Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yesE [H]

Identifier: 103485590

GI number: 103485590

Start: 95423

End: 95848

Strand: Direct

Name: yesE [H]

Synonym: Sala_0092

Alternate gene names: 103485590

Gene position: 95423-95848 (Clockwise)

Preceding gene: 103485588

Following gene: 103485591

Centisome position: 2.85

GC content: 59.39

Gene sequence:

>426_bases
ATGCTTCGAAAGGCATTGGGTGATCGTCTCGCTCCCGATGCTGCCACCTTTCTCGACATGGTGGCTGAAAATGGGGTGAT
GGAATTTCCTTATTCGCCGCCAGGCCTTCCGACCCGGTTGGTTGGAAAGGCTGCTATCGCGCGTCACCTTGAAAGCCTTG
GTGACATGATAGCCTTCGACCGCATGGGTGAGCCGACCATTCACGCCACGACCGACCCCGATGTTACCATTGTCGAGTTC
GAAGGCTTCGGAAGCGGCGTTGCGACCGGGGAATCCTATGACCAACGCTACATATCCGTGATCCGGACGGACGCCGGGCG
GATTATGCACTATCGCGATTACTGGAACCCGCTGGTGGCGCTGCGCGCGCTTCGCGGCAGCGCGGTTGTCGATGCCCTTG
TCGGCGGAGCGTCAGACCATGGTTGA

Upstream 100 bases:

>100_bases
TTGTGTTCCATCGATGCCTTCCTATATATCTCAGCGGAACGCTACCGTTCCAACCGATTGGGATTAGTTCATGACAGACA
GTGTGGAAAGCTTTTCAGCG

Downstream 100 bases:

>100_bases
TCGGGTCTTGGTGACTGGGGGCACGGGCAAGACGGGCGCGCTGGTTGCGCAGCAGCTTACGGCACGCGGTGTCGAACCCC
GCATCGCAACCCGCAACGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MLRKALGDRLAPDAATFLDMVAENGVMEFPYSPPGLPTRLVGKAAIARHLESLGDMIAFDRMGEPTIHATTDPDVTIVEF
EGFGSGVATGESYDQRYISVIRTDAGRIMHYRDYWNPLVALRALRGSAVVDALVGGASDHG

Sequences:

>Translated_141_residues
MLRKALGDRLAPDAATFLDMVAENGVMEFPYSPPGLPTRLVGKAAIARHLESLGDMIAFDRMGEPTIHATTDPDVTIVEF
EGFGSGVATGESYDQRYISVIRTDAGRIMHYRDYWNPLVALRALRGSAVVDALVGGASDHG
>Mature_141_residues
MLRKALGDRLAPDAATFLDMVAENGVMEFPYSPPGLPTRLVGKAAIARHLESLGDMIAFDRMGEPTIHATTDPDVTIVEF
EGFGSGVATGESYDQRYISVIRTDAGRIMHYRDYWNPLVALRALRGSAVVDALVGGASDHG

Specific function: Unknown

COG id: COG3631

COG function: function code R; Ketosteroid isomerase-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the limonene-1,2-epoxide hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013100 [H]

Pfam domain/function: PF07858 LEH [H]

EC number: NA

Molecular weight: Translated: 15207; Mature: 15207

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKALGDRLAPDAATFLDMVAENGVMEFPYSPPGLPTRLVGKAAIARHLESLGDMIAFD
CCHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RMGEPTIHATTDPDVTIVEFEGFGSGVATGESYDQRYISVIRTDAGRIMHYRDYWNPLVA
CCCCCEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHH
LRALRGSAVVDALVGGASDHG
HHHHCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLRKALGDRLAPDAATFLDMVAENGVMEFPYSPPGLPTRLVGKAAIARHLESLGDMIAFD
CCHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RMGEPTIHATTDPDVTIVEFEGFGSGVATGESYDQRYISVIRTDAGRIMHYRDYWNPLVA
CCCCCEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHH
LRALRGSAVVDALVGGASDHG
HHHHCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]