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The map label for this gene is 103486618

Identifier: 103486618

GI number: 103486618

Start: 1169026

End: 1170063

Strand: Reverse

Name: 103486618

Synonym: Sala_1130

Alternate gene names: NA

Gene position: 1170063-1169026 (Counterclockwise)

Preceding gene: 103486619

Following gene: 103486617

Centisome position: 34.98

GC content: 66.67

Gene sequence:

>1038_bases
ATGGATACGCGAAAGATTATGCTGATCGTCGGCGCGCTGGTGATTGCCATCGGCGCGGCATTCGGGGTCAACTATATGAT
GCGCGGAGCGGGGGCTCCCGCCGCACGGGCGGCCGCGGCGCCCGAGATCACGGGACCGATGATCCTGGTCGCGACGAGGC
AATTGCCCGTCGGCACGATCGTCGGGCCGGACAGTTTCCGGTTCCAGCCCTGGCCAAAAGATCTCGTCGAGAACGCCTAT
TTCGTGAAGGAAAAAACCGACGTGAACACGTTGGTCGGTACCGTCGTGCGCCATCCGATCACGGCAGGACAGCCGCTCAC
GCAGGGTGCCCTCGTCCATCCCAACGATCGCGGCTTCCTTGCCGCGGCGCTCGGGCCCGGTATGCGGGCGATCACCGTCA
AGGTGTCGCAGGAACAGGGCGTCGCGGGTTTCGTCTTTCCCGGCGACCGCGTCGACGTGGTGCTGACGCAGACGATCGAG
GTCGAGGAAGGCAGCACCTATCCCGACGACCAGATCTTCACCGCCGAGACCATCGTTCGCAACATCCGCGTGCTGGCAAC
CGACCAGCGCTATGACGCAGAGGACGAGACGGGCAAGACGCCGGTGCGCACCTTCGGTTCGGTGACGCTCGAAGCGACGC
CGGAGATTGCCGAAAAAATCGCCGTCGCACAGGGCATGGGCCGCCTGTCGCTCGCGCTCCGCCCGCTGGCCGAAAGCGCC
GGCGAACTCGACGCCGCGATCGCTTCGGGTGAAATCAACGTTCCGGCTTCGGGGGGCACCGCTGCCGAAAGGAAGATGCT
GGCGCAGGCCGCCGCGCGTCCGGTTGCCAGCCGTTCGTCGGCGACCACCGGTGGCGACGTGTCGCGCTTCTGGATCCCGG
TACGCGGGCGCGTCACTGCGCCGCGTCCGCAGCAGGCAGACAACAGGGGTGGTTATGCGCCGGCCAATGACGGTCGCGGA
GTGTCCGCGCCGACCGGCCCGGTCGTGCGCGTGACCCGCGGCGACAAGATGACCGAAGTTCCGGTTGGGGGTAAGTAA

Upstream 100 bases:

>100_bases
GGGCGCTTCACCAACACTATCTTAACCAGTTTCAGGCTATCGGTTTGTCCTGAGGGCAAGCACCGCCGTTTCCGGACGGT
GCAGGAGGCGAAAAATCGTC

Downstream 100 bases:

>100_bases
GATGAACAGCAAAGCCAATTTCAAGGCGGCGGCTCTGGCGCGCACCCTCGCCATCGGCCTCGTGGCAGCGACGCTGATAG
CGGCCCCGTCGCGACCCGTC

Product: Flp pilus assembly CpaB

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein CpaB; Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Flp Pilus Assembly Protein; CtpC Protein; Flp Pilus Assembly Protein Cpab; Flp Pilus Assembly Protein RcpC/CpaB; CpaB Pilus Assembly Protein; Pilus Assembly-Related Exported Protein; Fimbriae-Assembly Related Protein; Pilus Assembly Domain-Containing Protein; CpaB2 Pilus Assembly Protein; CpaB2 Flp Pilus Assembly Protein CpaB; Component Of Type IV Pilus; SAF Domain Protein; Flp Pilus Assembly Protein CpaB-Like Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MDTRKIMLIVGALVIAIGAAFGVNYMMRGAGAPAARAAAAPEITGPMILVATRQLPVGTIVGPDSFRFQPWPKDLVENAY
FVKEKTDVNTLVGTVVRHPITAGQPLTQGALVHPNDRGFLAAALGPGMRAITVKVSQEQGVAGFVFPGDRVDVVLTQTIE
VEEGSTYPDDQIFTAETIVRNIRVLATDQRYDAEDETGKTPVRTFGSVTLEATPEIAEKIAVAQGMGRLSLALRPLAESA
GELDAAIASGEINVPASGGTAAERKMLAQAAARPVASRSSATTGGDVSRFWIPVRGRVTAPRPQQADNRGGYAPANDGRG
VSAPTGPVVRVTRGDKMTEVPVGGK

Sequences:

>Translated_345_residues
MDTRKIMLIVGALVIAIGAAFGVNYMMRGAGAPAARAAAAPEITGPMILVATRQLPVGTIVGPDSFRFQPWPKDLVENAY
FVKEKTDVNTLVGTVVRHPITAGQPLTQGALVHPNDRGFLAAALGPGMRAITVKVSQEQGVAGFVFPGDRVDVVLTQTIE
VEEGSTYPDDQIFTAETIVRNIRVLATDQRYDAEDETGKTPVRTFGSVTLEATPEIAEKIAVAQGMGRLSLALRPLAESA
GELDAAIASGEINVPASGGTAAERKMLAQAAARPVASRSSATTGGDVSRFWIPVRGRVTAPRPQQADNRGGYAPANDGRG
VSAPTGPVVRVTRGDKMTEVPVGGK
>Mature_345_residues
MDTRKIMLIVGALVIAIGAAFGVNYMMRGAGAPAARAAAAPEITGPMILVATRQLPVGTIVGPDSFRFQPWPKDLVENAY
FVKEKTDVNTLVGTVVRHPITAGQPLTQGALVHPNDRGFLAAALGPGMRAITVKVSQEQGVAGFVFPGDRVDVVLTQTIE
VEEGSTYPDDQIFTAETIVRNIRVLATDQRYDAEDETGKTPVRTFGSVTLEATPEIAEKIAVAQGMGRLSLALRPLAESA
GELDAAIASGEINVPASGGTAAERKMLAQAAARPVASRSSATTGGDVSRFWIPVRGRVTAPRPQQADNRGGYAPANDGRG
VSAPTGPVVRVTRGDKMTEVPVGGK

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36104; Mature: 36104

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRKIMLIVGALVIAIGAAFGVNYMMRGAGAPAARAAAAPEITGPMILVATRQLPVGTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEEEEECCCCCEEE
VGPDSFRFQPWPKDLVENAYFVKEKTDVNTLVGTVVRHPITAGQPLTQGALVHPNDRGFL
ECCCCCCCCCCCHHHHCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEE
AAALGPGMRAITVKVSQEQGVAGFVFPGDRVDVVLTQTIEVEEGSTYPDDQIFTAETIVR
EEECCCCCEEEEEEEECCCCCEEEECCCCCEEEEEEEEEEECCCCCCCCCCEEEHHHHHH
NIRVLATDQRYDAEDETGKTPVRTFGSVTLEATPEIAEKIAVAQGMGRLSLALRPLAESA
CEEEEEECCCCCCCCCCCCCCHHHCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHCC
GELDAAIASGEINVPASGGTAAERKMLAQAAARPVASRSSATTGGDVSRFWIPVRGRVTA
CHHHHEEECCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCEECC
PRPQQADNRGGYAPANDGRGVSAPTGPVVRVTRGDKMTEVPVGGK
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCC
>Mature Secondary Structure
MDTRKIMLIVGALVIAIGAAFGVNYMMRGAGAPAARAAAAPEITGPMILVATRQLPVGTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEEEEECCCCCEEE
VGPDSFRFQPWPKDLVENAYFVKEKTDVNTLVGTVVRHPITAGQPLTQGALVHPNDRGFL
ECCCCCCCCCCCHHHHCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEE
AAALGPGMRAITVKVSQEQGVAGFVFPGDRVDVVLTQTIEVEEGSTYPDDQIFTAETIVR
EEECCCCCEEEEEEEECCCCCEEEECCCCCEEEEEEEEEEECCCCCCCCCCEEEHHHHHH
NIRVLATDQRYDAEDETGKTPVRTFGSVTLEATPEIAEKIAVAQGMGRLSLALRPLAESA
CEEEEEECCCCCCCCCCCCCCHHHCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHCC
GELDAAIASGEINVPASGGTAAERKMLAQAAARPVASRSSATTGGDVSRFWIPVRGRVTA
CHHHHEEECCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCEECC
PRPQQADNRGGYAPANDGRGVSAPTGPVVRVTRGDKMTEVPVGGK
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA