| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485938
Identifier: 103485938
GI number: 103485938
Start: 456270
End: 456875
Strand: Reverse
Name: 103485938
Synonym: Sala_0445
Alternate gene names: NA
Gene position: 456875-456270 (Counterclockwise)
Preceding gene: 103485939
Following gene: 103485937
Centisome position: 13.66
GC content: 68.81
Gene sequence:
>606_bases ATGGGCAGTGGCAACAGCGGTACGACGCGGCCTCGCCTTGCCGATCCCGACGACAGCGGCCCGGATATCCCCCCTCCCGT CCGGTTCCCTGGCGCCGCGCCCATCATCGTCACAGCATCGATGGGCGCGGCAGATCAGCGCCGTTTCGACGCGCTCCGCG CGGCCCATTTTCCACCCGAACGCAATCATCTCGCGGCGCATGTCACGCTGTTCCATCAACTACCGCCGTCGTGCCTCGAC GAGCTTGCGCGCCTGCTCCGCAGGATCGCCGCCGACACGCCGCCGCCCGCTGCGATGCTGCGCGAGGTCTATTTGCTGGG GCGGGGCGTCGCCTTCCGCATCGACAGCCCGGATCTCCTTGCGATTCGCGAACGCATCGCCGATCATTTTTGGGGGATGC TCACCGCGCAGGACCGGGGGACGCCGCGGCTCCACATCACCGTCCAGAACAAGGCGACGACGGCGGCAGCACGCGCGCTG CTCGCCGCGCTGGCCGCCGACTTCCGCCCGCGCTCGCTGACGATCGCCGGACTCGCGGCGTATCATTATCGCGGAGGCCC CTGGGAATCGGCATTTGCCCTCTCTTTCCGGGGGGCACGCAGATGA
Upstream 100 bases:
>100_bases CAATTTGATCGAGTGCAGCGATCAATCTGACGCATTTAATCGATTGGATCGCGGCGTCGTGATCGGACAGAAACATCGGC ATCGGGAAAGGTCGTTCCCC
Downstream 100 bases:
>100_bases TATTGACCGGCGCGACGAGCCTGCCTATAGGCGCGGCTCGCCCGAAATGGCGGCCCCATGGGGCGGAGTAGCTCAGCAGG TTAGAGCAGCGGAATCATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MGSGNSGTTRPRLADPDDSGPDIPPPVRFPGAAPIIVTASMGAADQRRFDALRAAHFPPERNHLAAHVTLFHQLPPSCLD ELARLLRRIAADTPPPAAMLREVYLLGRGVAFRIDSPDLLAIRERIADHFWGMLTAQDRGTPRLHITVQNKATTAAARAL LAALAADFRPRSLTIAGLAAYHYRGGPWESAFALSFRGARR
Sequences:
>Translated_201_residues MGSGNSGTTRPRLADPDDSGPDIPPPVRFPGAAPIIVTASMGAADQRRFDALRAAHFPPERNHLAAHVTLFHQLPPSCLD ELARLLRRIAADTPPPAAMLREVYLLGRGVAFRIDSPDLLAIRERIADHFWGMLTAQDRGTPRLHITVQNKATTAAARAL LAALAADFRPRSLTIAGLAAYHYRGGPWESAFALSFRGARR >Mature_200_residues GSGNSGTTRPRLADPDDSGPDIPPPVRFPGAAPIIVTASMGAADQRRFDALRAAHFPPERNHLAAHVTLFHQLPPSCLDE LARLLRRIAADTPPPAAMLREVYLLGRGVAFRIDSPDLLAIRERIADHFWGMLTAQDRGTPRLHITVQNKATTAAARALL AALAADFRPRSLTIAGLAAYHYRGGPWESAFALSFRGARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21796; Mature: 21665
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSGNSGTTRPRLADPDDSGPDIPPPVRFPGAAPIIVTASMGAADQRRFDALRAAHFPPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC RNHLAAHVTLFHQLPPSCLDELARLLRRIAADTPPPAAMLREVYLLGRGVAFRIDSPDLL CCCHHHEEHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHH AIRERIADHFWGMLTAQDRGTPRLHITVQNKATTAAARALLAALAADFRPRSLTIAGLAA HHHHHHHHHHHCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHH YHYRGGPWESAFALSFRGARR HHCCCCCCCCEEEEECCCCCC >Mature Secondary Structure GSGNSGTTRPRLADPDDSGPDIPPPVRFPGAAPIIVTASMGAADQRRFDALRAAHFPPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC RNHLAAHVTLFHQLPPSCLDELARLLRRIAADTPPPAAMLREVYLLGRGVAFRIDSPDLL CCCHHHEEHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHH AIRERIADHFWGMLTAQDRGTPRLHITVQNKATTAAARALLAALAADFRPRSLTIAGLAA HHHHHHHHHHHCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHH YHYRGGPWESAFALSFRGARR HHCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA