| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is aacC1 [H]
Identifier: 103486119
GI number: 103486119
Start: 638262
End: 638720
Strand: Reverse
Name: aacC1 [H]
Synonym: Sala_0626
Alternate gene names: 103486119
Gene position: 638720-638262 (Counterclockwise)
Preceding gene: 103486120
Following gene: 103486118
Centisome position: 19.09
GC content: 69.28
Gene sequence:
>459_bases ATGATCGTCCGCCGCCTCGGCCCCGGCGACATCGCCGCAGTGCGCGCGCTGAACGCGGTCTATGGCGCCGCCTTCGACGA CCCCGAAACCTATCGCGCCGACCGTCCCGACGACGCATGGCTGGCGCGCCAGCTTGGCCGCGAGGGGGTGATCGTGCTGG TCGCCGAACTGGACGGCAACATCGTCGGCGGCCTCACCGCCTATGAGCTACCGAAGCTTGAGGCGGCGCGCAGCGAAATC TATCTCTATGACCTCGCGGTCGATGCCGCGCACCGCCGCTGCGGTATCGCCACCGCGCTGATCGGGGAGCTTCAACATAT CGCCGCCGAAACCGGCGCCTGGGCGGTGTTCGTCCAGGCCGACCATGGCGACGACCCCGCGGTTGCGTTATACACCGGGC TCGGCGCGCGCGAGGATGTGATGCATTTCGACCTGCCCCCGCGACCGCGCGGCGCATAG
Upstream 100 bases:
>100_bases CCGCAAAAATCCTTCTCCCGGGCTCGGGCGGGTTGGGTCGCGAGTTCGTGATTTCGGCCAGGCGGCTCGGCTGGCAGGGC GTCGAGCGGTGGCGCGCGCG
Downstream 100 bases:
>100_bases GAAGAAAGCGGAACCATCGCGCTAGGCCGCCCCCTTTCCCCCTGCTACACCGCCCGCCATGTCCGAGAAGAATCACCTCT ATCTGGTCGATGGCTCCAGC
Product: gentamicin 3'-N-acetyltransferase
Products: NA
Alternate protein names: AAC(3)-I; Aminoglycoside N(3')-acetyltransferase I; Gentamicin acetyltransferase I [H]
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MIVRRLGPGDIAAVRALNAVYGAAFDDPETYRADRPDDAWLARQLGREGVIVLVAELDGNIVGGLTAYELPKLEAARSEI YLYDLAVDAAHRRCGIATALIGELQHIAAETGAWAVFVQADHGDDPAVALYTGLGAREDVMHFDLPPRPRGA
Sequences:
>Translated_152_residues MIVRRLGPGDIAAVRALNAVYGAAFDDPETYRADRPDDAWLARQLGREGVIVLVAELDGNIVGGLTAYELPKLEAARSEI YLYDLAVDAAHRRCGIATALIGELQHIAAETGAWAVFVQADHGDDPAVALYTGLGAREDVMHFDLPPRPRGA >Mature_152_residues MIVRRLGPGDIAAVRALNAVYGAAFDDPETYRADRPDDAWLARQLGREGVIVLVAELDGNIVGGLTAYELPKLEAARSEI YLYDLAVDAAHRRCGIATALIGELQHIAAETGAWAVFVQADHGDDPAVALYTGLGAREDVMHFDLPPRPRGA
Specific function: Responsible for gentamicin resistance and has a limited substrate range [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.60 [H]
Molecular weight: Translated: 16320; Mature: 16320
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVRRLGPGDIAAVRALNAVYGAAFDDPETYRADRPDDAWLARQLGREGVIVLVAELDGN CEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCC IVGGLTAYELPKLEAARSEIYLYDLAVDAAHRRCGIATALIGELQHIAAETGAWAVFVQA EECCCHHHCCCCCHHCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE DHGDDPAVALYTGLGAREDVMHFDLPPRPRGA CCCCCCEEEEEECCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MIVRRLGPGDIAAVRALNAVYGAAFDDPETYRADRPDDAWLARQLGREGVIVLVAELDGN CEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCC IVGGLTAYELPKLEAARSEIYLYDLAVDAAHRRCGIATALIGELQHIAAETGAWAVFVQA EECCCHHHCCCCCHHCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE DHGDDPAVALYTGLGAREDVMHFDLPPRPRGA CCCCCCEEEEEECCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2549372 [H]