| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is argC [H]
Identifier: 103486204
GI number: 103486204
Start: 715661
End: 716596
Strand: Reverse
Name: argC [H]
Synonym: Sala_0711
Alternate gene names: 103486204
Gene position: 716596-715661 (Counterclockwise)
Preceding gene: 103486205
Following gene: 103486202
Centisome position: 21.42
GC content: 68.48
Gene sequence:
>936_bases ATGGTCCAGAGCATCTTCATCGACGGCGCCGCGGGGACGACGGGCCTTGAAATTGCCGAGCGGCTCGCAGGGCGACGTGA ATTCGCGCTGATCGCGCTCGACGCGGCCCGCCGCAAGGATGCCGCGGCGCGGCGCGAAGCCCTGAACGACGCCGATTTCG TGATCCTCTGCCTGCCCGACGATGCGGCGCGCGAGGCGGTGGCGATGATCGACAACGACCGGACCCGCGTGATCGACGCT TCGACCGCGCACCGCGTCGCGCCGGGCTGGACCTATGGTTTTCCCGAAGTCGTCGGGCATGATGCGGTGGCTGCGGCGGC ACGCGTGTCAAACCCCGGCTGCTATTCGACCGGGTTCATCGCGCTCGTCGCGCCGCTGGTGCGCGCAGGCCTTCTGCCCG CCGACTGGCCCTATATCTGCCACGCGGTCAGCGGCTATTCGGGCGGCGGCAAGGCGCTGATCGAACGCTTTGAGGGTGAC CGCGACATCGCCTGGCGCGGCTATGCGCTTGCCCTCGGTCACAAGCATGTGCCCGAAATGCAGATGCACTGCGGCCTGTC GGTTGCGCCGCTCTTTTCGCCCGCGGTGATCCCGGCGCATCGCGGGATGGTGGTCGAAGTGCCGCTGCCGCTCGGTGCCA TGCCCCGCGCCGCCGCACCCGATGCGCTGCGCGCCGCGCTCGCCGACTTTTACGGCGCGAGCCCAATCGTCGCCATGGGC GATATGCCTGCGGACGGCGAAATGCTGCTGCGCGCGTCGGATGCGCGGGATGACCGCATCGAACTATTCGTCTTCTCCAA TGCTGACGCCGACCAGGCGCGGCTCGTCGCGCGGCTCGACAATCTGGGCAAGGGCGCCAGCGGCGCGTGCGTCCAGAACC TCAATATCATGGCCGGATTGCCCGAAACCGCGGGGCTGCGGATTCAGGCTCAGTGA
Upstream 100 bases:
>100_bases GGAACGAGGTGCGCGCCGAACCGCTTGCCGACCTGATCGCTCGGACGAGAGCCGAGGGGCACGAGGAGCCGGTGAGCGGC GCAAAGCGGCTTCACTAGCC
Downstream 100 bases:
>100_bases ACTGTGTCGAGGACGTCGTCGACCGACAGATAGGTGATCAGCCGCTCGATCTGCCGCCAGCGCGCGAAATGGACATGGTT GCCCAACGCCCGATATTGTT
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase [H]
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MVQSIFIDGAAGTTGLEIAERLAGRREFALIALDAARRKDAAARREALNDADFVILCLPDDAAREAVAMIDNDRTRVIDA STAHRVAPGWTYGFPEVVGHDAVAAAARVSNPGCYSTGFIALVAPLVRAGLLPADWPYICHAVSGYSGGGKALIERFEGD RDIAWRGYALALGHKHVPEMQMHCGLSVAPLFSPAVIPAHRGMVVEVPLPLGAMPRAAAPDALRAALADFYGASPIVAMG DMPADGEMLLRASDARDDRIELFVFSNADADQARLVARLDNLGKGASGACVQNLNIMAGLPETAGLRIQAQ
Sequences:
>Translated_311_residues MVQSIFIDGAAGTTGLEIAERLAGRREFALIALDAARRKDAAARREALNDADFVILCLPDDAAREAVAMIDNDRTRVIDA STAHRVAPGWTYGFPEVVGHDAVAAAARVSNPGCYSTGFIALVAPLVRAGLLPADWPYICHAVSGYSGGGKALIERFEGD RDIAWRGYALALGHKHVPEMQMHCGLSVAPLFSPAVIPAHRGMVVEVPLPLGAMPRAAAPDALRAALADFYGASPIVAMG DMPADGEMLLRASDARDDRIELFVFSNADADQARLVARLDNLGKGASGACVQNLNIMAGLPETAGLRIQAQ >Mature_311_residues MVQSIFIDGAAGTTGLEIAERLAGRREFALIALDAARRKDAAARREALNDADFVILCLPDDAAREAVAMIDNDRTRVIDA STAHRVAPGWTYGFPEVVGHDAVAAAARVSNPGCYSTGFIALVAPLVRAGLLPADWPYICHAVSGYSGGGKALIERFEGD RDIAWRGYALALGHKHVPEMQMHCGLSVAPLFSPAVIPAHRGMVVEVPLPLGAMPRAAAPDALRAALADFYGASPIVAMG DMPADGEMLLRASDARDDRIELFVFSNADADQARLVARLDNLGKGASGACVQNLNIMAGLPETAGLRIQAQ
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 2 subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320913, Length=275, Percent_Identity=30.1818181818182, Blast_Score=86, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010136 - InterPro: IPR016040 - InterPro: IPR000534 [H]
Pfam domain/function: PF01118 Semialdhyde_dh [H]
EC number: =1.2.1.38 [H]
Molecular weight: Translated: 32806; Mature: 32806
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00285 POTATO_INHIBITOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQSIFIDGAAGTTGLEIAERLAGRREFALIALDAARRKDAAARREALNDADFVILCLPD CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCC DAAREAVAMIDNDRTRVIDASTAHRVAPGWTYGFPEVVGHDAVAAAARVSNPGCYSTGFI HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCHHH ALVAPLVRAGLLPADWPYICHAVSGYSGGGKALIERFEGDRDIAWRGYALALGHKHVPEM HHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCEEEEECCCCCCCH QMHCGLSVAPLFSPAVIPAHRGMVVEVPLPLGAMPRAAAPDALRAALADFYGASPIVAMG HHHCCCEEHHCCCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEC DMPADGEMLLRASDARDDRIELFVFSNADADQARLVARLDNLGKGASGACVQNLNIMAGL CCCCCCCEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEECC PETAGLRIQAQ CCCCCEEEEEC >Mature Secondary Structure MVQSIFIDGAAGTTGLEIAERLAGRREFALIALDAARRKDAAARREALNDADFVILCLPD CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCC DAAREAVAMIDNDRTRVIDASTAHRVAPGWTYGFPEVVGHDAVAAAARVSNPGCYSTGFI HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCHHH ALVAPLVRAGLLPADWPYICHAVSGYSGGGKALIERFEGDRDIAWRGYALALGHKHVPEM HHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCEEEEECCCCCCCH QMHCGLSVAPLFSPAVIPAHRGMVVEVPLPLGAMPRAAAPDALRAALADFYGASPIVAMG HHHCCCEEHHCCCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEC DMPADGEMLLRASDARDDRIELFVFSNADADQARLVARLDNLGKGASGACVQNLNIMAGL CCCCCCCEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEECC PETAGLRIQAQ CCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA