Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486560

Identifier: 103486560

GI number: 103486560

Start: 1103376

End: 1103789

Strand: Direct

Name: 103486560

Synonym: Sala_1071

Alternate gene names: NA

Gene position: 1103376-1103789 (Clockwise)

Preceding gene: 103486558

Following gene: 103486561

Centisome position: 32.98

GC content: 67.15

Gene sequence:

>414_bases
ATGACAGCGGGTGCGGTGGCTGCGCTGGCGGCGGCAACATGGCTGGCGCGCGAGCCGATCGCGGACGAGTTCATTCGCAG
CCAGCTTGAAAGCCGCGCCGTTCCCGCGCAATATCGCATCGACGCGATCGGTTTTCGCAGCGAAAGACTGTCGAACATCG
TGATCGGCGATCCCGCACGCCCCGACCTGACCGCCGCAACGGTCGAGGTGCTGCTCGGCTATGGCCTGGCTGGCCCCTAT
GTGTCGGAGATCCGCGCCGAAGGCGTGCGCCTCCATGGTCGTTTTGTCGATGGCCGCCTGTCGTTCGGGGTGCTCGACAG
GTTCCGCGACCCCGAAAGCACCGACCCCTTTGCCTTGCCCGACATGGCCGTGATCTTGCGCGACGCGCGCGCGCGTCGAG
ACGCCGTGGGGTGA

Upstream 100 bases:

>100_bases
AGCAGGTGCCCGCCTTTTCACGAGCGATGACGTGACGGGGGGTGATTCGTCGACACGGCGTGGATGGCATCGCGGGAAAC
TGCTGTTCAGGAAGCGCTGG

Downstream 100 bases:

>100_bases
TGTCGGTGCGGCGCTGAACGGTTCGGGCAATCTGCGCGACAATTTTGCCGGCAGGCTCGCGCTCGTCGCTCCGGAGCTGT
CTGCGGCGGGATGCAATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTAGAVAALAAATWLAREPIADEFIRSQLESRAVPAQYRIDAIGFRSERLSNIVIGDPARPDLTAATVEVLLGYGLAGPY
VSEIRAEGVRLHGRFVDGRLSFGVLDRFRDPESTDPFALPDMAVILRDARARRDAVG

Sequences:

>Translated_137_residues
MTAGAVAALAAATWLAREPIADEFIRSQLESRAVPAQYRIDAIGFRSERLSNIVIGDPARPDLTAATVEVLLGYGLAGPY
VSEIRAEGVRLHGRFVDGRLSFGVLDRFRDPESTDPFALPDMAVILRDARARRDAVG
>Mature_136_residues
TAGAVAALAAATWLAREPIADEFIRSQLESRAVPAQYRIDAIGFRSERLSNIVIGDPARPDLTAATVEVLLGYGLAGPYV
SEIRAEGVRLHGRFVDGRLSFGVLDRFRDPESTDPFALPDMAVILRDARARRDAVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14851; Mature: 14720

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGAVAALAAATWLAREPIADEFIRSQLESRAVPAQYRIDAIGFRSERLSNIVIGDPAR
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHCEEEECCCCC
PDLTAATVEVLLGYGLAGPYVSEIRAEGVRLHGRFVDGRLSFGVLDRFRDPESTDPFALP
CCHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCC
DMAVILRDARARRDAVG
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TAGAVAALAAATWLAREPIADEFIRSQLESRAVPAQYRIDAIGFRSERLSNIVIGDPAR
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHCEEEECCCCC
PDLTAATVEVLLGYGLAGPYVSEIRAEGVRLHGRFVDGRLSFGVLDRFRDPESTDPFALP
CCHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCC
DMAVILRDARARRDAVG
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA