| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485599
Identifier: 103485599
GI number: 103485599
Start: 103680
End: 103928
Strand: Reverse
Name: 103485599
Synonym: Sala_0102
Alternate gene names: NA
Gene position: 103928-103680 (Counterclockwise)
Preceding gene: 103485600
Following gene: 103485598
Centisome position: 3.11
GC content: 62.65
Gene sequence:
>249_bases GTGCGGCCTTGGCTCTTCCTGACCGCCAGCCACCTCGCAATGCTCGGCATTGGTTTTGCGGCCGGCATTTACACGCTGCC AATCCTCACCGCGGCCAGGCCGCCGAAGCCGGCAGCCTATCAGGCCATCGTCGACGTGCCTGTCGGGATCGATGTTCGCG ACTACAACACGGTCGTCATCTGGTGCGAAGCGTTCGACCAGTTCATCAGCGCGGCAGCGTATCGACCGTCGCGTCAGGCG CTAAAATGA
Upstream 100 bases:
>100_bases GCCCTGGTTCTCGATCATTGACGCTGGCGGCCGTATCGTCTTCTCGGACTTCCATCTCGACGCGGACAGGATCGTAAAGG ATCTGGAGCTGGTGTAATCC
Downstream 100 bases:
>100_bases GCCCGGCGATGGATAGCATGCGGTCGGCGGGCCGACGTGGCCTCAAGCTCGCACCGGTGGCGGCGTTGCTGGCGAGCGTC GCGGCTCTGCTGCTGGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MRPWLFLTASHLAMLGIGFAAGIYTLPILTAARPPKPAAYQAIVDVPVGIDVRDYNTVVIWCEAFDQFISAAAYRPSRQA LK
Sequences:
>Translated_82_residues MRPWLFLTASHLAMLGIGFAAGIYTLPILTAARPPKPAAYQAIVDVPVGIDVRDYNTVVIWCEAFDQFISAAAYRPSRQA LK >Mature_82_residues MRPWLFLTASHLAMLGIGFAAGIYTLPILTAARPPKPAAYQAIVDVPVGIDVRDYNTVVIWCEAFDQFISAAAYRPSRQA LK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9008; Mature: 9008
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPWLFLTASHLAMLGIGFAAGIYTLPILTAARPPKPAAYQAIVDVPVGIDVRDYNTVVI CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEECCCEEEE WCEAFDQFISAAAYRPSRQALK EHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRPWLFLTASHLAMLGIGFAAGIYTLPILTAARPPKPAAYQAIVDVPVGIDVRDYNTVVI CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEECCCEEEE WCEAFDQFISAAAYRPSRQALK EHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA