| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is yesE [H]
Identifier: 103485590
GI number: 103485590
Start: 95423
End: 95848
Strand: Direct
Name: yesE [H]
Synonym: Sala_0092
Alternate gene names: 103485590
Gene position: 95423-95848 (Clockwise)
Preceding gene: 103485588
Following gene: 103485591
Centisome position: 2.85
GC content: 59.39
Gene sequence:
>426_bases ATGCTTCGAAAGGCATTGGGTGATCGTCTCGCTCCCGATGCTGCCACCTTTCTCGACATGGTGGCTGAAAATGGGGTGAT GGAATTTCCTTATTCGCCGCCAGGCCTTCCGACCCGGTTGGTTGGAAAGGCTGCTATCGCGCGTCACCTTGAAAGCCTTG GTGACATGATAGCCTTCGACCGCATGGGTGAGCCGACCATTCACGCCACGACCGACCCCGATGTTACCATTGTCGAGTTC GAAGGCTTCGGAAGCGGCGTTGCGACCGGGGAATCCTATGACCAACGCTACATATCCGTGATCCGGACGGACGCCGGGCG GATTATGCACTATCGCGATTACTGGAACCCGCTGGTGGCGCTGCGCGCGCTTCGCGGCAGCGCGGTTGTCGATGCCCTTG TCGGCGGAGCGTCAGACCATGGTTGA
Upstream 100 bases:
>100_bases TTGTGTTCCATCGATGCCTTCCTATATATCTCAGCGGAACGCTACCGTTCCAACCGATTGGGATTAGTTCATGACAGACA GTGTGGAAAGCTTTTCAGCG
Downstream 100 bases:
>100_bases TCGGGTCTTGGTGACTGGGGGCACGGGCAAGACGGGCGCGCTGGTTGCGCAGCAGCTTACGGCACGCGGTGTCGAACCCC GCATCGCAACCCGCAACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MLRKALGDRLAPDAATFLDMVAENGVMEFPYSPPGLPTRLVGKAAIARHLESLGDMIAFDRMGEPTIHATTDPDVTIVEF EGFGSGVATGESYDQRYISVIRTDAGRIMHYRDYWNPLVALRALRGSAVVDALVGGASDHG
Sequences:
>Translated_141_residues MLRKALGDRLAPDAATFLDMVAENGVMEFPYSPPGLPTRLVGKAAIARHLESLGDMIAFDRMGEPTIHATTDPDVTIVEF EGFGSGVATGESYDQRYISVIRTDAGRIMHYRDYWNPLVALRALRGSAVVDALVGGASDHG >Mature_141_residues MLRKALGDRLAPDAATFLDMVAENGVMEFPYSPPGLPTRLVGKAAIARHLESLGDMIAFDRMGEPTIHATTDPDVTIVEF EGFGSGVATGESYDQRYISVIRTDAGRIMHYRDYWNPLVALRALRGSAVVDALVGGASDHG
Specific function: Unknown
COG id: COG3631
COG function: function code R; Ketosteroid isomerase-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the limonene-1,2-epoxide hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013100 [H]
Pfam domain/function: PF07858 LEH [H]
EC number: NA
Molecular weight: Translated: 15207; Mature: 15207
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKALGDRLAPDAATFLDMVAENGVMEFPYSPPGLPTRLVGKAAIARHLESLGDMIAFD CCHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RMGEPTIHATTDPDVTIVEFEGFGSGVATGESYDQRYISVIRTDAGRIMHYRDYWNPLVA CCCCCEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHH LRALRGSAVVDALVGGASDHG HHHHCCHHHHHHHHCCCCCCC >Mature Secondary Structure MLRKALGDRLAPDAATFLDMVAENGVMEFPYSPPGLPTRLVGKAAIARHLESLGDMIAFD CCHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RMGEPTIHATTDPDVTIVEFEGFGSGVATGESYDQRYISVIRTDAGRIMHYRDYWNPLVA CCCCCEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHH LRALRGSAVVDALVGGASDHG HHHHCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]