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The map label for this gene is nmoT [H]

Identifier: 103485926

GI number: 103485926

Start: 441560

End: 443074

Strand: Reverse

Name: nmoT [H]

Synonym: Sala_0433

Alternate gene names: 103485926

Gene position: 443074-441560 (Counterclockwise)

Preceding gene: 103485928

Following gene: 103485925

Centisome position: 13.25

GC content: 67.06

Gene sequence:

>1515_bases
ATGTTGGTGGTGGAGACGGTTGTTCGGATACGGCGGGAGCACGCGAGCGGGAAGGCGATCAAGGCGATTGCGCGCGATCT
GCGGCTGTCGCGCAAGGTGGTTCGCAAGGCGATCCGGGCGCCGGAAGGCGCGTTCGATTATCGCCGCACGGTTCAACCAC
TGCCCCGGCTTGGGCCGTTCCAAGAGCGGCTCGATACGCTGTTGATGGAGAACGAGGCTCGGCACCGGCGTGACCGGCTG
CGCATGACCCGGATCCATGATCTGTTGTGCCGTGAGGGCTTTGAGGGATCCTACGACGCGGTCCGGCGCTACGCCCGGCG
CTGGACGGAAGCGAGGCGCAAGGATGCGGGTGATGGGGCGCCCGCGTTCATCCCGCTCATGTTCAAGCCAGGCGAGGCCT
ACCAGTTCGACTGGAGCCACGAGGATGTGGAGATCGCGGGCAAGCCGATGCGGGTGAAGGTGGCGCAGATGCGGTTGTGC
GCGTCGCGCGCGGTCTACGTCAGGGCCTATCCGCGCGAGACGCAGGAGATGGTGTTCGACGCCCATGCGCGCGGCTTTGC
CTTCTTCGGCGGCGTTCCCCTGCGCGGCATCTACGATAACATGAAGACCGCGGTCACCACCGTGTTCGTCGGCAAGGAGC
GGGTGTTCAACCGCCGCTTTCTGGTCATGGCCGATCATTACATGGTCGAGCCCACGGCCTGCTCGCCGGCGGCGGGATGG
GAGAAGGGTCAGGTTGAACACCAGGTGCAGACCATCCGGGGCCGCTTCTTCCAGCCTCGCCTGCGCTTTGCCAGCATCGA
GGAGCTCAACGGGTGGCTGGAGGCTGAGTGCCTGCGCTGGGCCGCAACGCACGCCCATCCCGAGCAGAAGGAGCTGACCG
TCGCCGAGGCGCTGGAGCTCGAGCGGCCAGCCCTGCAGCCGATGCTGGCGCCCTTCGACGGCTTCCACGAGACCACCCAT
GCCGTGACCGGCACGTGCCTGATCAGCTTCGACCGTAACCGCTACTCGGTCATGGCCAAGGCGGCGCGGCGGGCCGTTCA
GGTCCGCGCCTATGCCGACCGCATCGTCGTGCGCCTAGGCGACGAGGTAATCGCCGAGCATGCCCGGCACTTCGGCCGCG
ACCGGACGATCTATAATCCCTGGCATTACCTGCCAGTGCTGGCGCACAAGCCTGGGGCCTTGCGGAACGGCGCACCCTTC
CAGGGGTGGGACCTGCCACCGGCACTGACGCGGTTGCGGCGCAAGCTGGGCGGCGGTGATGACGCCGACCGCCGCTTCGT
GCGCGTGCTGGCATCGGTAATGACCGATGGCTTGGAAGCGGTCGAGGCCGCGATCCGGGAGGCGCTTGATAGCGGTGCTG
TCAGCGACGAGGTCATCCTCAACATCCTGGCCCGATACCGGGACCCGCCATCCGAGCGCCCCCTGGATGTGGTCGCCGAT
CTCAAGCTCAGCCACCCGCCGATCGCGGACTGCGCGCGCTACGATACGGTGCGAGGCCTCCATGCAGCGGCATGA

Upstream 100 bases:

>100_bases
TGCAAAAGGGACCCCGTTAGCGGGGTGATCGGCGTCTAAAAGGGACCCCTCATTCTGATGGTGTAGCAGGCTGCCTGGTT
TTCCAGGTGGTGAGATCGGG

Downstream 100 bases:

>100_bases
GATGATCGAGGCGATGCGCTCGCTCGGCCTCAAGGGCATGGCAGGAGCCTTCGACGAGGCGGTCACCACCGGGTTGCAGC
GCAAGCGCACGACCCACGAG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MLVVETVVRIRREHASGKAIKAIARDLRLSRKVVRKAIRAPEGAFDYRRTVQPLPRLGPFQERLDTLLMENEARHRRDRL
RMTRIHDLLCREGFEGSYDAVRRYARRWTEARRKDAGDGAPAFIPLMFKPGEAYQFDWSHEDVEIAGKPMRVKVAQMRLC
ASRAVYVRAYPRETQEMVFDAHARGFAFFGGVPLRGIYDNMKTAVTTVFVGKERVFNRRFLVMADHYMVEPTACSPAAGW
EKGQVEHQVQTIRGRFFQPRLRFASIEELNGWLEAECLRWAATHAHPEQKELTVAEALELERPALQPMLAPFDGFHETTH
AVTGTCLISFDRNRYSVMAKAARRAVQVRAYADRIVVRLGDEVIAEHARHFGRDRTIYNPWHYLPVLAHKPGALRNGAPF
QGWDLPPALTRLRRKLGGGDDADRRFVRVLASVMTDGLEAVEAAIREALDSGAVSDEVILNILARYRDPPSERPLDVVAD
LKLSHPPIADCARYDTVRGLHAAA

Sequences:

>Translated_504_residues
MLVVETVVRIRREHASGKAIKAIARDLRLSRKVVRKAIRAPEGAFDYRRTVQPLPRLGPFQERLDTLLMENEARHRRDRL
RMTRIHDLLCREGFEGSYDAVRRYARRWTEARRKDAGDGAPAFIPLMFKPGEAYQFDWSHEDVEIAGKPMRVKVAQMRLC
ASRAVYVRAYPRETQEMVFDAHARGFAFFGGVPLRGIYDNMKTAVTTVFVGKERVFNRRFLVMADHYMVEPTACSPAAGW
EKGQVEHQVQTIRGRFFQPRLRFASIEELNGWLEAECLRWAATHAHPEQKELTVAEALELERPALQPMLAPFDGFHETTH
AVTGTCLISFDRNRYSVMAKAARRAVQVRAYADRIVVRLGDEVIAEHARHFGRDRTIYNPWHYLPVLAHKPGALRNGAPF
QGWDLPPALTRLRRKLGGGDDADRRFVRVLASVMTDGLEAVEAAIREALDSGAVSDEVILNILARYRDPPSERPLDVVAD
LKLSHPPIADCARYDTVRGLHAAA
>Mature_504_residues
MLVVETVVRIRREHASGKAIKAIARDLRLSRKVVRKAIRAPEGAFDYRRTVQPLPRLGPFQERLDTLLMENEARHRRDRL
RMTRIHDLLCREGFEGSYDAVRRYARRWTEARRKDAGDGAPAFIPLMFKPGEAYQFDWSHEDVEIAGKPMRVKVAQMRLC
ASRAVYVRAYPRETQEMVFDAHARGFAFFGGVPLRGIYDNMKTAVTTVFVGKERVFNRRFLVMADHYMVEPTACSPAAGW
EKGQVEHQVQTIRGRFFQPRLRFASIEELNGWLEAECLRWAATHAHPEQKELTVAEALELERPALQPMLAPFDGFHETTH
AVTGTCLISFDRNRYSVMAKAARRAVQVRAYADRIVVRLGDEVIAEHARHFGRDRTIYNPWHYLPVLAHKPGALRNGAPF
QGWDLPPALTRLRRKLGGGDDADRRFVRVLASVMTDGLEAVEAAIREALDSGAVSDEVILNILARYRDPPSERPLDVVAD
LKLSHPPIADCARYDTVRGLHAAA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 57331; Mature: 57331

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVVETVVRIRREHASGKAIKAIARDLRLSRKVVRKAIRAPEGAFDYRRTVQPLPRLGPF
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCH
QERLDTLLMENEARHRRDRLRMTRIHDLLCREGFEGSYDAVRRYARRWTEARRKDAGDGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PAFIPLMFKPGEAYQFDWSHEDVEIAGKPMRVKVAQMRLCASRAVYVRAYPRETQEMVFD
CEEEEEEECCCCCEEECCCCCCCEECCCCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHH
AHARGFAFFGGVPLRGIYDNMKTAVTTVFVGKERVFNRRFLVMADHYMVEPTACSPAAGW
HHCCCEEEECCCCCHHHHHHHHHHHHHHEECHHHHHCCEEEEEECCEEECCCCCCCCCCC
EKGQVEHQVQTIRGRFFQPRLRFASIEELNGWLEAECLRWAATHAHPEQKELTVAEALEL
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ERPALQPMLAPFDGFHETTHAVTGTCLISFDRNRYSVMAKAARRAVQVRAYADRIVVRLG
CCHHHHHHHCCCCCHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DEVIAEHARHFGRDRTIYNPWHYLPVLAHKPGALRNGAPFQGWDLPPALTRLRRKLGGGD
HHHHHHHHHHCCCCCCEECCHHHCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
DADRRFVRVLASVMTDGLEAVEAAIREALDSGAVSDEVILNILARYRDPPSERPLDVVAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHC
LKLSHPPIADCARYDTVRGLHAAA
CCCCCCCHHHHHHHHHHCCHHHCC
>Mature Secondary Structure
MLVVETVVRIRREHASGKAIKAIARDLRLSRKVVRKAIRAPEGAFDYRRTVQPLPRLGPF
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCH
QERLDTLLMENEARHRRDRLRMTRIHDLLCREGFEGSYDAVRRYARRWTEARRKDAGDGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PAFIPLMFKPGEAYQFDWSHEDVEIAGKPMRVKVAQMRLCASRAVYVRAYPRETQEMVFD
CEEEEEEECCCCCEEECCCCCCCEECCCCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHH
AHARGFAFFGGVPLRGIYDNMKTAVTTVFVGKERVFNRRFLVMADHYMVEPTACSPAAGW
HHCCCEEEECCCCCHHHHHHHHHHHHHHEECHHHHHCCEEEEEECCEEECCCCCCCCCCC
EKGQVEHQVQTIRGRFFQPRLRFASIEELNGWLEAECLRWAATHAHPEQKELTVAEALEL
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ERPALQPMLAPFDGFHETTHAVTGTCLISFDRNRYSVMAKAARRAVQVRAYADRIVVRLG
CCHHHHHHHCCCCCHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DEVIAEHARHFGRDRTIYNPWHYLPVLAHKPGALRNGAPFQGWDLPPALTRLRRKLGGGD
HHHHHHHHHHCCCCCCEECCHHHCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
DADRRFVRVLASVMTDGLEAVEAAIREALDSGAVSDEVILNILARYRDPPSERPLDVVAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHC
LKLSHPPIADCARYDTVRGLHAAA
CCCCCCCHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023192 [H]