| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is gltP [H]
Identifier: 103486154
GI number: 103486154
Start: 672308
End: 673633
Strand: Direct
Name: gltP [H]
Synonym: Sala_0661
Alternate gene names: 103486154
Gene position: 672308-673633 (Clockwise)
Preceding gene: 103486153
Following gene: 103486156
Centisome position: 20.1
GC content: 64.48
Gene sequence:
>1326_bases ATGGCCGAAGCAAGCATCGTGATGCCGGCCCAAGGGCATGAAGAGGCGCGCGCGCGGCGTCTGCAATGGCGGATGCTGGT CGGGTTTGTCGTCGGCCTGCTCGCGGGACTCGCGGCGCATTATGGCGCTGCGGGCCAGCCGTGGGTTGACGAGGTGATTT TCTATCTCGGCAAGGTCGGTGACATTTTCCTTCGCCTGCTCTTCATGCTGGTCATCCCGCTGCTGGTGTCGGCGTTGATC GTCGGTGTCGCCGAAATGGGCGAGATGCGGGCGCTCAAGACCGTGGGATTGCGAACGCTGATCTATACGATCGTCGTGTC GTCGATCGCGGTTGTGATCAGCCTGCTGGTCGTCAACCTTCTCCAGCCGGGTGCCGGCGTCGATCCGGAGGTCGCGCGTT CGCTGATCGCCGACGGCGCCGAGCGCGCGGGCAGCATCATTCAGACGAGCCGCGAGGCCAAGGCCGGCGCCGACGCGATC GTCGCGATCGTCCCCAATAATTTTTTCCTCGCGATGAGCCAGAATGACGTGCTTGCGGTGATGTTCTTCGCGCTGTTTTT CGGCATCGGCCTGATGATGGTGCAGACGCCGCAGACGCAGGCGCTGAAAACCGCGATCGAGGGCGTGTTCGAGGTTGCGA TGAAGCTGATCGGGCTGGTCATCCGCCTCGCGCCGATCGCGATCTTCTGTTTCATGTTCAACCTCGGCGCGCAGTTCGGC GTCGATCTGCTCGTGCGCCTGTCGGCCTTCGTCGGTGTGGTGCTGCTTGCGCTCGGGCTTCAGATGTTCGTGGTCTTTCC GATCCTGCTCAAGACGCTGGCGGGGAAATCGCCGATCGCCTTCTTCCGCGAAACGCAGGAAGCAACGGTGATGGCTTTTT CGACCGCCTCGTCAAACGCGACGCTGCCCACGGCGCTGCGCGTCGCCCGGAACCAGTTGCACCTGCCCGACCGGGTCGCG CGCTTCGTGCTGACCATCGGCGCGACGGCGAACCAGAATGGCACGGCGATGTTCGAAGGGGTGACGGTGATCTTCCTCGC GCAATTCTTCGGGGTCGACCTGACGCTGCAGCAACAGATCATGGTGATGGCCGTGTGCATCCTTGGCGGCATCGGCACGG CGGGCGTTCCGGCGGGTTCGCTGCCGGTGATCGCGCTGATCCTTGCCATGGTCGGTGTCCCCCCGGCGGGCATCGGGCTG GTGCTCGGCGTCGACCGTTTCCTCGACATGTGCCGCACGACGCTGAACGTCATCGGCGACCTTGTCGCGGCGACGGTCGT TTCGGCCGGGATCGACGATCGGCCGGAAGGGGACAGCCCCGGCTGA
Upstream 100 bases:
>100_bases TGGCTGCGATCAGCCTGTTGATGTGAACGGTGCGGTTGCGCGCTATTTTGGGCACCGCTAGGGTCCGCGCCCTATTGGGT CGCAAGCAGGGGAAAAGTGG
Downstream 100 bases:
>100_bases TCCTTTTGGCTATTGATCGCGCACTTTGTTGGGCCGGTCGACGCGGTTGGCGCGCGCGGGGGGCGGGGGCGCCGATGGCG TGTCCGCTCTCGGCGGCGGA
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MAEASIVMPAQGHEEARARRLQWRMLVGFVVGLLAGLAAHYGAAGQPWVDEVIFYLGKVGDIFLRLLFMLVIPLLVSALI VGVAEMGEMRALKTVGLRTLIYTIVVSSIAVVISLLVVNLLQPGAGVDPEVARSLIADGAERAGSIIQTSREAKAGADAI VAIVPNNFFLAMSQNDVLAVMFFALFFGIGLMMVQTPQTQALKTAIEGVFEVAMKLIGLVIRLAPIAIFCFMFNLGAQFG VDLLVRLSAFVGVVLLALGLQMFVVFPILLKTLAGKSPIAFFRETQEATVMAFSTASSNATLPTALRVARNQLHLPDRVA RFVLTIGATANQNGTAMFEGVTVIFLAQFFGVDLTLQQQIMVMAVCILGGIGTAGVPAGSLPVIALILAMVGVPPAGIGL VLGVDRFLDMCRTTLNVIGDLVAATVVSAGIDDRPEGDSPG
Sequences:
>Translated_441_residues MAEASIVMPAQGHEEARARRLQWRMLVGFVVGLLAGLAAHYGAAGQPWVDEVIFYLGKVGDIFLRLLFMLVIPLLVSALI VGVAEMGEMRALKTVGLRTLIYTIVVSSIAVVISLLVVNLLQPGAGVDPEVARSLIADGAERAGSIIQTSREAKAGADAI VAIVPNNFFLAMSQNDVLAVMFFALFFGIGLMMVQTPQTQALKTAIEGVFEVAMKLIGLVIRLAPIAIFCFMFNLGAQFG VDLLVRLSAFVGVVLLALGLQMFVVFPILLKTLAGKSPIAFFRETQEATVMAFSTASSNATLPTALRVARNQLHLPDRVA RFVLTIGATANQNGTAMFEGVTVIFLAQFFGVDLTLQQQIMVMAVCILGGIGTAGVPAGSLPVIALILAMVGVPPAGIGL VLGVDRFLDMCRTTLNVIGDLVAATVVSAGIDDRPEGDSPG >Mature_440_residues AEASIVMPAQGHEEARARRLQWRMLVGFVVGLLAGLAAHYGAAGQPWVDEVIFYLGKVGDIFLRLLFMLVIPLLVSALIV GVAEMGEMRALKTVGLRTLIYTIVVSSIAVVISLLVVNLLQPGAGVDPEVARSLIADGAERAGSIIQTSREAKAGADAIV AIVPNNFFLAMSQNDVLAVMFFALFFGIGLMMVQTPQTQALKTAIEGVFEVAMKLIGLVIRLAPIAIFCFMFNLGAQFGV DLLVRLSAFVGVVLLALGLQMFVVFPILLKTLAGKSPIAFFRETQEATVMAFSTASSNATLPTALRVARNQLHLPDRVAR FVLTIGATANQNGTAMFEGVTVIFLAQFFGVDLTLQQQIMVMAVCILGGIGTAGVPAGSLPVIALILAMVGVPPAGIGLV LGVDRFLDMCRTTLNVIGDLVAATVVSAGIDDRPEGDSPG
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI169790839, Length=425, Percent_Identity=29.6470588235294, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI40254478, Length=475, Percent_Identity=28, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI66773030, Length=463, Percent_Identity=27.4298056155508, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI4827012, Length=265, Percent_Identity=31.6981132075472, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI21314632, Length=411, Percent_Identity=25.5474452554745, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI194239697, Length=183, Percent_Identity=36.6120218579235, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI223468564, Length=269, Percent_Identity=30.4832713754647, Blast_Score=115, Evalue=8e-26, Organism=Homo sapiens, GI223468566, Length=269, Percent_Identity=30.4832713754647, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI5032093, Length=266, Percent_Identity=30.4511278195489, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI301601644, Length=170, Percent_Identity=37.0588235294118, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI262359914, Length=359, Percent_Identity=27.8551532033426, Blast_Score=101, Evalue=2e-21, Organism=Escherichia coli, GI1790514, Length=408, Percent_Identity=31.8627450980392, Blast_Score=224, Evalue=9e-60, Organism=Escherichia coli, GI1789947, Length=426, Percent_Identity=29.81220657277, Blast_Score=154, Evalue=2e-38, Organism=Escherichia coli, GI1788024, Length=437, Percent_Identity=28.1464530892449, Blast_Score=121, Evalue=8e-29, Organism=Escherichia coli, GI1789473, Length=257, Percent_Identity=26.4591439688716, Blast_Score=65, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71996953, Length=460, Percent_Identity=28.4782608695652, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17537407, Length=414, Percent_Identity=27.536231884058, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71983099, Length=415, Percent_Identity=29.6385542168675, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI71983106, Length=415, Percent_Identity=29.6385542168675, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17541374, Length=414, Percent_Identity=28.2608695652174, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI193206505, Length=402, Percent_Identity=27.8606965174129, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI193206654, Length=418, Percent_Identity=27.0334928229665, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI24583025, Length=430, Percent_Identity=25.5813953488372, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI17137668, Length=430, Percent_Identity=25.5813953488372, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI24583023, Length=430, Percent_Identity=25.5813953488372, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI281360483, Length=437, Percent_Identity=26.3157894736842, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI17137666, Length=437, Percent_Identity=26.3157894736842, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI281360481, Length=437, Percent_Identity=26.3157894736842, Blast_Score=96, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 46524; Mature: 46393
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEASIVMPAQGHEEARARRLQWRMLVGFVVGLLAGLAAHYGAAGQPWVDEVIFYLGKVG CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH DIFLRLLFMLVIPLLVSALIVGVAEMGEMRALKTVGLRTLIYTIVVSSIAVVISLLVVNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQPGAGVDPEVARSLIADGAERAGSIIQTSREAKAGADAIVAIVPNNFFLAMSQNDVLAV HCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCHHHH MFFALFFGIGLMMVQTPQTQALKTAIEGVFEVAMKLIGLVIRLAPIAIFCFMFNLGAQFG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDLLVRLSAFVGVVLLALGLQMFVVFPILLKTLAGKSPIAFFRETQEATVMAFSTASSNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHEEEEEEECCCCC TLPTALRVARNQLHLPDRVARFVLTIGATANQNGTAMFEGVTVIFLAQFFGVDLTLQQQI CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH MVMAVCILGGIGTAGVPAGSLPVIALILAMVGVPPAGIGLVLGVDRFLDMCRTTLNVIGD HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LVAATVVSAGIDDRPEGDSPG HHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AEASIVMPAQGHEEARARRLQWRMLVGFVVGLLAGLAAHYGAAGQPWVDEVIFYLGKVG CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH DIFLRLLFMLVIPLLVSALIVGVAEMGEMRALKTVGLRTLIYTIVVSSIAVVISLLVVNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQPGAGVDPEVARSLIADGAERAGSIIQTSREAKAGADAIVAIVPNNFFLAMSQNDVLAV HCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCHHHH MFFALFFGIGLMMVQTPQTQALKTAIEGVFEVAMKLIGLVIRLAPIAIFCFMFNLGAQFG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDLLVRLSAFVGVVLLALGLQMFVVFPILLKTLAGKSPIAFFRETQEATVMAFSTASSNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHEEEEEEECCCCC TLPTALRVARNQLHLPDRVARFVLTIGATANQNGTAMFEGVTVIFLAQFFGVDLTLQQQI CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH MVMAVCILGGIGTAGVPAGSLPVIALILAMVGVPPAGIGLVLGVDRFLDMCRTTLNVIGD HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LVAATVVSAGIDDRPEGDSPG HHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]