Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485640

Identifier: 103485640

GI number: 103485640

Start: 139264

End: 140049

Strand: Reverse

Name: 103485640

Synonym: Sala_0144

Alternate gene names: NA

Gene position: 140049-139264 (Counterclockwise)

Preceding gene: 103485641

Following gene: 103485634

Centisome position: 4.19

GC content: 53.44

Gene sequence:

>786_bases
ATGAAAATTTGGCCAAAGCCGCAGGATGTACTGCTCGATCAGTATTATACGTGTCAACAAGTCGCACGAAAACTATATGG
CGTGTTCCAGGAGTATTTTGATCCGAACCAATATCAGCTAGTCGAGCCGAGCGCTGGCACCGGATCGTTTTTCAGACTGA
TGCCCCATGAGAGCCTCGCGTTTGATGTTGATCCAAAATATCCGGGTATCCGCACAGCTGATTTCCTATGCGTTGAAATC
CGCAGCGAACGAGAGGTGGCTGTGATCGGCAATCCGCCGTTCGGCCGGAATGCCAGTATAGCAGTGCGCTTCTTCAACCA
TGCTGCGTGCCAGGCGAGTGTCATCGCACTCATACTGCCGAGATCAATTCGGAAGGCCTCCATAGAAAATCGCCTTGATC
GTAACTTCCATCTAATCCACGAGGAGACTGTGCAGCGTGACGCGTTCCTATTCAGGTCCAAGCCGTACGATGTACCGGCT
GTATTCCAAATCTGGGAGCGTCGCGATGACCTGCGAGAGTTGCAACATGTCGCATTCCACCATCGGGATTGGAGTTGGAC
GACGCCAGAACGAGCCGACTTCGCGATACAGCGCGTCGGTGCGCGAGCAGGTCGCGTGCACCGAGACCTCACGCGGAGTC
CGTCTTCCCACTATTTCATTCGAGGTAATGTGGAGCCAATAATGAAACGGCTCAACTTCGCCAAGGTCGCGCTCAACGTG
GCGGGCAATCCGAGCTTATCAAAGTCGGAAATCGTGTCACTCTATCGCCAATTGACCGGGAGGTAA

Upstream 100 bases:

>100_bases
TTCTGAGTAGCTTGGGATGACATTGCGACGATCCTATAACTCAGGGTCGGCGAAATAATCACGTCCGACGAGATGGAATA
TTGTCTCCAAGGAGTGAAAA

Downstream 100 bases:

>100_bases
GCATTCGCCCGAAAAGCCATCATCTGAGATCTCCGCTTCCTTGGATACACTGGCTCCGCGACGTCGCACGGTTCGAATTT
AAAGAATGCCGTGTTTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Type II R-M System Methyltransferase; Methyltransferase

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKIWPKPQDVLLDQYYTCQQVARKLYGVFQEYFDPNQYQLVEPSAGTGSFFRLMPHESLAFDVDPKYPGIRTADFLCVEI
RSEREVAVIGNPPFGRNASIAVRFFNHAACQASVIALILPRSIRKASIENRLDRNFHLIHEETVQRDAFLFRSKPYDVPA
VFQIWERRDDLRELQHVAFHHRDWSWTTPERADFAIQRVGARAGRVHRDLTRSPSSHYFIRGNVEPIMKRLNFAKVALNV
AGNPSLSKSEIVSLYRQLTGR

Sequences:

>Translated_261_residues
MKIWPKPQDVLLDQYYTCQQVARKLYGVFQEYFDPNQYQLVEPSAGTGSFFRLMPHESLAFDVDPKYPGIRTADFLCVEI
RSEREVAVIGNPPFGRNASIAVRFFNHAACQASVIALILPRSIRKASIENRLDRNFHLIHEETVQRDAFLFRSKPYDVPA
VFQIWERRDDLRELQHVAFHHRDWSWTTPERADFAIQRVGARAGRVHRDLTRSPSSHYFIRGNVEPIMKRLNFAKVALNV
AGNPSLSKSEIVSLYRQLTGR
>Mature_261_residues
MKIWPKPQDVLLDQYYTCQQVARKLYGVFQEYFDPNQYQLVEPSAGTGSFFRLMPHESLAFDVDPKYPGIRTADFLCVEI
RSEREVAVIGNPPFGRNASIAVRFFNHAACQASVIALILPRSIRKASIENRLDRNFHLIHEETVQRDAFLFRSKPYDVPA
VFQIWERRDDLRELQHVAFHHRDWSWTTPERADFAIQRVGARAGRVHRDLTRSPSSHYFIRGNVEPIMKRLNFAKVALNV
AGNPSLSKSEIVSLYRQLTGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30245; Mature: 30245

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIWPKPQDVLLDQYYTCQQVARKLYGVFQEYFDPNQYQLVEPSAGTGSFFRLMPHESLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCCCEE
FDVDPKYPGIRTADFLCVEIRSEREVAVIGNPPFGRNASIAVRFFNHAACQASVIALILP
EECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH
RSIRKASIENRLDRNFHLIHEETVQRDAFLFRSKPYDVPAVFQIWERRDDLRELQHVAFH
HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
HRDWSWTTPERADFAIQRVGARAGRVHRDLTRSPSSHYFIRGNVEPIMKRLNFAKVALNV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHEEEEE
AGNPSLSKSEIVSLYRQLTGR
CCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIWPKPQDVLLDQYYTCQQVARKLYGVFQEYFDPNQYQLVEPSAGTGSFFRLMPHESLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCCCEE
FDVDPKYPGIRTADFLCVEIRSEREVAVIGNPPFGRNASIAVRFFNHAACQASVIALILP
EECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH
RSIRKASIENRLDRNFHLIHEETVQRDAFLFRSKPYDVPAVFQIWERRDDLRELQHVAFH
HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
HRDWSWTTPERADFAIQRVGARAGRVHRDLTRSPSSHYFIRGNVEPIMKRLNFAKVALNV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHEEEEE
AGNPSLSKSEIVSLYRQLTGR
CCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA