Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485628

Identifier: 103485628

GI number: 103485628

Start: 126795

End: 127478

Strand: Reverse

Name: 103485628

Synonym: Sala_0132

Alternate gene names: NA

Gene position: 127478-126795 (Counterclockwise)

Preceding gene: 103485630

Following gene: 103485627

Centisome position: 3.81

GC content: 57.31

Gene sequence:

>684_bases
GTGACTCCAGTCTATAATCAATCGTTTTTGAGCGTCGCGAGTGCGGCTTTCCTGCTATCGACACTTTCGGCTTGCGGCGG
CGCATCAGGGGAAGGCGAGAAATCCGACAGTGCGGAACCGCGAACGCAAGCGGCCGTCGCTCGCGACCCCAATTATCCCG
AGATCGATATCCCGCCCGTTTGGGATGCCAAAGGACAGCTGGTCCAACCAAAAGACTTTCGCGAGTTGGTCTTCCTCGGG
GCGCCGCTGACACCGCACGGTCTTAACGGCGGGAAAGCGTCTTTTCCCGAGTTCCACAATGTCTACACGCAGCCAGCAGC
CTTCAAGGCCTATCGGGCGACCGGCAAATGGCCTGAAGGCACCATGATGATCAAGGAACTACAGCTCGTCAGTGATCCGA
AAGGCGAATTTCCTGACGGATCAACGACGGCACCATCCGGGCGAGGATATTTTCCCGGTCCGCCCAATGGCCTCGACGTT
TCAGTCAAGGACAGCAAACGGTTCGCCGATTCAAATGGCTGGGGCTATTTCAACTTCAATCATTCCGCTCCGCCCTATCT
GGCCACGGCAGCGCTCAAATCCGTCGACGAATGCGCGGGGTGCCACATCGCCAATGCAGAAGACATGGTCTACATCAAAT
TCTACAAGCCCATACTCGATCCGCTACCGCTCCCCCGCGGTTGA

Upstream 100 bases:

>100_bases
TTCAAACTATTGAAACTATACCGACCGGCTATTGGACATCTCTCCCACGATGCTGGATGATCAGATACCATATATTGATT
TCAAGAAGAGGACGGGTGCC

Downstream 100 bases:

>100_bases
CATGACGCTGCTGCAGCCATCGGCGTCTGCGGCGCGACAGGCGATGCAAGAGCAGCGGCCATGCTCAGTGCTCATAGGAA
CGACGATTTGCTGACCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome P; Chain A Cytochrome P

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTPVYNQSFLSVASAAFLLSTLSACGGASGEGEKSDSAEPRTQAAVARDPNYPEIDIPPVWDAKGQLVQPKDFRELVFLG
APLTPHGLNGGKASFPEFHNVYTQPAAFKAYRATGKWPEGTMMIKELQLVSDPKGEFPDGSTTAPSGRGYFPGPPNGLDV
SVKDSKRFADSNGWGYFNFNHSAPPYLATAALKSVDECAGCHIANAEDMVYIKFYKPILDPLPLPRG

Sequences:

>Translated_227_residues
MTPVYNQSFLSVASAAFLLSTLSACGGASGEGEKSDSAEPRTQAAVARDPNYPEIDIPPVWDAKGQLVQPKDFRELVFLG
APLTPHGLNGGKASFPEFHNVYTQPAAFKAYRATGKWPEGTMMIKELQLVSDPKGEFPDGSTTAPSGRGYFPGPPNGLDV
SVKDSKRFADSNGWGYFNFNHSAPPYLATAALKSVDECAGCHIANAEDMVYIKFYKPILDPLPLPRG
>Mature_226_residues
TPVYNQSFLSVASAAFLLSTLSACGGASGEGEKSDSAEPRTQAAVARDPNYPEIDIPPVWDAKGQLVQPKDFRELVFLGA
PLTPHGLNGGKASFPEFHNVYTQPAAFKAYRATGKWPEGTMMIKELQLVSDPKGEFPDGSTTAPSGRGYFPGPPNGLDVS
VKDSKRFADSNGWGYFNFNHSAPPYLATAALKSVDECAGCHIANAEDMVYIKFYKPILDPLPLPRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24403; Mature: 24271

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPVYNQSFLSVASAAFLLSTLSACGGASGEGEKSDSAEPRTQAAVARDPNYPEIDIPPV
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
WDAKGQLVQPKDFRELVFLGAPLTPHGLNGGKASFPEFHNVYTQPAAFKAYRATGKWPEG
CCCCCCEECCHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCC
TMMIKELQLVSDPKGEFPDGSTTAPSGRGYFPGPPNGLDVSVKDSKRFADSNGWGYFNFN
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEC
HSAPPYLATAALKSVDECAGCHIANAEDMVYIKFYKPILDPLPLPRG
CCCCCHHHHHHHHHHHHHHCCEECCCCCEEEEEEEHHHHCCCCCCCC
>Mature Secondary Structure 
TPVYNQSFLSVASAAFLLSTLSACGGASGEGEKSDSAEPRTQAAVARDPNYPEIDIPPV
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
WDAKGQLVQPKDFRELVFLGAPLTPHGLNGGKASFPEFHNVYTQPAAFKAYRATGKWPEG
CCCCCCEECCHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCC
TMMIKELQLVSDPKGEFPDGSTTAPSGRGYFPGPPNGLDVSVKDSKRFADSNGWGYFNFN
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEC
HSAPPYLATAALKSVDECAGCHIANAEDMVYIKFYKPILDPLPLPRG
CCCCCHHHHHHHHHHHHHHCCEECCCCCEEEEEEEHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA