The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is dnaJ [C]

Identifier: 103486139

GI number: 103486139

Start: 659601

End: 660131

Strand: Reverse

Name: dnaJ [C]

Synonym: Sala_0646

Alternate gene names: 103486139

Gene position: 660131-659601 (Counterclockwise)

Preceding gene: 103486144

Following gene: 103486138

Centisome position: 19.73

GC content: 68.55

Gene sequence:

>531_bases
GTGCCCGGCTGCCGCGAGGCCGGAGAGTTTCGCGCACCCGCATCGGCGCGCCGCTCGTCCGACGGCCCGCCGCCCTGGCG
CTGGCTGTGCCTCGAACATGTGCGCGCGTTCAACGCGGGCTATAATTTTTTCGAGGGGATGAGCGCCGATCAGATCATGG
CGGCGCAATCGCCAACCGCGGGCTGGGAAACCGAAAGCCGCGCCTTTCGGCCCGCGGGCAGCGCCGACCTGCCGCCGCGC
TGGGCCGATTTCAAGGATCCGATGGACGCGCTCGGCGCGCGGTTCCGGCAGCGGATGGACGAAGCGCGACGCGAGGTGGC
GAACCCGCGCTTCACGCGCGAGGAGCATCGCGCCATGCAGCTGATGGATTTGCCGCCCGACGCCGACCGCGCCGCGCTCC
GCCGCCGCTACAGCGAGCTTGTACGCAAATATCATCCCGACCGTAATGGCGGCGACCGTCGTTTCGAGGCGCGACTCGGC
CAAGTGGTCGAAGCTTATCAGTTGCTGAGGAAAACCGCGGCGTTCGCATAG

Upstream 100 bases:

>100_bases
CTCCTCCCTCCCCGCCCTTCGATTCCGAAAGCCCGTTTTGCCCTCCTCCCCCCGCCCTAACCGTTTTCATGGCCGCGTGC
CGCGCGAGGCGCCCTGCGCG

Downstream 100 bases:

>100_bases
GAGAAAGGCGATGACCGATTTGAATGCGGCCCGGATCGAGGTGGTGCGACGGCACATGGCGCTGGAGATCGCGCATGATT
GGGACGGCGTCATCGCGACC

Product: heat shock protein DnaJ-like protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MPGCREAGEFRAPASARRSSDGPPPWRWLCLEHVRAFNAGYNFFEGMSADQIMAAQSPTAGWETESRAFRPAGSADLPPR
WADFKDPMDALGARFRQRMDEARREVANPRFTREEHRAMQLMDLPPDADRAALRRRYSELVRKYHPDRNGGDRRFEARLG
QVVEAYQLLRKTAAFA

Sequences:

>Translated_176_residues
MPGCREAGEFRAPASARRSSDGPPPWRWLCLEHVRAFNAGYNFFEGMSADQIMAAQSPTAGWETESRAFRPAGSADLPPR
WADFKDPMDALGARFRQRMDEARREVANPRFTREEHRAMQLMDLPPDADRAALRRRYSELVRKYHPDRNGGDRRFEARLG
QVVEAYQLLRKTAAFA
>Mature_175_residues
PGCREAGEFRAPASARRSSDGPPPWRWLCLEHVRAFNAGYNFFEGMSADQIMAAQSPTAGWETESRAFRPAGSADLPPRW
ADFKDPMDALGARFRQRMDEARREVANPRFTREEHRAMQLMDLPPDADRAALRRRYSELVRKYHPDRNGGDRRFEARLGQ
VVEAYQLLRKTAAFA

Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ [H]

EC number: NA

Molecular weight: Translated: 20171; Mature: 20040

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGCREAGEFRAPASARRSSDGPPPWRWLCLEHVRAFNAGYNFFEGMSADQIMAAQSPTA
CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCCC
GWETESRAFRPAGSADLPPRWADFKDPMDALGARFRQRMDEARREVANPRFTREEHRAMQ
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LMDLPPDADRAALRRRYSELVRKYHPDRNGGDRRFEARLGQVVEAYQLLRKTAAFA
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PGCREAGEFRAPASARRSSDGPPPWRWLCLEHVRAFNAGYNFFEGMSADQIMAAQSPTA
CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCCC
GWETESRAFRPAGSADLPPRWADFKDPMDALGARFRQRMDEARREVANPRFTREEHRAMQ
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LMDLPPDADRAALRRRYSELVRKYHPDRNGGDRRFEARLGQVVEAYQLLRKTAAFA
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1917840 [H]