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The map label for this gene is scpA [H]

Identifier: 103486629

GI number: 103486629

Start: 1178998

End: 1179810

Strand: Direct

Name: scpA [H]

Synonym: Sala_1141

Alternate gene names: 103486629

Gene position: 1178998-1179810 (Clockwise)

Preceding gene: 103486628

Following gene: 103486630

Centisome position: 35.24

GC content: 68.27

Gene sequence:

>813_bases
ATGCGCTGCTGGCGATGGTCTGACGCGCCGATGGAGGGTCTGCCGCTCGCATTCGACCCGCCGCCGCCGCCGGTTGCCCG
CGACGATGCGCTCCAGCTTTCTTTCGAAAGCTGGGAAGGCCCGCTCGATCTCCTGCTTGCGCTCGCGCGGAATCAGAAGG
TTGATCTTCGGGAGATTTCGATCCTGGCGCTGGTCGAGCAATATCTGCATTTCATCGCCGAAGCGCGCGAGCTCAAGCTG
GAGGTGGCGGCCGATTATCTGGTGATGGCGGCGTGGCTCGCCTATTTGAAGTCGGCGCTGCTGCTGCCCAAGGATCCGCT
GGAGGAGCCGTCGCCCGATGAGCTGGCGCTGCGCCTGCAACTGCGGCTCCAGCGGCTCGCCGCGATGCGCGAGGCCGCGG
CACGGCTGCTCGCGCGCGACCGCCTCGGCCGCGACGTCTTTCTGCGCCCGCGGCCCGAGGGGCTGCGCGATGTCAAGCGG
CGGCGCTGGGACGCCAGCCTCTACGACATTCTGGCGGCCTATGGCCAGGTCAAGCTACGGTCCGAGCCCGTGGTTCACAT
GGTGTCGCGGCGTCCGGTCATCACGCTCGACGCCGCGCTGCATCATCTGGAACGGATGCTCGGGGTCAAGCTCGACTGGG
GCGAGCTGGCCGATTTCCTGCCCGCCGACTATCAGGGCCTGCTCCGCCGGTCGGCGATCGCGTCGAGCTTCGTCGCGGCG
CTCGAACTCGCGCGTCAGGGACGGGTCGAGTTGAAACAGGGCGGCGCGTTCGAACCGCTCTACCTGCGGGCGGCAGGAGG
AGGGGGGGCATGA

Upstream 100 bases:

>100_bases
CCGATCAGCACGGTCTCGCGCGCGCGGCTTGAAGGCGCGATGGACCGGATCGCGGGCGCGCGTGACGAAGGCGAGTTCGC
CGCGCTCGTCGATCAGCGCG

Downstream 100 bases:

>100_bases
TCGACGATCTGGAGCGCGCGATCGAAGCGATGCTCTTTGCCAGCGACGAGCCGCTCGACGCGCGGCAGCTTGCCGCCCGC
CTGGGCGATGACATGGCGCC

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MRCWRWSDAPMEGLPLAFDPPPPPVARDDALQLSFESWEGPLDLLLALARNQKVDLREISILALVEQYLHFIAEARELKL
EVAADYLVMAAWLAYLKSALLLPKDPLEEPSPDELALRLQLRLQRLAAMREAAARLLARDRLGRDVFLRPRPEGLRDVKR
RRWDASLYDILAAYGQVKLRSEPVVHMVSRRPVITLDAALHHLERMLGVKLDWGELADFLPADYQGLLRRSAIASSFVAA
LELARQGRVELKQGGAFEPLYLRAAGGGGA

Sequences:

>Translated_270_residues
MRCWRWSDAPMEGLPLAFDPPPPPVARDDALQLSFESWEGPLDLLLALARNQKVDLREISILALVEQYLHFIAEARELKL
EVAADYLVMAAWLAYLKSALLLPKDPLEEPSPDELALRLQLRLQRLAAMREAAARLLARDRLGRDVFLRPRPEGLRDVKR
RRWDASLYDILAAYGQVKLRSEPVVHMVSRRPVITLDAALHHLERMLGVKLDWGELADFLPADYQGLLRRSAIASSFVAA
LELARQGRVELKQGGAFEPLYLRAAGGGGA
>Mature_270_residues
MRCWRWSDAPMEGLPLAFDPPPPPVARDDALQLSFESWEGPLDLLLALARNQKVDLREISILALVEQYLHFIAEARELKL
EVAADYLVMAAWLAYLKSALLLPKDPLEEPSPDELALRLQLRLQRLAAMREAAARLLARDRLGRDVFLRPRPEGLRDVKR
RRWDASLYDILAAYGQVKLRSEPVVHMVSRRPVITLDAALHHLERMLGVKLDWGELADFLPADYQGLLRRSAIASSFVAA
LELARQGRVELKQGGAFEPLYLRAAGGGGA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30369; Mature: 30369

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCWRWSDAPMEGLPLAFDPPPPPVARDDALQLSFESWEGPLDLLLALARNQKVDLREIS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHCCCHHHHHHHHHCCCCCCHHHHH
ILALVEQYLHFIAEARELKLEVAADYLVMAAWLAYLKSALLLPKDPLEEPSPDELALRLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
LRLQRLAAMREAAARLLARDRLGRDVFLRPRPEGLRDVKRRRWDASLYDILAAYGQVKLR
HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCEEEC
SEPVVHMVSRRPVITLDAALHHLERMLGVKLDWGELADFLPADYQGLLRRSAIASSFVAA
CCHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LELARQGRVELKQGGAFEPLYLRAAGGGGA
HHHHHCCCCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MRCWRWSDAPMEGLPLAFDPPPPPVARDDALQLSFESWEGPLDLLLALARNQKVDLREIS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHCCCHHHHHHHHHCCCCCCHHHHH
ILALVEQYLHFIAEARELKLEVAADYLVMAAWLAYLKSALLLPKDPLEEPSPDELALRLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
LRLQRLAAMREAAARLLARDRLGRDVFLRPRPEGLRDVKRRRWDASLYDILAAYGQVKLR
HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCEEEC
SEPVVHMVSRRPVITLDAALHHLERMLGVKLDWGELADFLPADYQGLLRRSAIASSFVAA
CCHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LELARQGRVELKQGGAFEPLYLRAAGGGGA
HHHHHCCCCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]