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The map label for this gene is intZ [H]

Identifier: 103486337

GI number: 103486337

Start: 854753

End: 855964

Strand: Direct

Name: intZ [H]

Synonym: Sala_0847

Alternate gene names: 103486337

Gene position: 854753-855964 (Clockwise)

Preceding gene: 103486335

Following gene: 103486341

Centisome position: 25.55

GC content: 59.82

Gene sequence:

>1212_bases
ATGGGCAAACTTACGGCGGTGGCGGTCAAGGCCGCTTTGGCGAATCCGGGCACCTATCAGGACGGTGACGGACTTTTCCT
GAAAGTTGGAAAAACTGGTGCGGCTTCCTGGCTTTTGCGACTCCAGCGCGATGGCAAACGACAGGATATTGGTCTGGGTA
GTGCGAAGCTGGTGACGCTGGCGGAAGCGCGTGCGAAGGCTGCTGAACTCCGCAAGGCTGTAAAGGTCGAGAAACGCGAC
GTACTGACGGAGCGGAAGGACGAGGAAGCCGCCAAGGTCACTTTCCGCGAAGCCGCTACCCAATATCATTCCGAGAACGA
AGCTGGCTGGAAAAGCGATGTCTATGGTCGGCAATGGCTGGCCAGTCTGGAAAACTACGCCTTCCCGAAGCTTGGCGACA
TGACGACTGGTGGAATCACTGCCGCCGATATCATCTCGGTCCTCACGCCGATCTGGCAGGAAATCCCCGAAACAGCCCGC
CAGGTTCGGAATCGGATTTGCGCGGTGCTAGATTACTCCCATGCAAAGGGTTGGCGCTCTTCCGAAGCTCCATCAGGCAA
TAGCAGCCTCAAGGCAGGGCGAGGGCTGCCGCGACAGATCAAGAAACCGGCAAACCGCAAGGCGATGCCATACGTGGCCG
TTCCTCCGTTCCTGACCGCGTTGCGCCGCAAACCATCCTATTCGCGTCTGGCGCTAGACCTTCTCATTCTGACGGGCGTT
CGCTCGCAGGAAGTGCGGCTCGCGAAATGGGACGAATTCGATCTGGACCAGCGCCTTTGGACAATCCCAGCCGAACACAT
GAAGCGCAGCAGGGCGCACATCGTGCCGCTTTCAGAAGCGGCCTTGGCGGTGCTTGTGAAGGCGGACGCAATGCGGCTTG
AGGGAGCCGAAGTGGTATTCCCCGGCATGACGGGAAAGGCGATGTCCAACATGACGCTGCTCAAGGTCATGCGCGACATG
CAGGAGCCGTTCCACGTCCACGGTTTCCGCTCCAGCTTCACCGACTGGGCGGCGAACGAAGGCTTCCCCAATGCGGTCGT
CGAAGCGGCACTGGCGCACAAGACGCCTGACGCTGTACAGGCCGCCTATCGCCGCACCACATACCTTGGCACGCCGGATA
ATCCCGGTGCGCGCGTGAAGCTGATGGAAGCGTGGGGGAATTATTGCGCGGGTACTGCCGGAGCAAATACGCCGATCAAT
GAAGGCGGCTAA

Upstream 100 bases:

>100_bases
TCTACAACCGACAGTGAGTGTGGGGAAGGTGTGGGGAAGGAGGTGGGCTTCCCCACACTGCGGCTCTCTTAATTGACCTC
CAGAAATGTGGGGAACGAGA

Downstream 100 bases:

>100_bases
TCTGACGCTGGTCATGCAAACAGCGATTAGCCTTGGTTAGCCCGACAGCCATATTGCTGGGCGAGCATTTTCTTCCCATC
GAGCGCAGCAAGCTCTGTCC

Product: phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MGKLTAVAVKAALANPGTYQDGDGLFLKVGKTGAASWLLRLQRDGKRQDIGLGSAKLVTLAEARAKAAELRKAVKVEKRD
VLTERKDEEAAKVTFREAATQYHSENEAGWKSDVYGRQWLASLENYAFPKLGDMTTGGITAADIISVLTPIWQEIPETAR
QVRNRICAVLDYSHAKGWRSSEAPSGNSSLKAGRGLPRQIKKPANRKAMPYVAVPPFLTALRRKPSYSRLALDLLILTGV
RSQEVRLAKWDEFDLDQRLWTIPAEHMKRSRAHIVPLSEAALAVLVKADAMRLEGAEVVFPGMTGKAMSNMTLLKVMRDM
QEPFHVHGFRSSFTDWAANEGFPNAVVEAALAHKTPDAVQAAYRRTTYLGTPDNPGARVKLMEAWGNYCAGTAGANTPIN
EGG

Sequences:

>Translated_403_residues
MGKLTAVAVKAALANPGTYQDGDGLFLKVGKTGAASWLLRLQRDGKRQDIGLGSAKLVTLAEARAKAAELRKAVKVEKRD
VLTERKDEEAAKVTFREAATQYHSENEAGWKSDVYGRQWLASLENYAFPKLGDMTTGGITAADIISVLTPIWQEIPETAR
QVRNRICAVLDYSHAKGWRSSEAPSGNSSLKAGRGLPRQIKKPANRKAMPYVAVPPFLTALRRKPSYSRLALDLLILTGV
RSQEVRLAKWDEFDLDQRLWTIPAEHMKRSRAHIVPLSEAALAVLVKADAMRLEGAEVVFPGMTGKAMSNMTLLKVMRDM
QEPFHVHGFRSSFTDWAANEGFPNAVVEAALAHKTPDAVQAAYRRTTYLGTPDNPGARVKLMEAWGNYCAGTAGANTPIN
EGG
>Mature_402_residues
GKLTAVAVKAALANPGTYQDGDGLFLKVGKTGAASWLLRLQRDGKRQDIGLGSAKLVTLAEARAKAAELRKAVKVEKRDV
LTERKDEEAAKVTFREAATQYHSENEAGWKSDVYGRQWLASLENYAFPKLGDMTTGGITAADIISVLTPIWQEIPETARQ
VRNRICAVLDYSHAKGWRSSEAPSGNSSLKAGRGLPRQIKKPANRKAMPYVAVPPFLTALRRKPSYSRLALDLLILTGVR
SQEVRLAKWDEFDLDQRLWTIPAEHMKRSRAHIVPLSEAALAVLVKADAMRLEGAEVVFPGMTGKAMSNMTLLKVMRDMQ
EPFHVHGFRSSFTDWAANEGFPNAVVEAALAHKTPDAVQAAYRRTTYLGTPDNPGARVKLMEAWGNYCAGTAGANTPINE
GG

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=381, Percent_Identity=29.9212598425197, Blast_Score=134, Evalue=8e-33,
Organism=Escherichia coli, GI1788974, Length=402, Percent_Identity=29.6019900497512, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1788690, Length=396, Percent_Identity=26.010101010101, Blast_Score=108, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44125; Mature: 43994

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLTAVAVKAALANPGTYQDGDGLFLKVGKTGAASWLLRLQRDGKRQDIGLGSAKLVTL
CCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH
AEARAKAAELRKAVKVEKRDVLTERKDEEAAKVTFREAATQYHSENEAGWKSDVYGRQWL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ASLENYAFPKLGDMTTGGITAADIISVLTPIWQEIPETARQVRNRICAVLDYSHAKGWRS
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC
SEAPSGNSSLKAGRGLPRQIKKPANRKAMPYVAVPPFLTALRRKPSYSRLALDLLILTGV
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECCHHHHHHHCCCCHHHHHHHHHHHHCC
RSQEVRLAKWDEFDLDQRLWTIPAEHMKRSRAHIVPLSEAALAVLVKADAMRLEGAEVVF
CCCCEEEECCCCCCCCHHHHCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHEECCCEEEE
PGMTGKAMSNMTLLKVMRDMQEPFHVHGFRSSFTDWAANEGFPNAVVEAALAHKTPDAVQ
CCCCCHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHH
AAYRRTTYLGTPDNPGARVKLMEAWGNYCAGTAGANTPINEGG
HHHHHHEECCCCCCCCCEEEEHHHHCCHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
GKLTAVAVKAALANPGTYQDGDGLFLKVGKTGAASWLLRLQRDGKRQDIGLGSAKLVTL
CCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH
AEARAKAAELRKAVKVEKRDVLTERKDEEAAKVTFREAATQYHSENEAGWKSDVYGRQWL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ASLENYAFPKLGDMTTGGITAADIISVLTPIWQEIPETARQVRNRICAVLDYSHAKGWRS
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC
SEAPSGNSSLKAGRGLPRQIKKPANRKAMPYVAVPPFLTALRRKPSYSRLALDLLILTGV
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECCHHHHHHHCCCCHHHHHHHHHHHHCC
RSQEVRLAKWDEFDLDQRLWTIPAEHMKRSRAHIVPLSEAALAVLVKADAMRLEGAEVVF
CCCCEEEECCCCCCCCHHHHCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHEECCCEEEE
PGMTGKAMSNMTLLKVMRDMQEPFHVHGFRSSFTDWAANEGFPNAVVEAALAHKTPDAVQ
CCCCCHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHH
AAYRRTTYLGTPDNPGARVKLMEAWGNYCAGTAGANTPINEGG
HHHHHHEECCCCCCCCCEEEEHHHHCCHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]