| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485656
Identifier: 103485656
GI number: 103485656
Start: 159651
End: 160622
Strand: Reverse
Name: 103485656
Synonym: Sala_0160
Alternate gene names: NA
Gene position: 160622-159651 (Counterclockwise)
Preceding gene: 103485657
Following gene: 103485655
Centisome position: 4.8
GC content: 68.42
Gene sequence:
>972_bases ATGATTCCGCCCGCTCATGCGCCCGCCTTTCTCGCGGCGCACGGCTGGGACGATGCCCGGATTTTACCGCTCGCGGGCGA CGCATCCTTCCGCCGCTATTTCCGGGTCGTCGATGGCGAACGACGCGCGGTGCTGATGGACGCGCCGCCGCCGCACGAAG ACCCGCGGCCTTTCATCGCGGTCGCCGAATATCTGTGTGAGGCGGGACTCAACGCGCCGACGATCCTCGCGCGCGATCTG GAACGCGGGCTGCTGTTGATCGAGGATTTCGGCGATGTGCGGCTGCGCGAGACCGTCGATGCCGCGCCCGACCGCGAAAC CGCCCATTACAGCGGGCTCACCGACCTGCTGATCCATCTCCACGCGCAGCCGCCGATGCCGGGGCTGCCCGTGCATGGGC TGGAGCAATGGCTGGGCGAGGTGATGCTGTTCACCGACTGGTATTGCCCGGCGCTGGACATCGCCGTCGATCGCGACAGC TTTCGCGCCGCGTGGGAAGCCGCGCTGACCCCGGTGGAGAGCGACGGCCTGCCGCGCGTCACCGTGCTGCGCGATTTCCA CGCCGAAAACATCATGCTCGTTGCGGGGCAGGACGGCATCGCGCATTACGGCCTGCTCGATTTTCAGGACGCGCTGGTCG GGCACCCCGCCTATGACCTCGCCTCGGTGCTGGAGGATGCAAGGCGCGACGTCAGCCCGGCGGTCGAGGCGGCGATGCTC GCGCGTTATCGGCAAGCGACCGGGCGCGATATCGAGAACGCCTATTGGGCGCTCGCGGCGCAGCGCAACACGCGCATTCT CGGCGTGTTCGTCCGCCTGTGGAAACGCGACAACAAGCCGCATTACCGCCAGTTCCAGCCGCGCATGTGGGGCCTGCTCG AACGCGACCTCGCGCATCCGGCGCTGGTCCCCGTCCGGCAATGGTTCGACGCGCATATCCCCGCGGCGAAGCGGGCGGAG GCGTGGGCGTGA
Upstream 100 bases:
>100_bases GCTGGCCGGGTGCGCTCGAACTGACGATTTCGGGCGCGGGCGATGCGCGTGTCTTGACAGCGAGAGTGCCGCCCGCTTGG GAGGCGCGATGGCCGCTTCC
Downstream 100 bases:
>100_bases GTGCGACGATCGAAAGCGCGATGGTGATGGCGGCGGGACTCGGCAAGCGGATGCGGCCCTTGACCGCGACGCGGCCCAAG CCGCTGGTGCGCATCGCGGG
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Related Ser/Thr Protein Kinase; Phosphotransferase Family; Chlorosome Protein; Phosphotransferase Family Protein; .5 Kda Chlorosome Protein; Bifunctional ATPase/Phosphotransferase; P-Loop Hydrolase; Putatuive Aminoglycoside Phosphotransferase; Ser/Thr Kinase-Like Phosphotransferase; ATPase; Serine/Threonine Protein Kinase; P-Loop Hydrolase/Phosphotransferase; Phosphotransferase Protein; Conserved Phosphotransferase
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MIPPAHAPAFLAAHGWDDARILPLAGDASFRRYFRVVDGERRAVLMDAPPPHEDPRPFIAVAEYLCEAGLNAPTILARDL ERGLLLIEDFGDVRLRETVDAAPDRETAHYSGLTDLLIHLHAQPPMPGLPVHGLEQWLGEVMLFTDWYCPALDIAVDRDS FRAAWEAALTPVESDGLPRVTVLRDFHAENIMLVAGQDGIAHYGLLDFQDALVGHPAYDLASVLEDARRDVSPAVEAAML ARYRQATGRDIENAYWALAAQRNTRILGVFVRLWKRDNKPHYRQFQPRMWGLLERDLAHPALVPVRQWFDAHIPAAKRAE AWA
Sequences:
>Translated_323_residues MIPPAHAPAFLAAHGWDDARILPLAGDASFRRYFRVVDGERRAVLMDAPPPHEDPRPFIAVAEYLCEAGLNAPTILARDL ERGLLLIEDFGDVRLRETVDAAPDRETAHYSGLTDLLIHLHAQPPMPGLPVHGLEQWLGEVMLFTDWYCPALDIAVDRDS FRAAWEAALTPVESDGLPRVTVLRDFHAENIMLVAGQDGIAHYGLLDFQDALVGHPAYDLASVLEDARRDVSPAVEAAML ARYRQATGRDIENAYWALAAQRNTRILGVFVRLWKRDNKPHYRQFQPRMWGLLERDLAHPALVPVRQWFDAHIPAAKRAE AWA >Mature_323_residues MIPPAHAPAFLAAHGWDDARILPLAGDASFRRYFRVVDGERRAVLMDAPPPHEDPRPFIAVAEYLCEAGLNAPTILARDL ERGLLLIEDFGDVRLRETVDAAPDRETAHYSGLTDLLIHLHAQPPMPGLPVHGLEQWLGEVMLFTDWYCPALDIAVDRDS FRAAWEAALTPVESDGLPRVTVLRDFHAENIMLVAGQDGIAHYGLLDFQDALVGHPAYDLASVLEDARRDVSPAVEAAML ARYRQATGRDIENAYWALAAQRNTRILGVFVRLWKRDNKPHYRQFQPRMWGLLERDLAHPALVPVRQWFDAHIPAAKRAE AWA
Specific function: Unknown
COG id: COG3178
COG function: function code R; Predicted phosphotransferase related to Ser/Thr protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36287; Mature: 36287
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPPAHAPAFLAAHGWDDARILPLAGDASFRRYFRVVDGERRAVLMDAPPPHEDPRPFIA CCCCCCCCCEEEECCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHH VAEYLCEAGLNAPTILARDLERGLLLIEDFGDVRLRETVDAAPDRETAHYSGLTDLLIHL HHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCCHHHHCCHHHHHHHH HAQPPMPGLPVHGLEQWLGEVMLFTDWYCPALDIAVDRDSFRAAWEAALTPVESDGLPRV CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCEE TVLRDFHAENIMLVAGQDGIAHYGLLDFQDALVGHPAYDLASVLEDARRDVSPAVEAAML EEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHH ARYRQATGRDIENAYWALAAQRNTRILGVFVRLWKRDNKPHYRQFQPRMWGLLERDLAHP HHHHHHCCCCHHHHHEEEECCCCCHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHCCC ALVPVRQWFDAHIPAAKRAEAWA HHHHHHHHHHCCCCCHHHHCCCC >Mature Secondary Structure MIPPAHAPAFLAAHGWDDARILPLAGDASFRRYFRVVDGERRAVLMDAPPPHEDPRPFIA CCCCCCCCCEEEECCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHH VAEYLCEAGLNAPTILARDLERGLLLIEDFGDVRLRETVDAAPDRETAHYSGLTDLLIHL HHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCCHHHHCCHHHHHHHH HAQPPMPGLPVHGLEQWLGEVMLFTDWYCPALDIAVDRDSFRAAWEAALTPVESDGLPRV CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCEE TVLRDFHAENIMLVAGQDGIAHYGLLDFQDALVGHPAYDLASVLEDARRDVSPAVEAAML EEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHH ARYRQATGRDIENAYWALAAQRNTRILGVFVRLWKRDNKPHYRQFQPRMWGLLERDLAHP HHHHHHCCCCHHHHHEEEECCCCCHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHCCC ALVPVRQWFDAHIPAAKRAEAWA HHHHHHHHHHCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA