| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486195
Identifier: 103486195
GI number: 103486195
Start: 708439
End: 708897
Strand: Reverse
Name: 103486195
Synonym: Sala_0702
Alternate gene names: NA
Gene position: 708897-708439 (Counterclockwise)
Preceding gene: 103486196
Following gene: 103486194
Centisome position: 21.19
GC content: 66.88
Gene sequence:
>459_bases ATGAAAAAATTCGCAGTTGCAGCCGCTCTCCTCTCGGCCGCCCTCGCCTCCCCCGCCCTTGCGGCCCCCGGCGGCGAAGG CCGCGTGGAAGTTCGCGGCGGCCTGATCACCGGCAATGGCCAGGACGAAGCCACGCTCGGCGCCGCCGCCGGTTATGACT TCGACCTCGGCAGCTCGACCTTCCTCGGCGCCGAAATCGCGGGCGACAAGGTGCTCGTCGACGGCGCGAACGTCCAGTTC TCGGCCGGCGCGCGCGCCGGTGCCAAGATCGGCGCCAACGGCAAGCTCTACGCCACCGGCGGCTACACCTTCGGCGACAT CGACGATCCCTATGTCGGCGCAGGCTACCAGCACAAGCTGGGCCAGAACCTGTACGCCAAGGGGGAGTATCGCCACCAGT TCATCGAGAACTTCGGCGACTTCGACAGCTTCGTCGTCGGCGTCGGTTTCGCTTTCTGA
Upstream 100 bases:
>100_bases TCTGAACGATCCGTTCATTGACGCGACAGGCGCCGACGCCATTTAGGGGCCGGGCCGCGACCCAAAGGGCGTGGTCCTGT CAAGAATGAAGGAACGAAAA
Downstream 100 bases:
>100_bases TCCGTTCGGAAAGCGCCCGACACAGGAAGGGGCGGCCCGCGGGTCGCCCCTTTTCATTTGCGCAGCGCCGGGGCACGGTG CCGCGCATGACGGCTTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKKFAVAAALLSAALASPALAAPGGEGRVEVRGGLITGNGQDEATLGAAAGYDFDLGSSTFLGAEIAGDKVLVDGANVQF SAGARAGAKIGANGKLYATGGYTFGDIDDPYVGAGYQHKLGQNLYAKGEYRHQFIENFGDFDSFVVGVGFAF
Sequences:
>Translated_152_residues MKKFAVAAALLSAALASPALAAPGGEGRVEVRGGLITGNGQDEATLGAAAGYDFDLGSSTFLGAEIAGDKVLVDGANVQF SAGARAGAKIGANGKLYATGGYTFGDIDDPYVGAGYQHKLGQNLYAKGEYRHQFIENFGDFDSFVVGVGFAF >Mature_152_residues MKKFAVAAALLSAALASPALAAPGGEGRVEVRGGLITGNGQDEATLGAAAGYDFDLGSSTFLGAEIAGDKVLVDGANVQF SAGARAGAKIGANGKLYATGGYTFGDIDDPYVGAGYQHKLGQNLYAKGEYRHQFIENFGDFDSFVVGVGFAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15466; Mature: 15466
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFAVAAALLSAALASPALAAPGGEGRVEVRGGLITGNGQDEATLGAAAGYDFDLGSST CCHHHHHHHHHHHHHCCCCEECCCCCCEEEEECEEEECCCCCCCEEEECCCCCCCCCCCE FLGAEIAGDKVLVDGANVQFSAGARAGAKIGANGKLYATGGYTFGDIDDPYVGAGYQHKL EEEEEECCCEEEEECCCEEEECCCCCCCEECCCCEEEEECCEEECCCCCCCCCCCCHHHC GQNLYAKGEYRHQFIENFGDFDSFVVGVGFAF CCCCCCCCHHHHHHHHHCCCHHHHHHEEEECC >Mature Secondary Structure MKKFAVAAALLSAALASPALAAPGGEGRVEVRGGLITGNGQDEATLGAAAGYDFDLGSST CCHHHHHHHHHHHHHCCCCEECCCCCCEEEEECEEEECCCCCCCEEEECCCCCCCCCCCE FLGAEIAGDKVLVDGANVQFSAGARAGAKIGANGKLYATGGYTFGDIDDPYVGAGYQHKL EEEEEECCCEEEEECCCEEEECCCCCCCEECCCCEEEEECCEEECCCCCCCCCCCCHHHC GQNLYAKGEYRHQFIENFGDFDSFVVGVGFAF CCCCCCCCHHHHHHHHHCCCHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA