Click here to switch to the map view.

The map label for this gene is dksA [H]

Identifier: 103486217

GI number: 103486217

Start: 731379

End: 731840

Strand: Direct

Name: dksA [H]

Synonym: Sala_0724

Alternate gene names: 103486217

Gene position: 731379-731840 (Clockwise)

Preceding gene: 103486212

Following gene: 103486218

Centisome position: 21.86

GC content: 62.99

Gene sequence:

>462_bases
ATGCCGACCAAGATTGCCGATGTTGGCGCTGACGCGCTTCGCGAAGCCAAATCCAATCTCGATTCGGACTATGTCCCGAG
CGACGACGAAGAGTTTATGAACGAGCGGCAGCAGGAATATTTCCGTGGCCTGCTCATCGCATGGAAAAAGTCGATTCTCA
GCGAAGCCGAATCGACGCTGGCGCATTTGCAGGACGGTCCGCTGCGCGAGCCCGACCTTGCCGACCGCGCGTCGAGCGAG
ACCGACTGGGCGATCGAACTTCGCACCCGCGACCGCCAGCGCAAGCTGATCGCCAAGATCGACGCGGCGATCCGCCGTAT
CGACGAGGGCGAATATGGCTATTGCGCGGTGACCGGCGAACCGATCTCGCTGGCGCGGCTGCAGGCGCGGCCGATCGCGA
CGATGACGCTGGAGGCGCAGGAGCGCCACGAGCGCAACGAACGCATTTCGCGCGAGGATTGA

Upstream 100 bases:

>100_bases
TTCGGTGCTTGTATCGTGGCAAGCGGCTGGTTATAGGCGCGCCACTCCCCGAGCCGCTTTGGCGGCGCGCCGGTGACAGG
AAAGGACGCGAGAGCCCCTC

Downstream 100 bases:

>100_bases
TCGCGCGCATCCGCGCCGCCCATTTACGTTTCAGCAACTGCGCTACCCTAGATTCCGTGCCGCAACGACACGGAAATGGG
GCGCAGCCATGGATTCGCAA

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MPTKIADVGADALREAKSNLDSDYVPSDDEEFMNERQQEYFRGLLIAWKKSILSEAESTLAHLQDGPLREPDLADRASSE
TDWAIELRTRDRQRKLIAKIDAAIRRIDEGEYGYCAVTGEPISLARLQARPIATMTLEAQERHERNERISRED

Sequences:

>Translated_153_residues
MPTKIADVGADALREAKSNLDSDYVPSDDEEFMNERQQEYFRGLLIAWKKSILSEAESTLAHLQDGPLREPDLADRASSE
TDWAIELRTRDRQRKLIAKIDAAIRRIDEGEYGYCAVTGEPISLARLQARPIATMTLEAQERHERNERISRED
>Mature_152_residues
PTKIADVGADALREAKSNLDSDYVPSDDEEFMNERQQEYFRGLLIAWKKSILSEAESTLAHLQDGPLREPDLADRASSET
DWAIELRTRDRQRKLIAKIDAAIRRIDEGEYGYCAVTGEPISLARLQARPIATMTLEAQERHERNERISRED

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=117, Percent_Identity=39.3162393162393, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 17489; Mature: 17357

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTKIADVGADALREAKSNLDSDYVPSDDEEFMNERQQEYFRGLLIAWKKSILSEAESTL
CCCCHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHLQDGPLREPDLADRASSETDWAIELRTRDRQRKLIAKIDAAIRRIDEGEYGYCAVTGE
HHHCCCCCCCCCCHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
PISLARLQARPIATMTLEAQERHERNERISRED
CHHHHHHCCCCCCEEEECHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PTKIADVGADALREAKSNLDSDYVPSDDEEFMNERQQEYFRGLLIAWKKSILSEAESTL
CCCHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHLQDGPLREPDLADRASSETDWAIELRTRDRQRKLIAKIDAAIRRIDEGEYGYCAVTGE
HHHCCCCCCCCCCHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
PISLARLQARPIATMTLEAQERHERNERISRED
CHHHHHHCCCCCCEEEECHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9555902 [H]