Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486478

Identifier: 103486478

GI number: 103486478

Start: 1015092

End: 1015778

Strand: Reverse

Name: 103486478

Synonym: Sala_0989

Alternate gene names: NA

Gene position: 1015778-1015092 (Counterclockwise)

Preceding gene: 103486479

Following gene: 103486477

Centisome position: 30.37

GC content: 68.27

Gene sequence:

>687_bases
ATGCCACGCAAGGTCAACCATGTGAGCGCCGAGGACCATCGCATCGTCACCGACGCGGTCGCGGCGGCCGAGCGCCACAC
CGACGGCGAGATCGTCACGATCATCGCCGCGCGGTCGAGCGATTATGACGATGTCGCGCTCGTCTGGGCGAGCGTCGGCG
CCTTCCTCGCCATGTCGCTCGTCGCGCTGTTTCCCGATTTCTATCGCGGGCTTTACGATGCCCTGCGCGGCGGCTGGGGG
CACGAGCCGACCACGAACGAGTGGCTGGGGACGATCATCGCCTTTGGCGTCGTCAAATGGATCGGCATCTGGCTGATCCT
GCTCTGGCGTCCGCTGCGGCTCGCGCTGACACCGCGGTCGATCAAGGCCGCGCGGGCCCGCGCGCGCGCGATCGACCTGT
TCAAGGTCGGCACCGAGGCGAAGACGGCCGGCCGCACCGGCGTCGTCCTCTACGTCAGCCTTGCCGAACATCGCGCCGAC
ATCGTCGCCGACGAAGCGATCGCGTCGAAGGTCGCGCCCGCCATCTGGGGCGACGCGATGGCCGCGCTGATCGAACGCAT
CCGCGCGGGCCAGCCCGGCGAAGGCATGGCGGAAGCGGTGCGACAGGTCGGGGCGGTGCTTGCGACGCATTTCCCGAAGA
GCGACGGCAATCCCAACGAGCTGTGCGACCGGCTGATCGAGATTTGA

Upstream 100 bases:

>100_bases
GTGGCGGCGGTTTCGGCGGTGGCGGCTTCGGCGGCTTTTCGGGCGGCGGCGGCAGCTTCGGCGGCGGCGGCGCGTCGGGC
GGCTGGTAGGAGCACGGGAC

Downstream 100 bases:

>100_bases
CATGACCCGCCCTGCTCCCGACTCGCCCATCGAGACGCGCTGGGAAGGCCGCTTCGTCACGGTCAAGCAGCAGGGAAACT
GGGAATATGTCGCGCGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MPRKVNHVSAEDHRIVTDAVAAAERHTDGEIVTIIAARSSDYDDVALVWASVGAFLAMSLVALFPDFYRGLYDALRGGWG
HEPTTNEWLGTIIAFGVVKWIGIWLILLWRPLRLALTPRSIKAARARARAIDLFKVGTEAKTAGRTGVVLYVSLAEHRAD
IVADEAIASKVAPAIWGDAMAALIERIRAGQPGEGMAEAVRQVGAVLATHFPKSDGNPNELCDRLIEI

Sequences:

>Translated_228_residues
MPRKVNHVSAEDHRIVTDAVAAAERHTDGEIVTIIAARSSDYDDVALVWASVGAFLAMSLVALFPDFYRGLYDALRGGWG
HEPTTNEWLGTIIAFGVVKWIGIWLILLWRPLRLALTPRSIKAARARARAIDLFKVGTEAKTAGRTGVVLYVSLAEHRAD
IVADEAIASKVAPAIWGDAMAALIERIRAGQPGEGMAEAVRQVGAVLATHFPKSDGNPNELCDRLIEI
>Mature_227_residues
PRKVNHVSAEDHRIVTDAVAAAERHTDGEIVTIIAARSSDYDDVALVWASVGAFLAMSLVALFPDFYRGLYDALRGGWGH
EPTTNEWLGTIIAFGVVKWIGIWLILLWRPLRLALTPRSIKAARARARAIDLFKVGTEAKTAGRTGVVLYVSLAEHRADI
VADEAIASKVAPAIWGDAMAALIERIRAGQPGEGMAEAVRQVGAVLATHFPKSDGNPNELCDRLIEI

Specific function: Unknown

COG id: COG3762

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24729; Mature: 24598

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKVNHVSAEDHRIVTDAVAAAERHTDGEIVTIIAARSSDYDDVALVWASVGAFLAMSL
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
VALFPDFYRGLYDALRGGWGHEPTTNEWLGTIIAFGVVKWIGIWLILLWRPLRLALTPRS
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IKAARARARAIDLFKVGTEAKTAGRTGVVLYVSLAEHRADIVADEAIASKVAPAIWGDAM
HHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALIERIRAGQPGEGMAEAVRQVGAVLATHFPKSDGNPNELCDRLIEI
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
PRKVNHVSAEDHRIVTDAVAAAERHTDGEIVTIIAARSSDYDDVALVWASVGAFLAMSL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
VALFPDFYRGLYDALRGGWGHEPTTNEWLGTIIAFGVVKWIGIWLILLWRPLRLALTPRS
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IKAARARARAIDLFKVGTEAKTAGRTGVVLYVSLAEHRADIVADEAIASKVAPAIWGDAM
HHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALIERIRAGQPGEGMAEAVRQVGAVLATHFPKSDGNPNELCDRLIEI
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA