| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is caiD [C]
Identifier: 103486228
GI number: 103486228
Start: 740966
End: 741661
Strand: Direct
Name: caiD [C]
Synonym: Sala_0736
Alternate gene names: 103486228
Gene position: 740966-741661 (Clockwise)
Preceding gene: 103486223
Following gene: 103486231
Centisome position: 22.15
GC content: 58.76
Gene sequence:
>696_bases ATGACAGGCGCAGTAAGCTACTTTCACGAGAATGGCGTTGCCACGATCACGATCGATGACGGCAAGGTGAATGTCATGAC GACAGACTTGCTGGATGAACTGTGCCGTTCAATCACCCAGGCCAGGGACGATCGGTCGATGATCCTGCTCCGGTCAGGTC GGGAGAAGATCTTCTCCGCAGGCTTCGACGTCAAGCCACTGACCAGCCGGGATGCAGAGGCAAGTCGCGCTCTTCTGCAA GCAGGGATCAATGCGATCCTTGCACTTCTGGAGTATCCCTATCCGGTAGTCAGCCTTTGTGCAGGACATGCTTACCCCAT GGGGGCATTTCTGCTGCTCGCCTCGGACGCACGGATCGGAGTTCATGGGGAATATCGGGTCGGGATGAATGAGGTGGCGA TCGGTATCGCCGTGCCCGATTTCGCCTTGCATCTTGCTGGATATCGTGTGGCCCCGACGTGGCTTCACCGAGTGGTCGCG CTTGGTCGCATGCTGAATCCCCAAGAGGCGGTCGAAGCCGGTTTCCTCGATATGCTGGTGCCTCCGGAACGGGTCGAAAC GGCACTGGACCAAACCATTGGGCACCTCGCGGGCCTGAATATGGCGGCACATGCGTCAACAAAGAACCGGATGCGGGCCA ATGTTGCCGAAGCAATCAGAACGGCCGGCCGCGATCGGCTGTTGCCGACCGGTTGA
Upstream 100 bases:
>100_bases ACCCTCAACCCGGCATCCGTCAAGCCTCGGGTTCCAAAAATTATATTGACTGGTCTATTTAATAGTCTCAGGAAGACAGC CTCTCGAAGGAGTGGATTCG
Downstream 100 bases:
>100_bases GCCCGTCCGGGGCCGCCGCCGGTGGGGCTCCCGGTCGTCCTTCGGGTCGCCGGTGGCCCCGGACACCCATCGAGATGCAA GGGGTAACCATGACAAATCT
Product: enoyl-CoA hydratase
Products: trans-2-enoyl-CoA; trans-3-enoyl-CoA; H2O
Alternate protein names: Enoyl-CoA Hydratase/Isomerase; Enoyl-CoA Hydratase/Isomerase Family Protein; Enoyl-CoA Hydratase/Carnithine Racemase; 2-Ketocyclohexanecarboxyl-CoA Hydrolase; Short Chain Enoyl-CoA Hydratase; 3-Hydroxybutyryl-CoA Dehydratase; Enoyl CoA Hydratase
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTGAVSYFHENGVATITIDDGKVNVMTTDLLDELCRSITQARDDRSMILLRSGREKIFSAGFDVKPLTSRDAEASRALLQ AGINAILALLEYPYPVVSLCAGHAYPMGAFLLLASDARIGVHGEYRVGMNEVAIGIAVPDFALHLAGYRVAPTWLHRVVA LGRMLNPQEAVEAGFLDMLVPPERVETALDQTIGHLAGLNMAAHASTKNRMRANVAEAIRTAGRDRLLPTG
Sequences:
>Translated_231_residues MTGAVSYFHENGVATITIDDGKVNVMTTDLLDELCRSITQARDDRSMILLRSGREKIFSAGFDVKPLTSRDAEASRALLQ AGINAILALLEYPYPVVSLCAGHAYPMGAFLLLASDARIGVHGEYRVGMNEVAIGIAVPDFALHLAGYRVAPTWLHRVVA LGRMLNPQEAVEAGFLDMLVPPERVETALDQTIGHLAGLNMAAHASTKNRMRANVAEAIRTAGRDRLLPTG >Mature_230_residues TGAVSYFHENGVATITIDDGKVNVMTTDLLDELCRSITQARDDRSMILLRSGREKIFSAGFDVKPLTSRDAEASRALLQA GINAILALLEYPYPVVSLCAGHAYPMGAFLLLASDARIGVHGEYRVGMNEVAIGIAVPDFALHLAGYRVAPTWLHRVVAL GRMLNPQEAVEAGFLDMLVPPERVETALDQTIGHLAGLNMAAHASTKNRMRANVAEAIRTAGRDRLLPTG
Specific function: Catalyzes The Reversible Dehydration Of L-Carnitinyl-CoA To Crotobetainyl-CoA. [C]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI62530384, Length=217, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI19921018, Length=219, Percent_Identity=30.1369863013699, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24583165, Length=226, Percent_Identity=27.4336283185841, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI45550169, Length=213, Percent_Identity=27.2300469483568, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.17
Molecular weight: Translated: 24921; Mature: 24790
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGAVSYFHENGVATITIDDGKVNVMTTDLLDELCRSITQARDDRSMILLRSGREKIFSA CCCCHHEEECCCEEEEEECCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHC GFDVKPLTSRDAEASRALLQAGINAILALLEYPYPVVSLCAGHAYPMGAFLLLASDARIG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHEEEEEECCCCCC VHGEYRVGMNEVAIGIAVPDFALHLAGYRVAPTWLHRVVALGRMLNPQEAVEAGFLDMLV CCCCEEECHHHEEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCHHHHCC PPERVETALDQTIGHLAGLNMAAHASTKNRMRANVAEAIRTAGRDRLLPTG CHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TGAVSYFHENGVATITIDDGKVNVMTTDLLDELCRSITQARDDRSMILLRSGREKIFSA CCCHHEEECCCEEEEEECCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHC GFDVKPLTSRDAEASRALLQAGINAILALLEYPYPVVSLCAGHAYPMGAFLLLASDARIG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHEEEEEECCCCCC VHGEYRVGMNEVAIGIAVPDFALHLAGYRVAPTWLHRVVALGRMLNPQEAVEAGFLDMLV CCCCEEECHHHEEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCHHHHCC PPERVETALDQTIGHLAGLNMAAHASTKNRMRANVAEAIRTAGRDRLLPTG CHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (3S)-3-hydroxyacyl-CoA
Specific reaction: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA