| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is zwf [H]
Identifier: 103485686
GI number: 103485686
Start: 200525
End: 202063
Strand: Direct
Name: zwf [H]
Synonym: Sala_0190
Alternate gene names: 103485686
Gene position: 200525-202063 (Clockwise)
Preceding gene: 103485682
Following gene: 103485687
Centisome position: 5.99
GC content: 63.55
Gene sequence:
>1539_bases ATGCGGCTTACGTATGCGCGTTGCATTCGGGGGGCGCATCCTCCACTTCTCTCACTGCTATCCAAGGGGACGAATGTGAG CGTCAAGGTCGAAACATTGGTGTTGTTCGGGGCAACGGGCGACCTGGCGCAGCGTATGCTTTTCCCCTCGCTCTACAATC TGCACATGGACGGACTGCTCGCCGACGCGCTGACGATCGTCGGGTCGGGGCGCTCGGCGATGGACCGCGACGCCTTTCGG GCGCAGGTCCGCGCCGCGCTGACCGAGTATCTGCCCGAAGACCGCATCGAGGCGGCGGTCGTCGACGGCTTCCTTGCGCG CATCGATTATTGCGCGATCGACGCTGGCGCTGGCACCGGCTATGCGGAACTCGCGGCTTTGCTCGGCGACCGCATGGCGC GCCCGATTGGCGTTTACCTCTCGACGCCGCCGTCGATGTTCGGACCGATCGCGCAGGGGCTTAAAGCTGCGAACATCGCG TGCGCCGAATGCCGTATCGCGATGGAAAAGCCGATCGGCCACGACCTCGCCTCGTCGCGCGAAGTCAATGCCCAGGTCGG CGACGCCTTTGCCGAGGACCGGGTGTTCCGCATCGACCATTATCTCGGCAAGGAAACGGTGCAGAATCTGCTCGCGCTGC GCTTTGCCAACATGTTGTTCGAACCGCTGTGGAACGCGCAGGCGATCGACCATGTCCAGATCACCGTTGCCGAAACCGTC GGGCTGGAGGGCCGCGTTTCCTATTATGACGGCGTCGGCGCGCTGAAGGACATGGTGCAGAATCACATGCTCCAACTGCT CGCAATCATCGCGATGGAGCCCCCGGCCAGCGTCGGGGCGACCGCAGTGCGCGACGAAAAGGTCAAGCTGTTGCGCTCCT TGCGCAAGATGACCGCGGAGGATGTAAAGGCGCACAGCGTCAAGGGCCAGTACAGCAGCGGCGCGGTTAACGGCGCCGCG GTCGCGGGCTATGCCGACGAACTCGGCCAGCCGTCGAACACCGAAACCTTCGTCGCCTTGAAGGCCTTTATCGACAATTG GCGGTGGAAGGGCGTGCCCTTTTACCTGCGCACCGGCAAACGGATGCCGCAGCGCAAATCCGAAGTGCTGATCCAGTTCA AGCCCGTGCCGCACAATATCTTCGCGCGCGTCGGTGCGGGCAAGCTCGACGCGAACATGATGATCATCAATTTGCAGCCC GAGGAAAATATCCGCGTCAAGGTGATGGCAAAGCAGCCGGGGCTCGACCGCGACGGGGTGAAGCTCAAGGAAGTGACGAT GGACGTCTCGCTCTCGCACAGCTTCGCGGGCGAGCGCCGCCGCATCGCCTACGAGCGCCTGCTGCTCGATTTCATCGAGG GCGACCAGACCCTCTTCGTGCGCCGCGACGAGGTCGAGGCGCAGTGGGAGTGGATCGACGCGATCCGCGATGCCTGGGAT CAGGTCGACATGACACCGCAAAGCTACACCGCTGGAAGCTGGGGGCCGAGTTCGGCGATCGCGCTGATCGAGCGCGACGG GGCGAGCTGGCATGATTGA
Upstream 100 bases:
>100_bases CGGGCCGAAGGCGGCCGGAGGCCAGCCAATCTCCAGCCTTCGGAAAGGCCGAACGATAGCGGGAGATTGCTTCGTCGCCT GCGGCTCCCCGCAATGACAT
Downstream 100 bases:
>100_bases GCGCACCCCAAACCTTCTCCCCTTGGGGGAGAAGGATACGAAGCCTTGGCGCGCAGCGCCTGGGCGCAGTTGGATGAGGG TCGCTGCCGTCGCTTTCGCC
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MRLTYARCIRGAHPPLLSLLSKGTNVSVKVETLVLFGATGDLAQRMLFPSLYNLHMDGLLADALTIVGSGRSAMDRDAFR AQVRAALTEYLPEDRIEAAVVDGFLARIDYCAIDAGAGTGYAELAALLGDRMARPIGVYLSTPPSMFGPIAQGLKAANIA CAECRIAMEKPIGHDLASSREVNAQVGDAFAEDRVFRIDHYLGKETVQNLLALRFANMLFEPLWNAQAIDHVQITVAETV GLEGRVSYYDGVGALKDMVQNHMLQLLAIIAMEPPASVGATAVRDEKVKLLRSLRKMTAEDVKAHSVKGQYSSGAVNGAA VAGYADELGQPSNTETFVALKAFIDNWRWKGVPFYLRTGKRMPQRKSEVLIQFKPVPHNIFARVGAGKLDANMMIINLQP EENIRVKVMAKQPGLDRDGVKLKEVTMDVSLSHSFAGERRRIAYERLLLDFIEGDQTLFVRRDEVEAQWEWIDAIRDAWD QVDMTPQSYTAGSWGPSSAIALIERDGASWHD
Sequences:
>Translated_512_residues MRLTYARCIRGAHPPLLSLLSKGTNVSVKVETLVLFGATGDLAQRMLFPSLYNLHMDGLLADALTIVGSGRSAMDRDAFR AQVRAALTEYLPEDRIEAAVVDGFLARIDYCAIDAGAGTGYAELAALLGDRMARPIGVYLSTPPSMFGPIAQGLKAANIA CAECRIAMEKPIGHDLASSREVNAQVGDAFAEDRVFRIDHYLGKETVQNLLALRFANMLFEPLWNAQAIDHVQITVAETV GLEGRVSYYDGVGALKDMVQNHMLQLLAIIAMEPPASVGATAVRDEKVKLLRSLRKMTAEDVKAHSVKGQYSSGAVNGAA VAGYADELGQPSNTETFVALKAFIDNWRWKGVPFYLRTGKRMPQRKSEVLIQFKPVPHNIFARVGAGKLDANMMIINLQP EENIRVKVMAKQPGLDRDGVKLKEVTMDVSLSHSFAGERRRIAYERLLLDFIEGDQTLFVRRDEVEAQWEWIDAIRDAWD QVDMTPQSYTAGSWGPSSAIALIERDGASWHD >Mature_512_residues MRLTYARCIRGAHPPLLSLLSKGTNVSVKVETLVLFGATGDLAQRMLFPSLYNLHMDGLLADALTIVGSGRSAMDRDAFR AQVRAALTEYLPEDRIEAAVVDGFLARIDYCAIDAGAGTGYAELAALLGDRMARPIGVYLSTPPSMFGPIAQGLKAANIA CAECRIAMEKPIGHDLASSREVNAQVGDAFAEDRVFRIDHYLGKETVQNLLALRFANMLFEPLWNAQAIDHVQITVAETV GLEGRVSYYDGVGALKDMVQNHMLQLLAIIAMEPPASVGATAVRDEKVKLLRSLRKMTAEDVKAHSVKGQYSSGAVNGAA VAGYADELGQPSNTETFVALKAFIDNWRWKGVPFYLRTGKRMPQRKSEVLIQFKPVPHNIFARVGAGKLDANMMIINLQP EENIRVKVMAKQPGLDRDGVKLKEVTMDVSLSHSFAGERRRIAYERLLLDFIEGDQTLFVRRDEVEAQWEWIDAIRDAWD QVDMTPQSYTAGSWGPSSAIALIERDGASWHD
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI109389365, Length=487, Percent_Identity=36.3449691991786, Blast_Score=300, Evalue=2e-81, Organism=Homo sapiens, GI108773793, Length=487, Percent_Identity=36.3449691991786, Blast_Score=300, Evalue=2e-81, Organism=Homo sapiens, GI52145310, Length=509, Percent_Identity=27.8978388998035, Blast_Score=176, Evalue=7e-44, Organism=Escherichia coli, GI1788158, Length=482, Percent_Identity=48.3402489626556, Blast_Score=467, Evalue=1e-133, Organism=Caenorhabditis elegans, GI17538218, Length=507, Percent_Identity=34.9112426035503, Blast_Score=308, Evalue=4e-84, Organism=Saccharomyces cerevisiae, GI6324088, Length=492, Percent_Identity=34.1463414634146, Blast_Score=268, Evalue=1e-72, Organism=Drosophila melanogaster, GI24643350, Length=510, Percent_Identity=35.0980392156863, Blast_Score=302, Evalue=4e-82, Organism=Drosophila melanogaster, GI24643352, Length=509, Percent_Identity=35.1669941060904, Blast_Score=301, Evalue=8e-82, Organism=Drosophila melanogaster, GI221513548, Length=499, Percent_Identity=27.8557114228457, Blast_Score=182, Evalue=6e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 56350; Mature: 56350
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTYARCIRGAHPPLLSLLSKGTNVSVKVETLVLFGATGDLAQRMLFPSLYNLHMDGLL CCCCHHHHHCCCCCHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH ADALTIVGSGRSAMDRDAFRAQVRAALTEYLPEDRIEAAVVDGFLARIDYCAIDAGAGTG HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCC YAELAALLGDRMARPIGVYLSTPPSMFGPIAQGLKAANIACAECRIAMEKPIGHDLASSR HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCEEHHHHHHHHCCCCCCCHHCCC EVNAQVGDAFAEDRVFRIDHYLGKETVQNLLALRFANMLFEPLWNAQAIDHVQITVAETV CCCHHHCCHHHHCCEEEHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHC GLEGRVSYYDGVGALKDMVQNHMLQLLAIIAMEPPASVGATAVRDEKVKLLRSLRKMTAE CCCCEEEHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DVKAHSVKGQYSSGAVNGAAVAGYADELGQPSNTETFVALKAFIDNWRWKGVPFYLRTGK HHHHHCCCCCCCCCCCCCCEEECCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCC RMPQRKSEVLIQFKPVPHNIFARVGAGKLDANMMIINLQPEENIRVKVMAKQPGLDRDGV CCCCCCCCEEEEEECCCHHHHHHCCCCEECCCEEEEEECCCCCCEEEEEEECCCCCCCCC KLKEVTMDVSLSHSFAGERRRIAYERLLLDFIEGDQTLFVRRDEVEAQWEWIDAIRDAWD EEEEEEEEEEECCHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHH QVDMTPQSYTAGSWGPSSAIALIERDGASWHD HCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MRLTYARCIRGAHPPLLSLLSKGTNVSVKVETLVLFGATGDLAQRMLFPSLYNLHMDGLL CCCCHHHHHCCCCCHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH ADALTIVGSGRSAMDRDAFRAQVRAALTEYLPEDRIEAAVVDGFLARIDYCAIDAGAGTG HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCC YAELAALLGDRMARPIGVYLSTPPSMFGPIAQGLKAANIACAECRIAMEKPIGHDLASSR HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCEEHHHHHHHHCCCCCCCHHCCC EVNAQVGDAFAEDRVFRIDHYLGKETVQNLLALRFANMLFEPLWNAQAIDHVQITVAETV CCCHHHCCHHHHCCEEEHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHC GLEGRVSYYDGVGALKDMVQNHMLQLLAIIAMEPPASVGATAVRDEKVKLLRSLRKMTAE CCCCEEEHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DVKAHSVKGQYSSGAVNGAAVAGYADELGQPSNTETFVALKAFIDNWRWKGVPFYLRTGK HHHHHCCCCCCCCCCCCCCEEECCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCC RMPQRKSEVLIQFKPVPHNIFARVGAGKLDANMMIINLQPEENIRVKVMAKQPGLDRDGV CCCCCCCCEEEEEECCCHHHHHHCCCCEECCCEEEEEECCCCCCEEEEEEECCCCCCCCC KLKEVTMDVSLSHSFAGERRRIAYERLLLDFIEGDQTLFVRRDEVEAQWEWIDAIRDAWD EEEEEEEEEEECCHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHH QVDMTPQSYTAGSWGPSSAIALIERDGASWHD HCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2254282 [H]