| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485640
Identifier: 103485640
GI number: 103485640
Start: 139264
End: 140049
Strand: Reverse
Name: 103485640
Synonym: Sala_0144
Alternate gene names: NA
Gene position: 140049-139264 (Counterclockwise)
Preceding gene: 103485641
Following gene: 103485634
Centisome position: 4.19
GC content: 53.44
Gene sequence:
>786_bases ATGAAAATTTGGCCAAAGCCGCAGGATGTACTGCTCGATCAGTATTATACGTGTCAACAAGTCGCACGAAAACTATATGG CGTGTTCCAGGAGTATTTTGATCCGAACCAATATCAGCTAGTCGAGCCGAGCGCTGGCACCGGATCGTTTTTCAGACTGA TGCCCCATGAGAGCCTCGCGTTTGATGTTGATCCAAAATATCCGGGTATCCGCACAGCTGATTTCCTATGCGTTGAAATC CGCAGCGAACGAGAGGTGGCTGTGATCGGCAATCCGCCGTTCGGCCGGAATGCCAGTATAGCAGTGCGCTTCTTCAACCA TGCTGCGTGCCAGGCGAGTGTCATCGCACTCATACTGCCGAGATCAATTCGGAAGGCCTCCATAGAAAATCGCCTTGATC GTAACTTCCATCTAATCCACGAGGAGACTGTGCAGCGTGACGCGTTCCTATTCAGGTCCAAGCCGTACGATGTACCGGCT GTATTCCAAATCTGGGAGCGTCGCGATGACCTGCGAGAGTTGCAACATGTCGCATTCCACCATCGGGATTGGAGTTGGAC GACGCCAGAACGAGCCGACTTCGCGATACAGCGCGTCGGTGCGCGAGCAGGTCGCGTGCACCGAGACCTCACGCGGAGTC CGTCTTCCCACTATTTCATTCGAGGTAATGTGGAGCCAATAATGAAACGGCTCAACTTCGCCAAGGTCGCGCTCAACGTG GCGGGCAATCCGAGCTTATCAAAGTCGGAAATCGTGTCACTCTATCGCCAATTGACCGGGAGGTAA
Upstream 100 bases:
>100_bases TTCTGAGTAGCTTGGGATGACATTGCGACGATCCTATAACTCAGGGTCGGCGAAATAATCACGTCCGACGAGATGGAATA TTGTCTCCAAGGAGTGAAAA
Downstream 100 bases:
>100_bases GCATTCGCCCGAAAAGCCATCATCTGAGATCTCCGCTTCCTTGGATACACTGGCTCCGCGACGTCGCACGGTTCGAATTT AAAGAATGCCGTGTTTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Type II R-M System Methyltransferase; Methyltransferase
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKIWPKPQDVLLDQYYTCQQVARKLYGVFQEYFDPNQYQLVEPSAGTGSFFRLMPHESLAFDVDPKYPGIRTADFLCVEI RSEREVAVIGNPPFGRNASIAVRFFNHAACQASVIALILPRSIRKASIENRLDRNFHLIHEETVQRDAFLFRSKPYDVPA VFQIWERRDDLRELQHVAFHHRDWSWTTPERADFAIQRVGARAGRVHRDLTRSPSSHYFIRGNVEPIMKRLNFAKVALNV AGNPSLSKSEIVSLYRQLTGR
Sequences:
>Translated_261_residues MKIWPKPQDVLLDQYYTCQQVARKLYGVFQEYFDPNQYQLVEPSAGTGSFFRLMPHESLAFDVDPKYPGIRTADFLCVEI RSEREVAVIGNPPFGRNASIAVRFFNHAACQASVIALILPRSIRKASIENRLDRNFHLIHEETVQRDAFLFRSKPYDVPA VFQIWERRDDLRELQHVAFHHRDWSWTTPERADFAIQRVGARAGRVHRDLTRSPSSHYFIRGNVEPIMKRLNFAKVALNV AGNPSLSKSEIVSLYRQLTGR >Mature_261_residues MKIWPKPQDVLLDQYYTCQQVARKLYGVFQEYFDPNQYQLVEPSAGTGSFFRLMPHESLAFDVDPKYPGIRTADFLCVEI RSEREVAVIGNPPFGRNASIAVRFFNHAACQASVIALILPRSIRKASIENRLDRNFHLIHEETVQRDAFLFRSKPYDVPA VFQIWERRDDLRELQHVAFHHRDWSWTTPERADFAIQRVGARAGRVHRDLTRSPSSHYFIRGNVEPIMKRLNFAKVALNV AGNPSLSKSEIVSLYRQLTGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30245; Mature: 30245
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIWPKPQDVLLDQYYTCQQVARKLYGVFQEYFDPNQYQLVEPSAGTGSFFRLMPHESLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCCCEE FDVDPKYPGIRTADFLCVEIRSEREVAVIGNPPFGRNASIAVRFFNHAACQASVIALILP EECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH RSIRKASIENRLDRNFHLIHEETVQRDAFLFRSKPYDVPAVFQIWERRDDLRELQHVAFH HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HRDWSWTTPERADFAIQRVGARAGRVHRDLTRSPSSHYFIRGNVEPIMKRLNFAKVALNV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHEEEEE AGNPSLSKSEIVSLYRQLTGR CCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKIWPKPQDVLLDQYYTCQQVARKLYGVFQEYFDPNQYQLVEPSAGTGSFFRLMPHESLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCCCEE FDVDPKYPGIRTADFLCVEIRSEREVAVIGNPPFGRNASIAVRFFNHAACQASVIALILP EECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH RSIRKASIENRLDRNFHLIHEETVQRDAFLFRSKPYDVPAVFQIWERRDDLRELQHVAFH HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HRDWSWTTPERADFAIQRVGARAGRVHRDLTRSPSSHYFIRGNVEPIMKRLNFAKVALNV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHEEEEE AGNPSLSKSEIVSLYRQLTGR CCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA