| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is ahcY
Identifier: 103485659
GI number: 103485659
Start: 163757
End: 165175
Strand: Reverse
Name: ahcY
Synonym: Sala_0163
Alternate gene names: 103485659
Gene position: 165175-163757 (Counterclockwise)
Preceding gene: 103485661
Following gene: 103485658
Centisome position: 4.94
GC content: 62.3
Gene sequence:
>1419_bases GTGGCCACTCTCGCCGCCGATACCCGCGATTATGTCGTTGCCGACATCGGCCTCGCCGATTTCGGGCGCAAGGAAATCAA CATCGCCGAAACCGAAATGCCGGGCCTGATGGCGCTACGCGCCGAATATGGCGCATCGCAGCCGCTGAAGGGTGCGCGCA TCACCGGGTCGCTGCACATGACCATCCAGACCGCGGTGCTGATCGAGACGCTGACCGCGCTTGGCGCCGAAGTGCGCTGG GCGACATGCAACATTTTCTCGACGCAGAACCATGCCGCCGCCGCGATCGCCGCGTCGGGCGTGCCGGTGTTCGCGGTGAA GGGCGAAAGCCTCGCCGATTATTGGGACTATGTCGGCCGCATTTTCGACTGGGAAAGCGACAATGACGGCCGGACCGCGA ACCTGATCCTCGACGATGGCGGCGACGCCACCATGTTCGCGCTGTGGGGCGCGAAGCTGGAGGCCGGCGAAACCATGCCG CCGCCCGAAAATGAGGAAGAGGTCGAGATGCAGCGCGCGCTGAAGGCGTTCATCGCCGCAAAACCCGGCTATCTCACCAA AACCGTCAAGGCGATCAAGGGCGTGTCGGAAGAAACGACCACCGGTGTCCACCGCCTCTATCACATCGCCAAGAAGGGCG AACTGCCCTTCCCCGCGATCAACGTCAACGACAGCGTCACCAAGTCGAAGTTCGACAATCTTTATGGCTGCAAGGAATCG CTCGTCGACGCGATCCGTCGCGGCACCGACGTGATGCTGGCGGGCAAGGTTGCGACAGTCGCCGGCTTCGGCGACGTCGG CAAGGGCAGCGCGCAAAGCCTGCGCAACGGCGGCGCGCGCGTCCTCGTCACCGAAATCGACCCGATCTGCGCGCTGCAGG CGGCGATGGAGGGTTTCGAGGTCGTGACGATGGACGAAGCCGTCAAGCGCTCGGACATCTTCGTCACCGCGACCGGCAAC GCCGACGTCATCACCGCCGAACATATGGCGGCGATGAAGAATATGGCGATCGTCTGCAACATCGGCCATTTCGACAGCGA GATCCAGATCGCGGCGCTCGCCAACTACAAGTGGACCGAAGTGAAGCCGCAGGTCGACCTGGTCGAGTTTCCCGACGGCA AGCAGATCATCATCCTGTCGAAGGGTCGCCTGGTCAATCTCGGCAATGCGACGGGCCATCCAAGCTTCGTGATGTCGGCG AGCTTCACCAACCAGACGCTCGCGCAGATCGAACTGTGGACGCGCAGCGAGCAGTATCAGAACGACGTCTATGTCCTGCC CAAGCATCTCGACGAAAAGGTCGCGGCGCTGCATCTGGAAAAGCTGGGCGTGAAGCTGACCAAGCTCACGCAGAAGCAGG CCGATTATATCGGCGTGCCGGTCGAGGGCCCGTTCAAGCCCGACCATTATCGTTATTGA
Upstream 100 bases:
>100_bases ATTTGATCGGCGGCGCGCTTTCGGCTAGGACGCGCAAGAAAATTACACAGTTTTCGTGGCCGCTCGCCTGCGGTCGTTCC TGCCATATATGGAGAATCCC
Downstream 100 bases:
>100_bases CCGTTTCGCCTGCGGCGAAGGCGGCATCGGCCCGCTTCCGCTTGACGGAACCGGGATAAAATGTGGACGGCGCGCCCATC GGACGATGCGGCGCGCCGAT
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MATLAADTRDYVVADIGLADFGRKEINIAETEMPGLMALRAEYGASQPLKGARITGSLHMTIQTAVLIETLTALGAEVRW ATCNIFSTQNHAAAAIAASGVPVFAVKGESLADYWDYVGRIFDWESDNDGRTANLILDDGGDATMFALWGAKLEAGETMP PPENEEEVEMQRALKAFIAAKPGYLTKTVKAIKGVSEETTTGVHRLYHIAKKGELPFPAINVNDSVTKSKFDNLYGCKES LVDAIRRGTDVMLAGKVATVAGFGDVGKGSAQSLRNGGARVLVTEIDPICALQAAMEGFEVVTMDEAVKRSDIFVTATGN ADVITAEHMAAMKNMAIVCNIGHFDSEIQIAALANYKWTEVKPQVDLVEFPDGKQIIILSKGRLVNLGNATGHPSFVMSA SFTNQTLAQIELWTRSEQYQNDVYVLPKHLDEKVAALHLEKLGVKLTKLTQKQADYIGVPVEGPFKPDHYRY
Sequences:
>Translated_472_residues MATLAADTRDYVVADIGLADFGRKEINIAETEMPGLMALRAEYGASQPLKGARITGSLHMTIQTAVLIETLTALGAEVRW ATCNIFSTQNHAAAAIAASGVPVFAVKGESLADYWDYVGRIFDWESDNDGRTANLILDDGGDATMFALWGAKLEAGETMP PPENEEEVEMQRALKAFIAAKPGYLTKTVKAIKGVSEETTTGVHRLYHIAKKGELPFPAINVNDSVTKSKFDNLYGCKES LVDAIRRGTDVMLAGKVATVAGFGDVGKGSAQSLRNGGARVLVTEIDPICALQAAMEGFEVVTMDEAVKRSDIFVTATGN ADVITAEHMAAMKNMAIVCNIGHFDSEIQIAALANYKWTEVKPQVDLVEFPDGKQIIILSKGRLVNLGNATGHPSFVMSA SFTNQTLAQIELWTRSEQYQNDVYVLPKHLDEKVAALHLEKLGVKLTKLTQKQADYIGVPVEGPFKPDHYRY >Mature_471_residues ATLAADTRDYVVADIGLADFGRKEINIAETEMPGLMALRAEYGASQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWA TCNIFSTQNHAAAAIAASGVPVFAVKGESLADYWDYVGRIFDWESDNDGRTANLILDDGGDATMFALWGAKLEAGETMPP PENEEEVEMQRALKAFIAAKPGYLTKTVKAIKGVSEETTTGVHRLYHIAKKGELPFPAINVNDSVTKSKFDNLYGCKESL VDAIRRGTDVMLAGKVATVAGFGDVGKGSAQSLRNGGARVLVTEIDPICALQAAMEGFEVVTMDEAVKRSDIFVTATGNA DVITAEHMAAMKNMAIVCNIGHFDSEIQIAALANYKWTEVKPQVDLVEFPDGKQIIILSKGRLVNLGNATGHPSFVMSAS FTNQTLAQIELWTRSEQYQNDVYVLPKHLDEKVAALHLEKLGVKLTKLTQKQADYIGVPVEGPFKPDHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family
Homologues:
Organism=Homo sapiens, GI9951915, Length=469, Percent_Identity=57.7825159914712, Blast_Score=512, Evalue=1e-145, Organism=Homo sapiens, GI239937451, Length=442, Percent_Identity=57.6923076923077, Blast_Score=483, Evalue=1e-136, Organism=Homo sapiens, GI298286489, Length=468, Percent_Identity=49.1452991452991, Blast_Score=451, Evalue=1e-127, Organism=Homo sapiens, GI195539337, Length=468, Percent_Identity=49.1452991452991, Blast_Score=450, Evalue=1e-126, Organism=Homo sapiens, GI24308043, Length=468, Percent_Identity=49.1452991452991, Blast_Score=450, Evalue=1e-126, Organism=Homo sapiens, GI195539349, Length=468, Percent_Identity=49.1452991452991, Blast_Score=450, Evalue=1e-126, Organism=Homo sapiens, GI21361647, Length=468, Percent_Identity=47.8632478632479, Blast_Score=429, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17506425, Length=467, Percent_Identity=59.7430406852248, Blast_Score=537, Evalue=1e-153, Organism=Saccharomyces cerevisiae, GI6320882, Length=486, Percent_Identity=57.201646090535, Blast_Score=506, Evalue=1e-144, Organism=Drosophila melanogaster, GI24642172, Length=464, Percent_Identity=61.8534482758621, Blast_Score=531, Evalue=1e-151, Organism=Drosophila melanogaster, GI24656245, Length=469, Percent_Identity=48.6140724946695, Blast_Score=444, Evalue=1e-125, Organism=Drosophila melanogaster, GI45553387, Length=466, Percent_Identity=48.7124463519313, Blast_Score=428, Evalue=1e-120, Organism=Drosophila melanogaster, GI45553385, Length=465, Percent_Identity=48.6021505376344, Blast_Score=426, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SAHH_SPHAL (Q1GWT5)
Other databases:
- EMBL: CP000356 - RefSeq: YP_615220.1 - ProteinModelPortal: Q1GWT5 - SMR: Q1GWT5 - GeneID: 4082921 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_0163 - NMPDR: fig|317655.9.peg.142 - HOGENOM: HBG352029 - OMA: VITHDHM - ProtClustDB: PRK05476 - BioCyc: SALA317655:SALA_0163-MONOMER - BRENDA: 3.3.1.1 - GO: GO:0005737 - GO: GO:0005488 - HAMAP: MF_00563 - InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 - PANTHER: PTHR23420 - PIRSF: PIRSF001109 - TIGRFAMs: TIGR00936
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD
EC number: =3.3.1.1
Molecular weight: Translated: 51174; Mature: 51043
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00738 ADOHCYASE_1; PS00739 ADOHCYASE_2
Important sites: BINDING 61-61 BINDING 139-139 BINDING 198-198 BINDING 228-228 BINDING 232-232 BINDING 233-233 BINDING 285-285 BINDING 320-320 BINDING 386-386
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLAADTRDYVVADIGLADFGRKEINIAETEMPGLMALRAEYGASQPLKGARITGSLHM CCCCCCCCCCEEEEECCHHHCCCCCCEEECCCCCCCEEEEHHCCCCCCCCCCEEEEEEEE TIQTAVLIETLTALGAEVRWATCNIFSTQNHAAAAIAASGVPVFAVKGESLADYWDYVGR EEHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEEECCCEEEEECCCHHHHHHHHHCE IFDWESDNDGRTANLILDDGGDATMFALWGAKLEAGETMPPPENEEEVEMQRALKAFIAA EECCCCCCCCCEEEEEEECCCCEEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHHHHC KPGYLTKTVKAIKGVSEETTTGVHRLYHIAKKGELPFPAINVNDSVTKSKFDNLYGCKES CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCHHHH LVDAIRRGTDVMLAGKVATVAGFGDVGKGSAQSLRNGGARVLVTEIDPICALQAAMEGFE HHHHHHCCCCEEEECCEEEEECCCCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHCCCE VVTMDEAVKRSDIFVTATGNADVITAEHMAAMKNMAIVCNIGHFDSEIQIAALANYKWTE EEEHHHHHCCCCEEEEECCCCCEEEHHHHHHHCCEEEEEEECCCCCCEEEEEECCCEEEE VKPQVDLVEFPDGKQIIILSKGRLVNLGNATGHPSFVMSASFTNQTLAQIELWTRSEQYQ CCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCEEEEECCCCCCEEEEEEEECCHHHC NDVYVLPKHLDEKVAALHLEKLGVKLTKLTQKQADYIGVPVEGPFKPDHYRY CCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure ATLAADTRDYVVADIGLADFGRKEINIAETEMPGLMALRAEYGASQPLKGARITGSLHM CCCCCCCCCEEEEECCHHHCCCCCCEEECCCCCCCEEEEHHCCCCCCCCCCEEEEEEEE TIQTAVLIETLTALGAEVRWATCNIFSTQNHAAAAIAASGVPVFAVKGESLADYWDYVGR EEHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEEECCCEEEEECCCHHHHHHHHHCE IFDWESDNDGRTANLILDDGGDATMFALWGAKLEAGETMPPPENEEEVEMQRALKAFIAA EECCCCCCCCCEEEEEEECCCCEEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHHHHC KPGYLTKTVKAIKGVSEETTTGVHRLYHIAKKGELPFPAINVNDSVTKSKFDNLYGCKES CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCHHHH LVDAIRRGTDVMLAGKVATVAGFGDVGKGSAQSLRNGGARVLVTEIDPICALQAAMEGFE HHHHHHCCCCEEEECCEEEEECCCCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHCCCE VVTMDEAVKRSDIFVTATGNADVITAEHMAAMKNMAIVCNIGHFDSEIQIAALANYKWTE EEEHHHHHCCCCEEEEECCCCCEEEHHHHHHHCCEEEEEEECCCCCCEEEEEECCCEEEE VKPQVDLVEFPDGKQIIILSKGRLVNLGNATGHPSFVMSASFTNQTLAQIELWTRSEQYQ CCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCEEEEECCCCCCEEEEEEEECCHHHC NDVYVLPKHLDEKVAALHLEKLGVKLTKLTQKQADYIGVPVEGPFKPDHYRY CCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA