Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is pstS [H]

Identifier: 103486316

GI number: 103486316

Start: 830073

End: 831134

Strand: Reverse

Name: pstS [H]

Synonym: Sala_0826

Alternate gene names: 103486316

Gene position: 831134-830073 (Counterclockwise)

Preceding gene: 103486317

Following gene: 103486315

Centisome position: 24.85

GC content: 63.94

Gene sequence:

>1062_bases
ATGTTCAAGACATTCGCTCCCAAGATGCTTGGCGTCGCTGGCGCCGCGACGTGCGCGCTGGCGCTTTCCGCGTGCCAGGA
TCAGGCGTCTTCGGGTGGCGGCGCGCGCGATTATATCAGCGCGGTCGGCTCCTCCACCGTCTATCCCTTTGCCACCGCGG
TCGGCGAGAAGTTCGCCGAAGCGACGGGCAACAAGACGCCGAAGATCGATTCGACCGGCACCGGCGGCGGGTTCGAGCGG
TTCTGCGCCGGCGTCGGCGGCGACACGCCCGACATCGCGAACGCATCGCGCCGCATCAAGAAAAAGGAGTTCGACACCTG
CGTCGCCAATGGCGTGAAGGACATCGTCGAAATCCAGATCGGCATCGACGGCATCGCGCTGGGCGAAGCGACACGCGGCC
CCGGTTTCAAGCTGACCGAAGAAGATGTCTATAAGGCGCTCGCCGCCAACCCCTATGGCAAGCCGAACACCGCGAAGACG
TGGAAAGACGTCAACCCCGCGCTGCCCGCGGTCGCGATCTCGGTCTTTGGTCCGCCGTCGACCAGCGGCACCTATGATGC
GTTCAAGGAGCTGATCCTGGGCCGCGGATGCGACGCGAACCCCGAAATGAAGGCGCTGAAGGCCAGCAACGCCGACGAAC
ATGAAGCGACCTGCACCACGCTGCGCGGTTCGCCCTATTATGTCGAGCAGGGCGAGAATGATAACCTCATCATCTCGAAG
CTCGACAAGAACCCGACCAGCCTTGGCATCTTCGGCTTTTCCTATCTCGATGCGAACAAGGACAAGATCAAGGCGGTGCC
GATCCAGGGCGTCGCGCCCACTTACGCGGCGATCGCCGATGGCAGCTACCCCGGTTCGCGCCCGCTGTTCATCTATGTGA
AGAAGGCGCATGTCGGCGTTGTCCCCGGCCTCGCCGAATATGTCGCCGAGTTCCTGAAGGGCGCGGCCGACGGCGGGTAT
CTGAACGCCAAGGGGCTGATCGTGTCGCCCAAGGCCATCGCCGACAAGGCGCGCGCCGCGGGCACCGCGATGACCCCGCT
GGATGGCAGCGAGCTGAAATAA

Upstream 100 bases:

>100_bases
CCTGTCACAAACACGTCACACAAAACCCCCATTGGGCGCTCAGCGAGTCGCCGCGGGGGTGGCGGCTTGGTTCGGTAACG
ACCCCCGACAGGACTTTTTC

Downstream 100 bases:

>100_bases
GGTTGCTCATGCAGGCGGCCGGGGCGGGTCTGTCCGGTCCGGCCGCCGGTTTTACTCTTTCCCTCCCTTCTCCCGTTCGG
GACCATTCAATCCCGCTCGC

Product: phosphate binding protein, putative

Products: NA

Alternate protein names: PBP [H]

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MFKTFAPKMLGVAGAATCALALSACQDQASSGGGARDYISAVGSSTVYPFATAVGEKFAEATGNKTPKIDSTGTGGGFER
FCAGVGGDTPDIANASRRIKKKEFDTCVANGVKDIVEIQIGIDGIALGEATRGPGFKLTEEDVYKALAANPYGKPNTAKT
WKDVNPALPAVAISVFGPPSTSGTYDAFKELILGRGCDANPEMKALKASNADEHEATCTTLRGSPYYVEQGENDNLIISK
LDKNPTSLGIFGFSYLDANKDKIKAVPIQGVAPTYAAIADGSYPGSRPLFIYVKKAHVGVVPGLAEYVAEFLKGAADGGY
LNAKGLIVSPKAIADKARAAGTAMTPLDGSELK

Sequences:

>Translated_353_residues
MFKTFAPKMLGVAGAATCALALSACQDQASSGGGARDYISAVGSSTVYPFATAVGEKFAEATGNKTPKIDSTGTGGGFER
FCAGVGGDTPDIANASRRIKKKEFDTCVANGVKDIVEIQIGIDGIALGEATRGPGFKLTEEDVYKALAANPYGKPNTAKT
WKDVNPALPAVAISVFGPPSTSGTYDAFKELILGRGCDANPEMKALKASNADEHEATCTTLRGSPYYVEQGENDNLIISK
LDKNPTSLGIFGFSYLDANKDKIKAVPIQGVAPTYAAIADGSYPGSRPLFIYVKKAHVGVVPGLAEYVAEFLKGAADGGY
LNAKGLIVSPKAIADKARAAGTAMTPLDGSELK
>Mature_353_residues
MFKTFAPKMLGVAGAATCALALSACQDQASSGGGARDYISAVGSSTVYPFATAVGEKFAEATGNKTPKIDSTGTGGGFER
FCAGVGGDTPDIANASRRIKKKEFDTCVANGVKDIVEIQIGIDGIALGEATRGPGFKLTEEDVYKALAANPYGKPNTAKT
WKDVNPALPAVAISVFGPPSTSGTYDAFKELILGRGCDANPEMKALKASNADEHEATCTTLRGSPYYVEQGENDNLIISK
LDKNPTSLGIFGFSYLDANKDKIKAVPIQGVAPTYAAIADGSYPGSRPLFIYVKKAHVGVVPGLAEYVAEFLKGAADGGY
LNAKGLIVSPKAIADKARAAGTAMTPLDGSELK

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36568; Mature: 36568

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKTFAPKMLGVAGAATCALALSACQDQASSGGGARDYISAVGSSTVYPFATAVGEKFAE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
ATGNKTPKIDSTGTGGGFERFCAGVGGDTPDIANASRRIKKKEFDTCVANGVKDIVEIQI
HCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
GIDGIALGEATRGPGFKLTEEDVYKALAANPYGKPNTAKTWKDVNPALPAVAISVFGPPS
CCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
TSGTYDAFKELILGRGCDANPEMKALKASNADEHEATCTTLRGSPYYVEQGENDNLIISK
CCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCEEEEE
LDKNPTSLGIFGFSYLDANKDKIKAVPIQGVAPTYAAIADGSYPGSRPLFIYVKKAHVGV
CCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCHHHEECCCCCCCCCEEEEEEECCCCC
VPGLAEYVAEFLKGAADGGYLNAKGLIVSPKAIADKARAAGTAMTPLDGSELK
CCCHHHHHHHHHHCCCCCCEEECCCEEECCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MFKTFAPKMLGVAGAATCALALSACQDQASSGGGARDYISAVGSSTVYPFATAVGEKFAE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
ATGNKTPKIDSTGTGGGFERFCAGVGGDTPDIANASRRIKKKEFDTCVANGVKDIVEIQI
HCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
GIDGIALGEATRGPGFKLTEEDVYKALAANPYGKPNTAKTWKDVNPALPAVAISVFGPPS
CCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
TSGTYDAFKELILGRGCDANPEMKALKASNADEHEATCTTLRGSPYYVEQGENDNLIISK
CCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCEEEEE
LDKNPTSLGIFGFSYLDANKDKIKAVPIQGVAPTYAAIADGSYPGSRPLFIYVKKAHVGV
CCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCHHHEECCCCCCCCCEEEEEEECCCCC
VPGLAEYVAEFLKGAADGGYLNAKGLIVSPKAIADKARAAGTAMTPLDGSELK
CCCHHHHHHHHHHCCCCCCEEECCCEEECCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA