| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is ynbE [C]
Identifier: 103486562
GI number: 103486562
Start: 1106538
End: 1106684
Strand: Direct
Name: ynbE [C]
Synonym: Sala_1073
Alternate gene names: 103486562
Gene position: 1106538-1106684 (Clockwise)
Preceding gene: 103486561
Following gene: 103486563
Centisome position: 33.08
GC content: 53.06
Gene sequence:
>147_bases ATGTCGACCCTTGCGGGCTGCGTCCAGATCGACACGCCCGACAAGCCGATCGAAATCAACCTGAATATCAACATCCGTCA GGAAGTGGTGTACAGGCTGGATGGCGATGCCAAGAAGCTCATCGAGCAGAATAGCGAGATATTCTGA
Upstream 100 bases:
>100_bases TTCCCGTTCAGCCCCCAGAAAGCGAGCCTGTGCAATGACATCGACCAAGACCGGAGCAAGGAGGCTGACCGTAACGTCGC GCTGTCTGGTGGTGATGGGG
Downstream 100 bases:
>100_bases TGACAGGAAAGCTTATGATGCGTTTGAAAATGGGAAAGCCGACCGGTTGGGCGCTGGCCGCCGTTGCCGCGACCGCGGCG GTTGCGCTCGCCGTGCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 47
Protein sequence:
>48_residues MSTLAGCVQIDTPDKPIEINLNINIRQEVVYRLDGDAKKLIEQNSEIF
Sequences:
>Translated_48_residues MSTLAGCVQIDTPDKPIEINLNINIRQEVVYRLDGDAKKLIEQNSEIF >Mature_47_residues STLAGCVQIDTPDKPIEINLNINIRQEVVYRLDGDAKKLIEQNSEIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5446; Mature: 5315
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLAGCVQIDTPDKPIEINLNINIRQEVVYRLDGDAKKLIEQNSEIF CCCCCCEEEECCCCCCEEEEEECEEHHHEEEEECCCHHHHHHCCCCCC >Mature Secondary Structure STLAGCVQIDTPDKPIEINLNINIRQEVVYRLDGDAKKLIEQNSEIF CCCCCEEEECCCCCCEEEEEECEEHHHEEEEECCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA