Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486073

Identifier: 103486073

GI number: 103486073

Start: 590147

End: 590419

Strand: Reverse

Name: 103486073

Synonym: Sala_0580

Alternate gene names: NA

Gene position: 590419-590147 (Counterclockwise)

Preceding gene: 103486074

Following gene: 103486072

Centisome position: 17.65

GC content: 60.07

Gene sequence:

>273_bases
ATGGATGCTACGACGCCGATCACGACGCGGCTTGACGCCGTAACCCTGGAAACGCTCGACAGATTGGCGGAACGCTATGA
TCGCTCGCGCTCGTGGCTCGTTGCGCAGGCGGTTCGACAGTTTGTCGAACGCGAAGCCGAGATGCTCGCAATCATCGAGG
AAGGCGAGCGATCTGCCCGCGAGGAGCCGCTGATCTCGCACGAAGAGATGAAAAAGCTGATCGCCGCGAAGCGCGCCGAA
CTCCGTTCAAAGCACGATAAAGCGACAGCGTGA

Upstream 100 bases:

>100_bases
CCGGTCGCGCTGGAAGGGCTGACGACGTACAAGTGGCTGGTGCGCGGGAGCGGACAGTTGCGGCCTTGAGTCGTTTGTAT
ACAAATGATATGTGCACAGC

Downstream 100 bases:

>100_bases
TCAATGTCCAATGGTCGCAGGCAGCGACCGAAGACCTCTTGAACAATGCCGACGGCCTCTATCTGGTCGATTTCGATCTC
GCGGACGCGTTGCTGTCCGA

Product: CopG family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MDATTPITTRLDAVTLETLDRLAERYDRSRSWLVAQAVRQFVEREAEMLAIIEEGERSAREEPLISHEEMKKLIAAKRAE
LRSKHDKATA

Sequences:

>Translated_90_residues
MDATTPITTRLDAVTLETLDRLAERYDRSRSWLVAQAVRQFVEREAEMLAIIEEGERSAREEPLISHEEMKKLIAAKRAE
LRSKHDKATA
>Mature_90_residues
MDATTPITTRLDAVTLETLDRLAERYDRSRSWLVAQAVRQFVEREAEMLAIIEEGERSAREEPLISHEEMKKLIAAKRAE
LRSKHDKATA

Specific function: Unknown

COG id: COG3905

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10351; Mature: 10351

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDATTPITTRLDAVTLETLDRLAERYDRSRSWLVAQAVRQFVEREAEMLAIIEEGERSAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEPLISHEEMKKLIAAKRAELRSKHDKATA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDATTPITTRLDAVTLETLDRLAERYDRSRSWLVAQAVRQFVEREAEMLAIIEEGERSAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEPLISHEEMKKLIAAKRAELRSKHDKATA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA