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The map label for this gene is 103485589

Identifier: 103485589

GI number: 103485589

Start: 94707

End: 95270

Strand: Reverse

Name: 103485589

Synonym: Sala_0091

Alternate gene names: NA

Gene position: 95270-94707 (Counterclockwise)

Preceding gene: 103485598

Following gene: 103485586

Centisome position: 2.85

GC content: 63.48

Gene sequence:

>564_bases
ATGCGTGCTGACGTAACGAATGCACTGACGCGCAGCTTCTTCGAAGAATGGGCAAGGACTGGCTATGCGGGTCTGAGCCT
CGAACGGGTGGCGCGAACTGCAGGGGTCGGCAAGGCTGCGCTTTACCGCCGCTGGCCGGACAAGGTGTCGATGGCCAGCG
ATTTGCTGTCGCATGTCGGGTTGACGATGACCGATGTGGAAGAGCACGGCTCGCTGGAGGCTGATCTGCAAGCGGTGCTC
CTCGCCATCCGCCGCGTTCTGAGGCATCCCAAGGTGCGACGGATTCTGACCGACCTTCATGGCGAGATCGAGCGGACGCC
GGCATTGGAAATGGCGATCCGGCCTTTCCAGCGCGCACGGCGCGAGCGGATCAATGGCCTGATTAATCGGGCGATCAAAC
GCCGGGAAGTGTCGCCCTTGGTGGACCGTGAGATGGCGGCCGACCTCATCGCAGCCCCGTTATACTGGCGGATCGCGGTA
TTGGGGGGACGATCGGATCGCGCCTACATCAAGCGGCTTGCCCTCGTCACGGGCGCCGCGCTTCGCGCAAGCGCGCCTTC
GTAA

Upstream 100 bases:

>100_bases
ACGGTAGCGTTCCGCTGAGATATATAGGAAGGCATCGATGGAACACAAGCGTTCCGACGGAAATCCGAAAGCAGCCCGTG
TTCTCAGCGGAGCAGCGGTC

Downstream 100 bases:

>100_bases
TTTGCCTTCCAGATCGGCCCATCACGTCCGCAAATTGCGAGCCCTACCCGTCGCCACTTTTCCCGCGTTCCACCCCCCGT
TCGTGCAATTCGGCGTCGAT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Protein Transcriptional Regulator; TetR-Family Transcriptional Regulator Domain Protein; LOW QUALITY PROTEIN TetR-Family Transcriptional Regulator; TetR Family Regulatory Protein

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRADVTNALTRSFFEEWARTGYAGLSLERVARTAGVGKAALYRRWPDKVSMASDLLSHVGLTMTDVEEHGSLEADLQAVL
LAIRRVLRHPKVRRILTDLHGEIERTPALEMAIRPFQRARRERINGLINRAIKRREVSPLVDREMAADLIAAPLYWRIAV
LGGRSDRAYIKRLALVTGAALRASAPS

Sequences:

>Translated_187_residues
MRADVTNALTRSFFEEWARTGYAGLSLERVARTAGVGKAALYRRWPDKVSMASDLLSHVGLTMTDVEEHGSLEADLQAVL
LAIRRVLRHPKVRRILTDLHGEIERTPALEMAIRPFQRARRERINGLINRAIKRREVSPLVDREMAADLIAAPLYWRIAV
LGGRSDRAYIKRLALVTGAALRASAPS
>Mature_187_residues
MRADVTNALTRSFFEEWARTGYAGLSLERVARTAGVGKAALYRRWPDKVSMASDLLSHVGLTMTDVEEHGSLEADLQAVL
LAIRRVLRHPKVRRILTDLHGEIERTPALEMAIRPFQRARRERINGLINRAIKRREVSPLVDREMAADLIAAPLYWRIAV
LGGRSDRAYIKRLALVTGAALRASAPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20948; Mature: 20948

Theoretical pI: Translated: 11.43; Mature: 11.43

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRADVTNALTRSFFEEWARTGYAGLSLERVARTAGVGKAALYRRWPDKVSMASDLLSHVG
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCC
LTMTDVEEHGSLEADLQAVLLAIRRVLRHPKVRRILTDLHGEIERTPALEMAIRPFQRAR
CCHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RERINGLINRAIKRREVSPLVDREMAADLIAAPLYWRIAVLGGRSDRAYIKRLALVTGAA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LRASAPS
HHCCCCC
>Mature Secondary Structure
MRADVTNALTRSFFEEWARTGYAGLSLERVARTAGVGKAALYRRWPDKVSMASDLLSHVG
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCC
LTMTDVEEHGSLEADLQAVLLAIRRVLRHPKVRRILTDLHGEIERTPALEMAIRPFQRAR
CCHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RERINGLINRAIKRREVSPLVDREMAADLIAAPLYWRIAVLGGRSDRAYIKRLALVTGAA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LRASAPS
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA