| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486124
Identifier: 103486124
GI number: 103486124
Start: 641971
End: 642459
Strand: Reverse
Name: 103486124
Synonym: Sala_0631
Alternate gene names: NA
Gene position: 642459-641971 (Counterclockwise)
Preceding gene: 103486125
Following gene: 103486120
Centisome position: 19.21
GC content: 63.39
Gene sequence:
>489_bases ATGGAACGGATCGAAACCGAAGCATCGGGCGGGTGCCAGTGCGGCGCGGTGCGCTATCATGTCAGTGCGGTGCTCGACAC GTCGCACATCTGCCATTGCCGGATGTGCCAGAAGGCGGCGGGCAATTTCTTCATCGCGCTGATCGGCGTGCCGCGCGACG CGATTCGCTGGACGCGCGGAAGCCCGGCAACATTCAACAGTTCGGACAAGGCGGCGCGCGGTTTCTGCCGCGACTGTGGA ACGCCGCTCAGCTATGATTATTTCGACAGCAAGCATATCAACCTGACGACGGGGTCGTTCGACGATCCATCGCAGTTCCC ACCGCGCTTCCAGTTCGGTCTCGAAGGGCAGATGCCCTGGTTCGCGGAGCTTTCGATCCCGGCCGAAGGGACGACCGAAG AGACGATGGCGGCCTATGTCGGCGCGATCAAGGCGAGCAACCATCAGCACCCCGACCACGACACGGACGTCTGGCCGGAG GGGCGGTAG
Upstream 100 bases:
>100_bases GCGGACATCTGCCGCTGGCGGAAGTGATCGCGCGCTTCGGGACGTGACGCCATGCGGCGGCGCGGTTGCGAGGCCGCGCC GCCGCTGATAGCTTTCGGTC
Downstream 100 bases:
>100_bases GTCGCGTGCGCGGCGTCAGGCGCCCGCGCGAATCAGATGGTCGAAGGCCGAGAGCGACGCCTTTGACCCCTCGCCCATCG CGATGACGATCTGCTTGTAG
Product: glutathione-dependent formaldehyde-activating, GFA
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde-Activating
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MERIETEASGGCQCGAVRYHVSAVLDTSHICHCRMCQKAAGNFFIALIGVPRDAIRWTRGSPATFNSSDKAARGFCRDCG TPLSYDYFDSKHINLTTGSFDDPSQFPPRFQFGLEGQMPWFAELSIPAEGTTEETMAAYVGAIKASNHQHPDHDTDVWPE GR
Sequences:
>Translated_162_residues MERIETEASGGCQCGAVRYHVSAVLDTSHICHCRMCQKAAGNFFIALIGVPRDAIRWTRGSPATFNSSDKAARGFCRDCG TPLSYDYFDSKHINLTTGSFDDPSQFPPRFQFGLEGQMPWFAELSIPAEGTTEETMAAYVGAIKASNHQHPDHDTDVWPE GR >Mature_162_residues MERIETEASGGCQCGAVRYHVSAVLDTSHICHCRMCQKAAGNFFIALIGVPRDAIRWTRGSPATFNSSDKAARGFCRDCG TPLSYDYFDSKHINLTTGSFDDPSQFPPRFQFGLEGQMPWFAELSIPAEGTTEETMAAYVGAIKASNHQHPDHDTDVWPE GR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17879; Mature: 17879
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERIETEASGGCQCGAVRYHVSAVLDTSHICHCRMCQKAAGNFFIALIGVPRDAIRWTRG CCCCCCCCCCCCEECHHEEEEEHHHCCCCHHHHHHHHHCCCCEEEEEEECCHHHHEECCC SPATFNSSDKAARGFCRDCGTPLSYDYFDSKHINLTTGSFDDPSQFPPRFQFGLEGQMPW CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCE FAELSIPAEGTTEETMAAYVGAIKASNHQHPDHDTDVWPEGR EEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MERIETEASGGCQCGAVRYHVSAVLDTSHICHCRMCQKAAGNFFIALIGVPRDAIRWTRG CCCCCCCCCCCCEECHHEEEEEHHHCCCCHHHHHHHHHCCCCEEEEEEECCHHHHEECCC SPATFNSSDKAARGFCRDCGTPLSYDYFDSKHINLTTGSFDDPSQFPPRFQFGLEGQMPW CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCE FAELSIPAEGTTEETMAAYVGAIKASNHQHPDHDTDVWPEGR EEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA