| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is gltP [H]
Identifier: 103486449
GI number: 103486449
Start: 985046
End: 986293
Strand: Reverse
Name: gltP [H]
Synonym: Sala_0959
Alternate gene names: 103486449
Gene position: 986293-985046 (Counterclockwise)
Preceding gene: 103486457
Following gene: 103486448
Centisome position: 29.48
GC content: 68.19
Gene sequence:
>1248_bases TTGAAATCCGCCTGGTTCATCCTTTCGGCGCTCGTCGCCGGCATGTTGCTGGGAATCGGCGTCGACATTGCAGCCCCCGG CGCGGCGACCGCGTCGCTCGCCTTTGTCGAACCGGTGGGCCTCCTGTGGCTCAACGCGCTCAAGATGACGATCGTGCCGC TGGTGGTTGCGCTGCTTATCACCGGTATCACCGCGACCGCCGACGCCGCGCGCGCGGGGCGGCTCGCCAGTCGTGCGGTG ATGACCTTCCTCGCCGCGATCGTGCTGTCGGGGTTGATGTCGCTCGCGCTGACGCCGCTCCTGCTGCGTCTTTTCCCGCT TTCGACCGCCGCGGCGGCGGCGCTGCGCGACGGGCTCGGCGGCGGCGGCGAGACGCCGCCCTCGCCGACCTTTTCGGACT TCATCCTCGGCCTCGTGCCGACCAACCCGATCGCGGCGGCGGCCGAAACCGCGATCCTGCCGCTGATCGTCTTCACCACC GTCTTTGCCTTCGCCATCACCCGCCTCGCCCCCGAACAACGCGCGACGCTGTCGGGGCTGTTCAAGGCGCTTGGCGACGC GATGCTCATCGTCATCGGCTGGGTGCTCGCGCTTGCGCCGCTCGGCGTTTTTGCGCTGGGTTACGCGCTCGCGGTCAAGG CCGGGCTCGCGGCTTTCGGCGGGCTTGTCCATTATGTGCTCATCGTCTCGGGCATCGGCGTCGCCTGCATCATGCTGGCG CTGCTGCTGGCGGTGCTTGTCGTGCGCATTCCCGTCACCCGCTTCGTCCCCGCGATGGTGCCTACTTTGGCAGTGGCGAT CAGCACGCAAAGCTCGCTCGCCAGCCTGCCCGCGATGCTCAAGGCTTCCGAAGAGTTGGGCGTCGCCCCGAAAAAGGCCG ATGTCGTGCTGCCGCTCGCGGTCGCGCTGTTCCGTTTCACCAGCACCGCGATGAACCTCGCCGTGGTCATCTATGTCGCG ACGCTGTTCGGGCTCGAACTGACGCCGTGGGAGATGGCGGCGGGGCTCGCGGTCGCGGTCGGTGCGGCGCTGAGCGCGGT CAGCCTGCCGGGATCGATCAGCTTCGTCACCTCGATCGCGCCGATCGCCACGGCGATGGGCGTCCCCGTCGCGCCGCTGG GACTCCTTGTCGCGGTCGAAACTTTCCCCGATATATTCCGCACCGTCGGCAATGTCGTCGCCGATGTCGCCGCGACGCGC TTCGCCGCCGGCGAAGAAACGCACGCACCCGCAGGAGAAACGCCATGA
Upstream 100 bases:
>100_bases TGTCCAGCCCAAAAACCGGTTCCCGTTTCGTCTGCAAGCTGCTCTAAGTCACGCTCATTTGCTTGGCAAGCTGACCAACG AAGCGCGGGGAGAATCCGTC
Downstream 100 bases:
>100_bases AATATCGCACGCTCGGCCACGGCCTCACCGTTTCCGCGATCGGCATCGGCTGCATGCCGATGATCAAGGGCGGCAATATC CTTTATGGCGAGGCGGCCGA
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MKSAWFILSALVAGMLLGIGVDIAAPGAATASLAFVEPVGLLWLNALKMTIVPLVVALLITGITATADAARAGRLASRAV MTFLAAIVLSGLMSLALTPLLLRLFPLSTAAAAALRDGLGGGGETPPSPTFSDFILGLVPTNPIAAAAETAILPLIVFTT VFAFAITRLAPEQRATLSGLFKALGDAMLIVIGWVLALAPLGVFALGYALAVKAGLAAFGGLVHYVLIVSGIGVACIMLA LLLAVLVVRIPVTRFVPAMVPTLAVAISTQSSLASLPAMLKASEELGVAPKKADVVLPLAVALFRFTSTAMNLAVVIYVA TLFGLELTPWEMAAGLAVAVGAALSAVSLPGSISFVTSIAPIATAMGVPVAPLGLLVAVETFPDIFRTVGNVVADVAATR FAAGEETHAPAGETP
Sequences:
>Translated_415_residues MKSAWFILSALVAGMLLGIGVDIAAPGAATASLAFVEPVGLLWLNALKMTIVPLVVALLITGITATADAARAGRLASRAV MTFLAAIVLSGLMSLALTPLLLRLFPLSTAAAAALRDGLGGGGETPPSPTFSDFILGLVPTNPIAAAAETAILPLIVFTT VFAFAITRLAPEQRATLSGLFKALGDAMLIVIGWVLALAPLGVFALGYALAVKAGLAAFGGLVHYVLIVSGIGVACIMLA LLLAVLVVRIPVTRFVPAMVPTLAVAISTQSSLASLPAMLKASEELGVAPKKADVVLPLAVALFRFTSTAMNLAVVIYVA TLFGLELTPWEMAAGLAVAVGAALSAVSLPGSISFVTSIAPIATAMGVPVAPLGLLVAVETFPDIFRTVGNVVADVAATR FAAGEETHAPAGETP >Mature_415_residues MKSAWFILSALVAGMLLGIGVDIAAPGAATASLAFVEPVGLLWLNALKMTIVPLVVALLITGITATADAARAGRLASRAV MTFLAAIVLSGLMSLALTPLLLRLFPLSTAAAAALRDGLGGGGETPPSPTFSDFILGLVPTNPIAAAAETAILPLIVFTT VFAFAITRLAPEQRATLSGLFKALGDAMLIVIGWVLALAPLGVFALGYALAVKAGLAAFGGLVHYVLIVSGIGVACIMLA LLLAVLVVRIPVTRFVPAMVPTLAVAISTQSSLASLPAMLKASEELGVAPKKADVVLPLAVALFRFTSTAMNLAVVIYVA TLFGLELTPWEMAAGLAVAVGAALSAVSLPGSISFVTSIAPIATAMGVPVAPLGLLVAVETFPDIFRTVGNVVADVAATR FAAGEETHAPAGETP
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=402, Percent_Identity=27.6119402985075, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI5032093, Length=377, Percent_Identity=27.3209549071618, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI223468566, Length=258, Percent_Identity=27.906976744186, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI223468564, Length=248, Percent_Identity=28.2258064516129, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI66773030, Length=253, Percent_Identity=29.6442687747036, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI169790839, Length=248, Percent_Identity=28.2258064516129, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI40254478, Length=435, Percent_Identity=25.2873563218391, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI4827012, Length=250, Percent_Identity=29.2, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI1790514, Length=410, Percent_Identity=26.5853658536585, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1789947, Length=415, Percent_Identity=22.8915662650602, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17537407, Length=418, Percent_Identity=26.0765550239234, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71996953, Length=439, Percent_Identity=27.7904328018223, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193206505, Length=443, Percent_Identity=26.1851015801354, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193206654, Length=422, Percent_Identity=23.2227488151659, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71983099, Length=449, Percent_Identity=24.9443207126949, Blast_Score=68, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71983106, Length=449, Percent_Identity=24.9443207126949, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24583025, Length=432, Percent_Identity=23.1481481481481, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI17137668, Length=432, Percent_Identity=23.1481481481481, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24583023, Length=432, Percent_Identity=23.1481481481481, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 41931; Mature: 41931
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSAWFILSALVAGMLLGIGVDIAAPGAATASLAFVEPVGLLWLNALKMTIVPLVVALLI CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGITATADAARAGRLASRAVMTFLAAIVLSGLMSLALTPLLLRLFPLSTAAAAALRDGLG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GGGETPPSPTFSDFILGLVPTNPIAAAAETAILPLIVFTTVFAFAITRLAPEQRATLSGL CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH FKALGDAMLIVIGWVLALAPLGVFALGYALAVKAGLAAFGGLVHYVLIVSGIGVACIMLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLAVLVVRIPVTRFVPAMVPTLAVAISTQSSLASLPAMLKASEELGVAPKKADVVLPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH VALFRFTSTAMNLAVVIYVATLFGLELTPWEMAAGLAVAVGAALSAVSLPGSISFVTSIA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH PIATAMGVPVAPLGLLVAVETFPDIFRTVGNVVADVAATRFAAGEETHAPAGETP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKSAWFILSALVAGMLLGIGVDIAAPGAATASLAFVEPVGLLWLNALKMTIVPLVVALLI CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGITATADAARAGRLASRAVMTFLAAIVLSGLMSLALTPLLLRLFPLSTAAAAALRDGLG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GGGETPPSPTFSDFILGLVPTNPIAAAAETAILPLIVFTTVFAFAITRLAPEQRATLSGL CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH FKALGDAMLIVIGWVLALAPLGVFALGYALAVKAGLAAFGGLVHYVLIVSGIGVACIMLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLAVLVVRIPVTRFVPAMVPTLAVAISTQSSLASLPAMLKASEELGVAPKKADVVLPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH VALFRFTSTAMNLAVVIYVATLFGLELTPWEMAAGLAVAVGAALSAVSLPGSISFVTSIA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH PIATAMGVPVAPLGLLVAVETFPDIFRTVGNVVADVAATRFAAGEETHAPAGETP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]