Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is apaG [H]

Identifier: 103486576

GI number: 103486576

Start: 1116378

End: 1116779

Strand: Direct

Name: apaG [H]

Synonym: Sala_1087

Alternate gene names: 103486576

Gene position: 1116378-1116779 (Clockwise)

Preceding gene: 103486575

Following gene: 103486577

Centisome position: 33.37

GC content: 66.92

Gene sequence:

>402_bases
ATGATCGACTCCTTCTTTCCCTTCTCGGCGACCACCGGACCCGTGACGGTGCGCGTGGCGGTGAGCTATCTGCCCGAACA
GTCGCATCCGGCGCTCGGTCGCTGGTTCTGGGCCTATCATGTGCGGGTCGAAAACCATGGCGACAGCGCGGTGCAGCTGC
TCTCGCGCCACTGGCGGATCAGCGACGCGCGCGGGCAGGTGAGCGAGGTCGAGGGCGAGGGTGTGGTTGGCGAACAGCCG
CTGATCGGCGCGGGCGGGGCCTATGACTATGTCTCCGGCTGCCCGCTGCCGACGCCCGAAGGGTCGATGGTCGGCAGCTA
TACGATGGAGATGAGCGACGGATCGCAGATGCTCGTCGCGATCCCGCACTTCCCTCTGGTGGCGCCCGCGACGGCATCAT
GA

Upstream 100 bases:

>100_bases
TGCTGCGTATCAACATCGGGCTCGAAGATCCGCGCGACATCATCGCCGATCTGGACCAGGCATTGACCAGGGTCGGGCTT
TAGGGGAATCTGGCGCCGCG

Downstream 100 bases:

>100_bases
AGCGCACGCACCTGCCCCTCAACGCGCTCCGCGTCTTCGATGCCGCTGCCCGGCATTTGAGTTTCACGCGCGCCGCCGAC
GAGCTGGCGGTGACGCCCGC

Product: ApaG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MIDSFFPFSATTGPVTVRVAVSYLPEQSHPALGRWFWAYHVRVENHGDSAVQLLSRHWRISDARGQVSEVEGEGVVGEQP
LIGAGGAYDYVSGCPLPTPEGSMVGSYTMEMSDGSQMLVAIPHFPLVAPATAS

Sequences:

>Translated_133_residues
MIDSFFPFSATTGPVTVRVAVSYLPEQSHPALGRWFWAYHVRVENHGDSAVQLLSRHWRISDARGQVSEVEGEGVVGEQP
LIGAGGAYDYVSGCPLPTPEGSMVGSYTMEMSDGSQMLVAIPHFPLVAPATAS
>Mature_133_residues
MIDSFFPFSATTGPVTVRVAVSYLPEQSHPALGRWFWAYHVRVENHGDSAVQLLSRHWRISDARGQVSEVEGEGVVGEQP
LIGAGGAYDYVSGCPLPTPEGSMVGSYTMEMSDGSQMLVAIPHFPLVAPATAS

Specific function: Unknown

COG id: COG2967

COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 apaG domain [H]

Homologues:

Organism=Homo sapiens, GI15812188, Length=126, Percent_Identity=42.8571428571429, Blast_Score=91, Evalue=4e-19,
Organism=Homo sapiens, GI15812186, Length=126, Percent_Identity=42.8571428571429, Blast_Score=91, Evalue=4e-19,
Organism=Homo sapiens, GI7661672, Length=117, Percent_Identity=35.8974358974359, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1786235, Length=116, Percent_Identity=43.1034482758621, Blast_Score=95, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21356905, Length=117, Percent_Identity=37.6068376068376, Blast_Score=79, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24644238, Length=117, Percent_Identity=37.6068376068376, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007474
- InterPro:   IPR023065 [H]

Pfam domain/function: PF04379 DUF525 [H]

EC number: NA

Molecular weight: Translated: 14264; Mature: 14264

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS51087 APAG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSFFPFSATTGPVTVRVAVSYLPEQSHPALGRWFWAYHVRVENHGDSAVQLLSRHWRI
CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHCCC
SDARGQVSEVEGEGVVGEQPLIGAGGAYDYVSGCPLPTPEGSMVGSYTMEMSDGSQMLVA
CCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEE
IPHFPLVAPATAS
ECCCCEECCCCCC
>Mature Secondary Structure
MIDSFFPFSATTGPVTVRVAVSYLPEQSHPALGRWFWAYHVRVENHGDSAVQLLSRHWRI
CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHCCC
SDARGQVSEVEGEGVVGEQPLIGAGGAYDYVSGCPLPTPEGSMVGSYTMEMSDGSQMLVA
CCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEE
IPHFPLVAPATAS
ECCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA