The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486295

Identifier: 103486295

GI number: 103486295

Start: 809791

End: 810300

Strand: Reverse

Name: 103486295

Synonym: Sala_0803

Alternate gene names: NA

Gene position: 810300-809791 (Counterclockwise)

Preceding gene: 103486297

Following gene: 103486285

Centisome position: 24.22

GC content: 60.59

Gene sequence:

>510_bases
ATGGTCTTCATCGACGAGACCTGGGCCAAGACCAACATGACCCGTACCCATGGCTGGGGCACGAAGGGCGAGCCGCTGAT
CGACAAGGTGCCGCATGGACACTGGAAGACGCTCACCTTTATCGCTGGTCTCAGGCACGACGGGATCGTCGCCCCCTGCG
TGCTCGACGGGCCGATCAACGGGACAAGCTTCACCGCCCGGGTCGAGCAGTTCCTGATCCCCGAACTGGAACCAGGCAGC
ATCGTCGTCCTCGACAATCTCGGCAGCCACAAAGGCAGCCGCGTGCGCAAACTGCTCCGGGCGGCGGGCATCAAGATGTT
CTTCCTGCCACCTTACTCGCCCGACCTCGATCCGATCGAGAAGATGTTCTCCAAACTCAAGCGCCTGCTGCGAAAAGCCA
ACGAACGAACCGTCGAGCCCACTTGGCGGCGCATCGGCAAACTGCTCGACCGCTTCCCTCCAAACGAATGTGCCAACTAC
ATCAGAGACGCCGGATATGCCTCAATCTAA

Upstream 100 bases:

>100_bases
TTTAAAAAAGACGCTCTTCGCCAAGGAGCAAGACCGCCCCGATGTTGTCCGCCGCCGCGCCCGCTGGCGCTGGGTTCAGC
GCTGGGTAAACCCCCGGCGC

Downstream 100 bases:

>100_bases
CTCAGAAAGACTCTAGCCGCAGTTGAGAGGGGGTTGGGATGGTCCCCCTCTCCCAACCCTCTCCCCTGAAGGGGAGACGG
CTATGGCAGCTCCCCACCCC

Product: putative ISRm2011-2 transposase protein

Products: NA

Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; Transposase Family Protein; Transposase IS; ISRin2 Transposase OrfB; ISSoc4 Transposase OrfAB; Transposase And Inactivated Derivative; Transposase Fragment

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MVFIDETWAKTNMTRTHGWGTKGEPLIDKVPHGHWKTLTFIAGLRHDGIVAPCVLDGPINGTSFTARVEQFLIPELEPGS
IVVLDNLGSHKGSRVRKLLRAAGIKMFFLPPYSPDLDPIEKMFSKLKRLLRKANERTVEPTWRRIGKLLDRFPPNECANY
IRDAGYASI

Sequences:

>Translated_169_residues
MVFIDETWAKTNMTRTHGWGTKGEPLIDKVPHGHWKTLTFIAGLRHDGIVAPCVLDGPINGTSFTARVEQFLIPELEPGS
IVVLDNLGSHKGSRVRKLLRAAGIKMFFLPPYSPDLDPIEKMFSKLKRLLRKANERTVEPTWRRIGKLLDRFPPNECANY
IRDAGYASI
>Mature_169_residues
MVFIDETWAKTNMTRTHGWGTKGEPLIDKVPHGHWKTLTFIAGLRHDGIVAPCVLDGPINGTSFTARVEQFLIPELEPGS
IVVLDNLGSHKGSRVRKLLRAAGIKMFFLPPYSPDLDPIEKMFSKLKRLLRKANERTVEPTWRRIGKLLDRFPPNECANY
IRDAGYASI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19093; Mature: 19093

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFIDETWAKTNMTRTHGWGTKGEPLIDKVPHGHWKTLTFIAGLRHDGIVAPCVLDGPIN
CEEECCCHHHCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCEEECEEECCCCC
GTSFTARVEQFLIPELEPGSIVVLDNLGSHKGSRVRKLLRAAGIKMFFLPPYSPDLDPIE
CCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHH
KMFSKLKRLLRKANERTVEPTWRRIGKLLDRFPPNECANYIRDAGYASI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVFIDETWAKTNMTRTHGWGTKGEPLIDKVPHGHWKTLTFIAGLRHDGIVAPCVLDGPIN
CEEECCCHHHCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCEEECEEECCCCC
GTSFTARVEQFLIPELEPGSIVVLDNLGSHKGSRVRKLLRAAGIKMFFLPPYSPDLDPIE
CCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHH
KMFSKLKRLLRKANERTVEPTWRRIGKLLDRFPPNECANYIRDAGYASI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA