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The map label for this gene is ynfA [C]

Identifier: 103486194

GI number: 103486194

Start: 708029

End: 708352

Strand: Reverse

Name: ynfA [C]

Synonym: Sala_0701

Alternate gene names: 103486194

Gene position: 708352-708029 (Counterclockwise)

Preceding gene: 103486195

Following gene: 103486192

Centisome position: 21.18

GC content: 67.59

Gene sequence:

>324_bases
ATGACGGCTTTTGCATATATCGGCGCGGCGCTGGCGGAGATCGCGGGCTGCTTCGCCTTCTGGGCGTGGCTCAGGATGGA
CAAGTCGGTGTGGTGGGTGGTGCCGGGGATCGCCTCGCTCGCGCTGTTCGCTTACCTGCTCACACTGGTCGAGGCCGATC
ATGCGGGGCGCACTTATGCTGCCTATGGCGGCGTTTATATCGCCGCGGCGCTGCTCTGGCTGTGGGCGGTCGAGGGGGCG
AAGCCCGACCGCTGGGATTTGATCGGCGCCGCGGTGTGCCTGGGCGGCGCGGCGATCATCCTGTTCGGGCCGCGGGGAGG
TTGA

Upstream 100 bases:

>100_bases
GTTTCGCTTTCTGATCCGTTCGGAAAGCGCCCGACACAGGAAGGGGCGGCCCGCGGGTCGCCCCTTTTCATTTGCGCAGC
GCCGGGGCACGGTGCCGCGC

Downstream 100 bases:

>100_bases
GGCTCTGATCCTCCCTGTGGCGAAGCCATGGGGAGGATTTATTCCGCGTCAGGCAGCGCCTGCTCGACGAGCGGCGCGAG
GGCGTCGGCCACGACCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTAFAYIGAALAEIAGCFAFWAWLRMDKSVWWVVPGIASLALFAYLLTLVEADHAGRTYAAYGGVYIAAALLWLWAVEGA
KPDRWDLIGAAVCLGGAAIILFGPRGG

Sequences:

>Translated_107_residues
MTAFAYIGAALAEIAGCFAFWAWLRMDKSVWWVVPGIASLALFAYLLTLVEADHAGRTYAAYGGVYIAAALLWLWAVEGA
KPDRWDLIGAAVCLGGAAIILFGPRGG
>Mature_106_residues
TAFAYIGAALAEIAGCFAFWAWLRMDKSVWWVVPGIASLALFAYLLTLVEADHAGRTYAAYGGVYIAAALLWLWAVEGAK
PDRWDLIGAAVCLGGAAIILFGPRGG

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=102, Percent_Identity=48.0392156862745, Blast_Score=85, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y701_SPHAL (Q1GVA0)

Other databases:

- EMBL:   CP000356
- RefSeq:   YP_615755.1
- GeneID:   4081790
- GenomeReviews:   CP000356_GR
- KEGG:   sal:Sala_0701
- NMPDR:   fig|317655.9.peg.649
- HOGENOM:   HBG313568
- OMA:   ALWVIPA
- BioCyc:   SALA317655:SALA_0701-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11381; Mature: 11250

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x111139ac)-; HASH(0x106ba570)-; HASH(0x1106bf74)-; HASH(0x10480874)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFAYIGAALAEIAGCFAFWAWLRMDKSVWWVVPGIASLALFAYLLTLVEADHAGRTYA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHH
AYGGVYIAAALLWLWAVEGAKPDRWDLIGAAVCLGGAAIILFGPRGG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEECCCCH
>Mature Secondary Structure 
TAFAYIGAALAEIAGCFAFWAWLRMDKSVWWVVPGIASLALFAYLLTLVEADHAGRTYA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHH
AYGGVYIAAALLWLWAVEGAKPDRWDLIGAAVCLGGAAIILFGPRGG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEECCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA