| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is mgtE [H]
Identifier: 103486635
GI number: 103486635
Start: 1182257
End: 1183696
Strand: Reverse
Name: mgtE [H]
Synonym: Sala_1147
Alternate gene names: 103486635
Gene position: 1183696-1182257 (Counterclockwise)
Preceding gene: 103486637
Following gene: 103486634
Centisome position: 35.39
GC content: 65.35
Gene sequence:
>1440_bases ATGGACGAACGCGAAGAATCCCAGCGGCCCGAGGATGTGGCGATCGCGGAAGAGCGCGACGATTTTCCCCTCGAAACCGA ACTGGACGAAGACGACCGGCTGAAACCCGATTTTGTGCGCGACGTGATCGGCCTCGCCGAAGCGGGTGAAGGCGAAGCGG CGCGCGAACGCATCGGCCGCCTGCACCCCGCCGACATCGCGGACCTGTTCGAACTCGCGCGCTCCGACGAGCGCCCGATG CTCGCCGCCGTGCTCGGCGACATGCTCTCCGCCGACGTGCTCGCGGAAATGAACGATTATGTGCGCGAGGAACTGATCGA CCTCCTTGCGCCCGAGCAGGTCGCCGAACTCGCGTCCGAACTCGATACCGACGACGCCGTTGCGATCATCGAGGACATGG AAGCCGACGAGCAGCAGGCGGTGCTCGAGGCGATGCAACCCGAAGATCGCGCCGCGATCGAGGATGCGCTTTCCTTCCCT GAGGAATCGGCCGGCCGCCTGATGCAGCGCGACCTCGTCGCGGTGCCCGAGCATGTCACCGTCGGCGACGTGATTGACCG GCTGCGCGAGGACGCCGACCTGACCAGCGATTTCTGGGAAATCTTTGTCGTCGATCCGATGCACCGGCCGGTCGGCTCCT GCCAGCTGAGCTGGATCCTCCGCACCCCGCGCGACATTGCGATCAGCGACGTGATGAGGCGCGAACAGACGCTGATCCCC GTCGACATGGATCAGGAGGAGGTCGCACTGCGCTTTCAGAAATATGCGCTGATCTCCGCCGCGGTCGTCGACAAGGCGGG GCGCCTCGTCGGCATGATCACGGTCGACGACATCGTCCACATCATCCAGGAAGAGGCGGGAGAGGATATATTGCGCCTGT CGGGCGCAGGCGACGGCGACATCAACGAGCCGATCCGTGAAACCTACACGGCGCGCGTGCGCTGGCTGATCGCCAACCTC GGCACCGCGCTCGTCGCATCGACCATCGTTGGCCTGTTCGGAGGCGCGATCGAGCAGATGGTCGCGCTTGCCGCGCTGAT GCCGATCGTCGCCGGGGTCGGCGGCAATGCGGGAACGCAAACGCTGGCCGTCACGGTGCGCGCGCTCGCGATGAACCAGC TGACCGATTCGAACAGCTGGCGCGCGATCTGGCGCGAAATGACGATCGCGCTGCTCAACGGCGCGACGATCGCGCTGGTG GCGGGAACGGCAACCGCCCTGTGGTTCGCAAATCCGACGCTCGGCGCCGTTATTGGCGCGGCGATGATCGTCAATATCTT CGTCGCGGGCGTCGCCGGGGTCGCGATCCCGCTATTGCTCGACCGGCTCGATCAGGACCCGGCGGTCGCCAGTTCGATCT TCGTGACGATGACCACCGATTCGATGGGATTTCTGGCCTTCCTCGGCCTCGCGGTGCTCAGTGGCCTGACGACGTTATAG
Upstream 100 bases:
>100_bases ACGCCCAAAATCGTTAAAAGATGTTCGCGGCGTTGCCATCGGCGGGTGGCCGCTCTAGGGGAAAAGCCGGACGCCGCCAA AGATGAGGGAGGACCGCGCG
Downstream 100 bases:
>100_bases CTTGGAGCGGCGTGATCCCAACCCTCTCGAATCATTGGGTCAAAATGATGGCCGCTAAAAAAAGTCCTTGCTGTCGTTTT TTTCGGGAACAAATCGGCCG
Product: magnesium transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MDEREESQRPEDVAIAEERDDFPLETELDEDDRLKPDFVRDVIGLAEAGEGEAARERIGRLHPADIADLFELARSDERPM LAAVLGDMLSADVLAEMNDYVREELIDLLAPEQVAELASELDTDDAVAIIEDMEADEQQAVLEAMQPEDRAAIEDALSFP EESAGRLMQRDLVAVPEHVTVGDVIDRLREDADLTSDFWEIFVVDPMHRPVGSCQLSWILRTPRDIAISDVMRREQTLIP VDMDQEEVALRFQKYALISAAVVDKAGRLVGMITVDDIVHIIQEEAGEDILRLSGAGDGDINEPIRETYTARVRWLIANL GTALVASTIVGLFGGAIEQMVALAALMPIVAGVGGNAGTQTLAVTVRALAMNQLTDSNSWRAIWREMTIALLNGATIALV AGTATALWFANPTLGAVIGAAMIVNIFVAGVAGVAIPLLLDRLDQDPAVASSIFVTMTTDSMGFLAFLGLAVLSGLTTL
Sequences:
>Translated_479_residues MDEREESQRPEDVAIAEERDDFPLETELDEDDRLKPDFVRDVIGLAEAGEGEAARERIGRLHPADIADLFELARSDERPM LAAVLGDMLSADVLAEMNDYVREELIDLLAPEQVAELASELDTDDAVAIIEDMEADEQQAVLEAMQPEDRAAIEDALSFP EESAGRLMQRDLVAVPEHVTVGDVIDRLREDADLTSDFWEIFVVDPMHRPVGSCQLSWILRTPRDIAISDVMRREQTLIP VDMDQEEVALRFQKYALISAAVVDKAGRLVGMITVDDIVHIIQEEAGEDILRLSGAGDGDINEPIRETYTARVRWLIANL GTALVASTIVGLFGGAIEQMVALAALMPIVAGVGGNAGTQTLAVTVRALAMNQLTDSNSWRAIWREMTIALLNGATIALV AGTATALWFANPTLGAVIGAAMIVNIFVAGVAGVAIPLLLDRLDQDPAVASSIFVTMTTDSMGFLAFLGLAVLSGLTTL >Mature_479_residues MDEREESQRPEDVAIAEERDDFPLETELDEDDRLKPDFVRDVIGLAEAGEGEAARERIGRLHPADIADLFELARSDERPM LAAVLGDMLSADVLAEMNDYVREELIDLLAPEQVAELASELDTDDAVAIIEDMEADEQQAVLEAMQPEDRAAIEDALSFP EESAGRLMQRDLVAVPEHVTVGDVIDRLREDADLTSDFWEIFVVDPMHRPVGSCQLSWILRTPRDIAISDVMRREQTLIP VDMDQEEVALRFQKYALISAAVVDKAGRLVGMITVDDIVHIIQEEAGEDILRLSGAGDGDINEPIRETYTARVRWLIANL GTALVASTIVGLFGGAIEQMVALAALMPIVAGVGGNAGTQTLAVTVRALAMNQLTDSNSWRAIWREMTIALLNGATIALV AGTATALWFANPTLGAVIGAAMIVNIFVAGVAGVAIPLLLDRLDQDPAVASSIFVTMTTDSMGFLAFLGLAVLSGLTTL
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 51841; Mature: 51841
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEREESQRPEDVAIAEERDDFPLETELDEDDRLKPDFVRDVIGLAEAGEGEAARERIGR CCCCCHHCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCC LHPADIADLFELARSDERPMLAAVLGDMLSADVLAEMNDYVREELIDLLAPEQVAELASE CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LDTDDAVAIIEDMEADEQQAVLEAMQPEDRAAIEDALSFPEESAGRLMQRDLVAVPEHVT CCCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC VGDVIDRLREDADLTSDFWEIFVVDPMHRPVGSCQLSWILRTPRDIAISDVMRREQTLIP HHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCC VDMDQEEVALRFQKYALISAAVVDKAGRLVGMITVDDIVHIIQEEAGEDILRLSGAGDGD CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCHHEEECCCCCCC INEPIRETYTARVRWLIANLGTALVASTIVGLFGGAIEQMVALAALMPIVAGVGGNAGTQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TLAVTVRALAMNQLTDSNSWRAIWREMTIALLNGATIALVAGTATALWFANPTLGAVIGA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHEEEECCCHHHHHHHH AMIVNIFVAGVAGVAIPLLLDRLDQDPAVASSIFVTMTTDSMGFLAFLGLAVLSGLTTL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDEREESQRPEDVAIAEERDDFPLETELDEDDRLKPDFVRDVIGLAEAGEGEAARERIGR CCCCCHHCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCC LHPADIADLFELARSDERPMLAAVLGDMLSADVLAEMNDYVREELIDLLAPEQVAELASE CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LDTDDAVAIIEDMEADEQQAVLEAMQPEDRAAIEDALSFPEESAGRLMQRDLVAVPEHVT CCCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC VGDVIDRLREDADLTSDFWEIFVVDPMHRPVGSCQLSWILRTPRDIAISDVMRREQTLIP HHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCC VDMDQEEVALRFQKYALISAAVVDKAGRLVGMITVDDIVHIIQEEAGEDILRLSGAGDGD CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCHHEEECCCCCCC INEPIRETYTARVRWLIANLGTALVASTIVGLFGGAIEQMVALAALMPIVAGVGGNAGTQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TLAVTVRALAMNQLTDSNSWRAIWREMTIALLNGATIALVAGTATALWFANPTLGAVIGA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHEEEECCCHHHHHHHH AMIVNIFVAGVAGVAIPLLLDRLDQDPAVASSIFVTMTTDSMGFLAFLGLAVLSGLTTL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]