37.1549893842887, Blast_Score=262, Evalue=8e-71, Organism=Saccharomyces cerevisiae, GI6324361, Length=269, Percent_Identity=27.5092936802974, Blast_Score=94, Evalue=7e-20,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 53892; Mature: 53761
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLEGRAAALEALAGGHGAVVWQRLIADIETPVSAALKLIEPERGDWVLESVESGETRGR CCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCC YSLIGLDPDLMFEVRGDAARINRDWRHDRDAFVPVEAGALQALRDLVAECRFDVPEGLPK EEEEECCCCEEEEECCCHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCHHH ALATLVGFFAYETIGLVERIPRAPGAGLGLPDMIFVRPTTILVFDRLADELFLIAPIWPD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCEEEEEECCCC ARGAIDRMIDTAGERLESIAARLSSASPHADGASTAALTQSITATPATSPERFAAMVAAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH KDYIAAGDIFQVVLSQRFSTPFDLPPFDLYRALRRVNPSPFLYFLDLPGFALIGSSPEIL HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEE VRVRDGEITIRPIAGTRPRGRTSAEDAENRESLLADPKERAEHLMLLDLGRNDVGRAAIG EEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHCEEEEEECCCCCCCCEECC GSVSVTDSYTVEFYSHVMHIVSNVIGRIAPGKDAIDALFAGFPAGTVSGAPKVRACQIIA CCEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH ELEADARGPYAGGVGYFAPDGNMDSCIVLRTAIVKDGVMHVQAGAGIVADSDPAYEQREC HHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCEEEECCCCEEECCCCCHHHHHH EAKAGALFAAAREAVRIAGTAGYGQ HHHHHHHHHHHHHHHEEECCCCCCC >Mature Secondary Structure TLEGRAAALEALAGGHGAVVWQRLIADIETPVSAALKLIEPERGDWVLESVESGETRGR CCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCC YSLIGLDPDLMFEVRGDAARINRDWRHDRDAFVPVEAGALQALRDLVAECRFDVPEGLPK EEEEECCCCEEEEECCCHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCHHH ALATLVGFFAYETIGLVERIPRAPGAGLGLPDMIFVRPTTILVFDRLADELFLIAPIWPD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCEEEEEECCCC ARGAIDRMIDTAGERLESIAARLSSASPHADGASTAALTQSITATPATSPERFAAMVAAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH KDYIAAGDIFQVVLSQRFSTPFDLPPFDLYRALRRVNPSPFLYFLDLPGFALIGSSPEIL HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEE VRVRDGEITIRPIAGTRPRGRTSAEDAENRESLLADPKERAEHLMLLDLGRNDVGRAAIG EEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHCEEEEEECCCCCCCCEECC GSVSVTDSYTVEFYSHVMHIVSNVIGRIAPGKDAIDALFAGFPAGTVSGAPKVRACQIIA CCEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH ELEADARGPYAGGVGYFAPDGNMDSCIVLRTAIVKDGVMHVQAGAGIVADSDPAYEQREC HHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCEEEECCCCEEECCCCCHHHHHH EAKAGALFAAAREAVRIAGTAGYGQ HHHHHHHHHHHHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA